RNA–Protein interactions for RNA: ENST00000572152.5

ABR-216, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-216ENST00000572152 CRB1P82279 1406 aa14.02□□□□□ -0.16
ABR-216ENST00000572152 TMF1P82094 1093 aa14.02□□□□□ -0.17
ABR-216ENST00000572152 DEFB132Q7Z7B7 95 aa14.02□□□□□ -0.17
ABR-216ENST00000572152 CCER1Q8TC90 406 aaPredicted RBP14.02□□□□□ -0.17
ABR-216ENST00000572152 COL18A1P39060 1754 aa14.01□□□□□ -0.17
ABR-216ENST00000572152 TOM1L2Q6ZVM7 507 aa14.01□□□□□ -0.17
ABR-216ENST00000572152 EP400Q96L91 3159 aa14□□□□□ -0.17
ABR-216ENST00000572152 WDR17Q8IZU2 1322 aa14□□□□□ -0.17
ABR-216ENST00000572152 PDE3BQ13370 1112 aa14□□□□□ -0.17
ABR-216ENST00000572152 BAG6P46379 1132 aa13.99□□□□□ -0.17
ABR-216ENST00000572152 FAM196AQ6ZSG2 479 aa13.99□□□□□ -0.17
ABR-216ENST00000572152 USP54Q70EL1 1684 aa13.98□□□□□ -0.17
ABR-216ENST00000572152 CSB-PGBD3P0DP91 1061 aa13.98□□□□□ -0.17
ABR-216ENST00000572152 CDCA8Q53HL2 280 aa13.98□□□□□ -0.17
ABR-216ENST00000572152 OVOS2A0A0J9YW53 1432 aa13.98□□□□□ -0.17
ABR-216ENST00000572152 OVOS2Q6IE36 1432 aa13.98□□□□□ -0.17
ABR-216ENST00000572152 ANKRD36BQ8N2N9 1353 aa13.97□□□□□ -0.17
ABR-216ENST00000572152 ABCC6O95255 1503 aa13.97□□□□□ -0.17
ABR-216ENST00000572152 TRIM37O94972 964 aa13.96□□□□□ -0.17
ABR-216ENST00000572152 CARD10Q9BWT7 1032 aa13.96□□□□□ -0.17
ABR-216ENST00000572152 EN1Q05925 392 aaPredicted RBP13.95□□□□□ -0.18
ABR-216ENST00000572152 COG3Q96JB2 828 aa13.95□□□□□ -0.18
ABR-216ENST00000572152 DDB1Q16531 1140 aa13.94□□□□□ -0.18
ABR-216ENST00000572152 CDCA7Q9BWT1 371 aaPredicted RBP13.94□□□□□ -0.18
ABR-216ENST00000572152 PARP4Q9UKK3 1724 aaKnown RBP13.94□□□□□ -0.18
ABR-216ENST00000572152 RGPD1P0DJD0 1748 aa13.93□□□□□ -0.18
ABR-216ENST00000572152 DISP2A7MBM2 1401 aa13.93□□□□□ -0.18
ABR-216ENST00000572152 RGPD5Q99666 1765 aa13.93□□□□□ -0.18
ABR-216ENST00000572152 CCDC7Q96M83 1385 aa13.93□□□□□ -0.18
ABR-216ENST00000572152 ERBB3P21860 1342 aa13.92□□□□□ -0.18
ABR-216ENST00000572152 C11orf95C9JLR9 678 aaPredicted RBP13.92□□□□□ -0.18
ABR-216ENST00000572152 FYB1O15117 783 aa13.92□□□□□ -0.18
ABR-216ENST00000572152 ANKRD24Q8TF21 1146 aa13.92□□□□□ -0.18
ABR-216ENST00000572152 NLRP2Q9NX02 1062 aa13.92□□□□□ -0.18
ABR-216ENST00000572152 LRRC37A3O60309 1634 aa13.91□□□□□ -0.18
ABR-216ENST00000572152 TNS1Q9HBL0 1735 aaKnown RBP13.91□□□□□ -0.18
ABR-216ENST00000572152 APBA3O96018 575 aa13.91□□□□□ -0.18
ABR-216ENST00000572152 IP6K1Q92551 441 aa13.91□□□□□ -0.18
ABR-216ENST00000572152 GGNBP2Q9H3C7 697 aa13.91□□□□□ -0.18
ABR-216ENST00000572152 MAP3K19Q56UN5 1328 aa13.9□□□□□ -0.18
ABR-216ENST00000572152 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.18
ABR-216ENST00000572152 FBLN1P23142 703 aa13.9□□□□□ -0.18
ABR-216ENST00000572152 EIF4G2P78344 907 aaKnown RBP eCLIP13.9□□□□□ -0.18
ABR-216ENST00000572152 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.18
ABR-216ENST00000572152 MARCH10Q8NA82 808 aaPredicted RBP13.9□□□□□ -0.18
ABR-216ENST00000572152 CAMKK2Q96RR4 588 aa13.9□□□□□ -0.18
ABR-216ENST00000572152 LTN1O94822 1766 aa13.9□□□□□ -0.18
ABR-216ENST00000572152 EXOC5O00471 708 aa13.89□□□□□ -0.19
ABR-216ENST00000572152 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
ABR-216ENST00000572152 CARD14Q9BXL6 1004 aa13.89□□□□□ -0.19
ABR-216ENST00000572152 WNK3Q9BYP7 1800 aa13.88□□□□□ -0.19
ABR-216ENST00000572152 PEAK1Q9H792 1746 aa13.88□□□□□ -0.19
ABR-216ENST00000572152 HOXC9P31274 260 aa13.88□□□□□ -0.19
ABR-216ENST00000572152 AMPHP49418 695 aa13.88□□□□□ -0.19
ABR-216ENST00000572152 LTV1Q96GA3 475 aaPredicted RBP13.88□□□□□ -0.19
ABR-216ENST00000572152 PARD3Q8TEW0 1356 aa13.87□□□□□ -0.19
ABR-216ENST00000572152 IL2RBP14784 551 aa13.87□□□□□ -0.19
ABR-216ENST00000572152 POLR3GLQ9BT43 218 aa13.87□□□□□ -0.19
ABR-216ENST00000572152 NSD3Q9BZ95 1437 aa13.87□□□□□ -0.19
ABR-216ENST00000572152 MYOM1P52179 1685 aa13.86□□□□□ -0.19
ABR-216ENST00000572152 PSDA5PKW4 1024 aaPredicted RBP13.86□□□□□ -0.19
ABR-216ENST00000572152 RRS1Q15050 365 aaKnown RBP13.86□□□□□ -0.19
ABR-216ENST00000572152 BCL9O00512 1426 aa13.86□□□□□ -0.19
ABR-216ENST00000572152 TNS2Q63HR2 1409 aa13.86□□□□□ -0.19
ABR-216ENST00000572152 RTL1A6NKG5 1358 aa13.84□□□□□ -0.19
ABR-216ENST00000572152 PTF1AQ7RTS3 328 aa13.84□□□□□ -0.19
ABR-216ENST00000572152 BCL11BQ9C0K0 894 aaPredicted RBP13.84□□□□□ -0.19
ABR-216ENST00000572152 R3HDM1Q15032 1099 aaKnown RBP13.83□□□□□ -0.2
ABR-216ENST00000572152 PLSCR1O15162 318 aa13.82□□□□□ -0.2
ABR-216ENST00000572152 KIF20BQ96Q89 1820 aa13.82□□□□□ -0.2
ABR-216ENST00000572152 CGNL1Q0VF96 1302 aa13.82□□□□□ -0.2
ABR-216ENST00000572152 FAM208AQ9UK61 1670 aaKnown RBP13.81□□□□□ -0.2
ABR-216ENST00000572152 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
ABR-216ENST00000572152 HSP90AB2PQ58FF8 381 aa13.8□□□□□ -0.2
ABR-216ENST00000572152 NBPF6Q5VWK0 638 aa13.8□□□□□ -0.2
ABR-216ENST00000572152 NBPF4Q96M43 638 aa13.8□□□□□ -0.2
ABR-216ENST00000572152 INSRP06213 1382 aa13.8□□□□□ -0.2
ABR-216ENST00000572152 FLT4P35916 1363 aa13.8□□□□□ -0.2
ABR-216ENST00000572152 KIF24Q5T7B8 1368 aa13.8□□□□□ -0.2
ABR-216ENST00000572152 RREB1Q92766 1687 aa13.79□□□□□ -0.2
ABR-216ENST00000572152 KCNQ2O43526 872 aa13.79□□□□□ -0.2
ABR-216ENST00000572152 NBPF14Q5TI25 921 aa13.79□□□□□ -0.2
ABR-216ENST00000572152 PANK3Q9H999 370 aa13.79□□□□□ -0.2
ABR-216ENST00000572152 EMILIN1Q9Y6C2 1016 aa13.79□□□□□ -0.2
ABR-216ENST00000572152 SMG6Q86US8 1419 aaKnown RBP13.79□□□□□ -0.2
ABR-216ENST00000572152 DDX54Q8TDD1 881 aaKnown RBP13.78□□□□□ -0.2
ABR-216ENST00000572152 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
ABR-216ENST00000572152 NUP188Q5SRE5 1749 aa13.78□□□□□ -0.2
ABR-216ENST00000572152 PROM2Q8N271 834 aa13.77□□□□□ -0.21
ABR-216ENST00000572152 USHBP1Q8N6Y0 703 aa13.77□□□□□ -0.21
ABR-216ENST00000572152 MEGF6O75095 1541 aa13.76□□□□□ -0.21
ABR-216ENST00000572152 PPM1GO15355 546 aaPredicted RBP13.76□□□□□ -0.21
ABR-216ENST00000572152 ZCRB1Q8TBF4 217 aaKnown RBP13.76□□□□□ -0.21
ABR-216ENST00000572152 RGPD3A6NKT7 1758 aaPredicted RBP13.76□□□□□ -0.21
ABR-216ENST00000572152 RGPD4Q7Z3J3 1758 aa13.76□□□□□ -0.21
ABR-216ENST00000572152 TXNRD1Q16881 649 aa13.75□□□□□ -0.21
ABR-216ENST00000572152 RAPGEF4Q8WZA2 1011 aa13.75□□□□□ -0.21
ABR-216ENST00000572152 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
ABR-216ENST00000572152 LRP5O75197 1615 aa13.75□□□□□ -0.21
ABR-216ENST00000572152 WASHC2AQ641Q2 1341 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms