RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 BLMP54132 1417 aaPredicted RBP24.98■■□□□ 1.59
PFN1-202ENST00000572383 FAM98CQ17RN3 349 aaKnown RBP24.98■■□□□ 1.59
PFN1-202ENST00000572383 GGNBP2Q9H3C7 697 aa24.98■■□□□ 1.59
PFN1-202ENST00000572383 CAMTA1Q9Y6Y1 1673 aa24.97■■□□□ 1.59
PFN1-202ENST00000572383 COG3Q96JB2 828 aa24.97■■□□□ 1.59
PFN1-202ENST00000572383 TNS1Q9HBL0 1735 aaKnown RBP24.97■■□□□ 1.59
PFN1-202ENST00000572383 NFAT5O94916 1531 aa24.96■■□□□ 1.59
PFN1-202ENST00000572383 KIF20BQ96Q89 1820 aa24.96■■□□□ 1.59
PFN1-202ENST00000572383 COL18A1P39060 1754 aa24.96■■□□□ 1.59
PFN1-202ENST00000572383 A0A0G2JS52 829 aa24.96■■□□□ 1.59
PFN1-202ENST00000572383 ZBTB7CA1YPR0 619 aa24.96■■□□□ 1.59
PFN1-202ENST00000572383 MYT1Q01538 1121 aa24.96■■□□□ 1.59
PFN1-202ENST00000572383 KRT27Q7Z3Y8 459 aa24.96■■□□□ 1.59
PFN1-202ENST00000572383 SPATA31A1Q5TZJ5 1347 aa24.95■■□□□ 1.58
PFN1-202ENST00000572383 STRN4Q9NRL3 753 aa24.95■■□□□ 1.58
PFN1-202ENST00000572383 EVA1CP58658 441 aa24.93■■□□□ 1.58
PFN1-202ENST00000572383 ARHGEF25Q86VW2 580 aa24.93■■□□□ 1.58
PFN1-202ENST00000572383 WNK3Q9BYP7 1800 aa24.93■■□□□ 1.58
PFN1-202ENST00000572383 CGNL1Q0VF96 1302 aa24.92■■□□□ 1.58
PFN1-202ENST00000572383 AATKQ6ZMQ8 1374 aa24.9■■□□□ 1.58
PFN1-202ENST00000572383 COL5A2P05997 1499 aaPredicted RBP24.89■■□□□ 1.58
PFN1-202ENST00000572383 PARP4Q9UKK3 1724 aaKnown RBP24.89■■□□□ 1.58
PFN1-202ENST00000572383 FBLN1P23142 703 aa24.89■■□□□ 1.58
PFN1-202ENST00000572383 DEFB132Q7Z7B7 95 aa24.88■■□□□ 1.57
PFN1-202ENST00000572383 LARP1Q6PKG0 1096 aaKnown RBP24.87■■□□□ 1.57
PFN1-202ENST00000572383 BARGINQ6ZT62 677 aa24.87■■□□□ 1.57
PFN1-202ENST00000572383 LTN1O94822 1766 aa24.86■■□□□ 1.57
PFN1-202ENST00000572383 FAM182BQ5T319 152 aa24.86■■□□□ 1.57
PFN1-202ENST00000572383 AXIN2Q9Y2T1 843 aa24.86■■□□□ 1.57
PFN1-202ENST00000572383 KNSTRNQ9Y448 316 aa24.86■■□□□ 1.57
PFN1-202ENST00000572383 SF3B2Q13435 895 aaKnown RBP24.85■■□□□ 1.57
PFN1-202ENST00000572383 USP35Q9P2H5 1018 aa24.85■■□□□ 1.57
PFN1-202ENST00000572383 TCP11L2Q8N4U5 519 aa24.84■■□□□ 1.57
PFN1-202ENST00000572383 THRAP3Q9Y2W1 955 aaKnown RBP24.84■■□□□ 1.57
PFN1-202ENST00000572383 SBF2Q86WG5 1849 aa24.84■■□□□ 1.57
PFN1-202ENST00000572383 PER1O15534 1290 aaPredicted RBP24.83■■□□□ 1.57
PFN1-202ENST00000572383 CRB1P82279 1406 aa24.83■■□□□ 1.57
PFN1-202ENST00000572383 ANKRD26Q9UPS8 1709 aa24.82■■□□□ 1.56
PFN1-202ENST00000572383 MAP3K19Q56UN5 1328 aa24.82■■□□□ 1.56
PFN1-202ENST00000572383 RRS1Q15050 365 aaKnown RBP24.81■■□□□ 1.56
PFN1-202ENST00000572383 ABCC6O95255 1503 aa24.81■■□□□ 1.56
PFN1-202ENST00000572383 NSD2O96028 1365 aa24.8■■□□□ 1.56
PFN1-202ENST00000572383 AMER1Q5JTC6 1135 aaPredicted RBP24.8■■□□□ 1.56
PFN1-202ENST00000572383 LRRC37A3O60309 1634 aa24.79■■□□□ 1.56
PFN1-202ENST00000572383 SRCAPQ6ZRS2 3230 aa24.79■■□□□ 1.56
PFN1-202ENST00000572383 PEAK1Q9H792 1746 aa24.78■■□□□ 1.56
PFN1-202ENST00000572383 IP6K1Q92551 441 aa24.77■■□□□ 1.56
PFN1-202ENST00000572383 WDR17Q8IZU2 1322 aa24.77■■□□□ 1.56
PFN1-202ENST00000572383 RREB1Q92766 1687 aa24.76■■□□□ 1.55
PFN1-202ENST00000572383 TNNT2P45379 298 aaPredicted RBP24.76■■□□□ 1.55
PFN1-202ENST00000572383 AMPHP49418 695 aa24.76■■□□□ 1.55
PFN1-202ENST00000572383 HOXC9P31274 260 aa24.75■■□□□ 1.55
PFN1-202ENST00000572383 PDE3BQ13370 1112 aa24.75■■□□□ 1.55
PFN1-202ENST00000572383 FAM196AQ6ZSG2 479 aa24.75■■□□□ 1.55
PFN1-202ENST00000572383 TOM1L2Q6ZVM7 507 aa24.75■■□□□ 1.55
PFN1-202ENST00000572383 MORC1Q86VD1 984 aa24.75■■□□□ 1.55
PFN1-202ENST00000572383 BAG6P46379 1132 aa24.74■■□□□ 1.55
PFN1-202ENST00000572383 DISP2A7MBM2 1401 aa24.73■■□□□ 1.55
PFN1-202ENST00000572383 CSB-PGBD3P0DP91 1061 aa24.73■■□□□ 1.55
PFN1-202ENST00000572383 CC2D1BQ5T0F9 858 aaKnown RBP24.73■■□□□ 1.55
PFN1-202ENST00000572383 EMILIN1Q9Y6C2 1016 aa24.73■■□□□ 1.55
PFN1-202ENST00000572383 RTL1A6NKG5 1358 aa24.72■■□□□ 1.55
PFN1-202ENST00000572383 ERBB3P21860 1342 aa24.72■■□□□ 1.55
PFN1-202ENST00000572383 CNGB1Q14028 1251 aaPredicted RBP24.72■■□□□ 1.55
PFN1-202ENST00000572383 ANKRD24Q8TF21 1146 aa24.72■■□□□ 1.55
PFN1-202ENST00000572383 NUP188Q5SRE5 1749 aa24.72■■□□□ 1.55
PFN1-202ENST00000572383 EN1Q05925 392 aaPredicted RBP24.7■■□□□ 1.54
PFN1-202ENST00000572383 LTV1Q96GA3 475 aaPredicted RBP24.7■■□□□ 1.54
PFN1-202ENST00000572383 POLKQ9UBT6 870 aa24.7■■□□□ 1.54
PFN1-202ENST00000572383 LRP5O75197 1615 aa24.69■■□□□ 1.54
PFN1-202ENST00000572383 PPM1GO15355 546 aaPredicted RBP24.69■■□□□ 1.54
PFN1-202ENST00000572383 CDCA7Q9BWT1 371 aaPredicted RBP24.69■■□□□ 1.54
PFN1-202ENST00000572383 CARD10Q9BWT7 1032 aa24.69■■□□□ 1.54
PFN1-202ENST00000572383 MAP2P11137 1827 aaKnown RBP24.69■■□□□ 1.54
PFN1-202ENST00000572383 FLT4P35916 1363 aa24.68■■□□□ 1.54
PFN1-202ENST00000572383 KIF24Q5T7B8 1368 aa24.68■■□□□ 1.54
PFN1-202ENST00000572383 NPC1L1Q9UHC9 1359 aa24.68■■□□□ 1.54
PFN1-202ENST00000572383 HSP90AB2PQ58FF8 381 aa24.68■■□□□ 1.54
PFN1-202ENST00000572383 DDX10Q13206 875 aaKnown RBP24.67■■□□□ 1.54
PFN1-202ENST00000572383 TRIM37O94972 964 aa24.66■■□□□ 1.54
PFN1-202ENST00000572383 DDB1Q16531 1140 aa24.65■■□□□ 1.54
PFN1-202ENST00000572383 NLRP2Q9NX02 1062 aa24.65■■□□□ 1.54
PFN1-202ENST00000572383 INSRP06213 1382 aa24.65■■□□□ 1.54
PFN1-202ENST00000572383 RGPD3A6NKT7 1758 aaPredicted RBP24.65■■□□□ 1.54
PFN1-202ENST00000572383 RGPD4Q7Z3J3 1758 aa24.65■■□□□ 1.54
PFN1-202ENST00000572383 OVOS2A0A0G2JMS6 1433 aa24.63■■□□□ 1.53
PFN1-202ENST00000572383 RGPD2P0DJD1 1756 aa24.62■■□□□ 1.53
PFN1-202ENST00000572383 SMG6Q86US8 1419 aaKnown RBP24.62■■□□□ 1.53
PFN1-202ENST00000572383 ZNF316A6NFI3 1004 aaPredicted RBP24.62■■□□□ 1.53
PFN1-202ENST00000572383 EZH2Q15910 746 aaKnown RBP24.62■■□□□ 1.53
PFN1-202ENST00000572383 FAM208AQ9UK61 1670 aaKnown RBP24.62■■□□□ 1.53
PFN1-202ENST00000572383 PARD3Q8TEW0 1356 aa24.6■■□□□ 1.53
PFN1-202ENST00000572383 PSDA5PKW4 1024 aaPredicted RBP24.6■■□□□ 1.53
PFN1-202ENST00000572383 CAMKK2Q96RR4 588 aa24.6■■□□□ 1.53
PFN1-202ENST00000572383 APBA3O96018 575 aa24.58■■□□□ 1.53
PFN1-202ENST00000572383 NBPF6Q5VWK0 638 aa24.58■■□□□ 1.53
PFN1-202ENST00000572383 NBPF4Q96M43 638 aa24.58■■□□□ 1.53
PFN1-202ENST00000572383 BCL9O00512 1426 aa24.56■■□□□ 1.52
PFN1-202ENST00000572383 EXOC5O00471 708 aa24.55■■□□□ 1.52
PFN1-202ENST00000572383 MTHFSP49914 203 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms