RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 EZH2Q15910 746 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-204ENST00000570324 NME9Q86XW9 330 aa12.54□□□□□ -0.4
NPLOC4-204ENST00000570324 PUS7Q96PZ0 661 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-204ENST00000570324 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
NPLOC4-204ENST00000570324 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
NPLOC4-204ENST00000570324 CDCA7Q9BWT1 371 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-204ENST00000570324 USP31Q70CQ4 1352 aa12.52□□□□□ -0.41
NPLOC4-204ENST00000570324 EDC4Q6P2E9 1401 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-204ENST00000570324 TNS1Q9HBL0 1735 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-204ENST00000570324 PARP4Q9UKK3 1724 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-204ENST00000570324 COL18A1P39060 1754 aa12.51□□□□□ -0.41
NPLOC4-204ENST00000570324 TMF1P82094 1093 aa12.51□□□□□ -0.41
NPLOC4-204ENST00000570324 CARD10Q9BWT7 1032 aa12.51□□□□□ -0.41
NPLOC4-204ENST00000570324 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
NPLOC4-204ENST00000570324 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
NPLOC4-204ENST00000570324 EXOC5O00471 708 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 R3HDM1Q15032 1099 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 NBPF14Q5TI25 921 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 CAMKK2Q96RR4 588 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 TESK2Q96S53 571 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 NLRP2Q9NX02 1062 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 NINLQ9Y2I6 1382 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 OVOS2A0A0G2JMS6 1433 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 OVOS2A0A0J9YW53 1432 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 OVOS2Q6IE36 1432 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
NPLOC4-204ENST00000570324 NFAT5O94916 1531 aa12.49□□□□□ -0.41
NPLOC4-204ENST00000570324 USP47Q96K76 1375 aa12.49□□□□□ -0.41
NPLOC4-204ENST00000570324 COG3Q96JB2 828 aa12.49□□□□□ -0.41
NPLOC4-204ENST00000570324 EP400Q96L91 3159 aa12.49□□□□□ -0.41
NPLOC4-204ENST00000570324 CDCA8Q53HL2 280 aa12.48□□□□□ -0.41
NPLOC4-204ENST00000570324 TIMELESSQ9UNS1 1208 aa12.48□□□□□ -0.41
NPLOC4-204ENST00000570324 ABCC6O95255 1503 aa12.47□□□□□ -0.41
NPLOC4-204ENST00000570324 ANKRD24Q8TF21 1146 aa12.47□□□□□ -0.41
NPLOC4-204ENST00000570324 LTN1O94822 1766 aa12.47□□□□□ -0.41
NPLOC4-204ENST00000570324 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
NPLOC4-204ENST00000570324 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
NPLOC4-204ENST00000570324 BCL11BQ9C0K0 894 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-204ENST00000570324 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.42
NPLOC4-204ENST00000570324 USP54Q70EL1 1684 aa12.45□□□□□ -0.42
NPLOC4-204ENST00000570324 ERBB3P21860 1342 aa12.45□□□□□ -0.42
NPLOC4-204ENST00000570324 AMPHP49418 695 aa12.45□□□□□ -0.42
NPLOC4-204ENST00000570324 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-204ENST00000570324 LTV1Q96GA3 475 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-204ENST00000570324 ANKRD36BQ8N2N9 1353 aa12.44□□□□□ -0.42
NPLOC4-204ENST00000570324 IL2RBP14784 551 aa12.44□□□□□ -0.42
NPLOC4-204ENST00000570324 IP6K1Q92551 441 aa12.44□□□□□ -0.42
NPLOC4-204ENST00000570324 CCER1Q8TC90 406 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-204ENST00000570324 PEAK1Q9H792 1746 aa12.42□□□□□ -0.42
NPLOC4-204ENST00000570324 LRP5O75197 1615 aa12.42□□□□□ -0.42
NPLOC4-204ENST00000570324 PLSCR1O15162 318 aa12.42□□□□□ -0.42
NPLOC4-204ENST00000570324 POLR3GLQ9BT43 218 aa12.42□□□□□ -0.42
NPLOC4-204ENST00000570324 RREB1Q92766 1687 aa12.42□□□□□ -0.42
NPLOC4-204ENST00000570324 SBF2Q86WG5 1849 aa12.41□□□□□ -0.42
NPLOC4-204ENST00000570324 TNS2Q63HR2 1409 aa12.41□□□□□ -0.42
NPLOC4-204ENST00000570324 GGNBP2Q9H3C7 697 aa12.41□□□□□ -0.42
NPLOC4-204ENST00000570324 MAP3K19Q56UN5 1328 aa12.4□□□□□ -0.42
NPLOC4-204ENST00000570324 NUP188Q5SRE5 1749 aa12.4□□□□□ -0.42
NPLOC4-204ENST00000570324 ACSBG1Q96GR2 724 aa12.4□□□□□ -0.42
NPLOC4-204ENST00000570324 BCL9O00512 1426 aa12.39□□□□□ -0.43
NPLOC4-204ENST00000570324 FYB1O15117 783 aa12.39□□□□□ -0.43
NPLOC4-204ENST00000570324 FBLN1P23142 703 aa12.39□□□□□ -0.43
NPLOC4-204ENST00000570324 HOXC9P31274 260 aa12.39□□□□□ -0.43
NPLOC4-204ENST00000570324 PTF1AQ7RTS3 328 aa12.39□□□□□ -0.43
NPLOC4-204ENST00000570324 DDX54Q8TDD1 881 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-204ENST00000570324 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-204ENST00000570324 PPP1R1BQ9UD71 204 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-204ENST00000570324 FAM208AQ9UK61 1670 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-204ENST00000570324 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-204ENST00000570324 KCNQ2O43526 872 aa12.37□□□□□ -0.43
NPLOC4-204ENST00000570324 TXNRD1Q16881 649 aa12.37□□□□□ -0.43
NPLOC4-204ENST00000570324 STK32BQ9NY57 414 aa12.37□□□□□ -0.43
NPLOC4-204ENST00000570324 RGPD3A6NKT7 1758 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-204ENST00000570324 RGPD4Q7Z3J3 1758 aa12.37□□□□□ -0.43
NPLOC4-204ENST00000570324 KAT6BQ8WYB5 2073 aa12.37□□□□□ -0.43
NPLOC4-204ENST00000570324 RTL1A6NKG5 1358 aa12.36□□□□□ -0.43
NPLOC4-204ENST00000570324 EIF4G2P78344 907 aaKnown RBP eCLIP12.36□□□□□ -0.43
NPLOC4-204ENST00000570324 SPON1Q9HCB6 807 aa12.36□□□□□ -0.43
NPLOC4-204ENST00000570324 KIF20BQ96Q89 1820 aa12.35□□□□□ -0.43
NPLOC4-204ENST00000570324 SYTL4Q96C24 671 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-204ENST00000570324 PROM2Q8N271 834 aa12.34□□□□□ -0.43
NPLOC4-204ENST00000570324 ZCRB1Q8TBF4 217 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-204ENST00000570324 RAPGEF4Q8WZA2 1011 aa12.34□□□□□ -0.43
NPLOC4-204ENST00000570324 NHSQ6T4R5 1651 aa12.34□□□□□ -0.43
NPLOC4-204ENST00000570324 NSD3Q9BZ95 1437 aa12.34□□□□□ -0.43
NPLOC4-204ENST00000570324 DCAF8L1A6NGE4 600 aa12.33□□□□□ -0.44
NPLOC4-204ENST00000570324 PPM1GO15355 546 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-204ENST00000570324 TATP17735 454 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-204ENST00000570324 CARD14Q9BXL6 1004 aa12.33□□□□□ -0.44
NPLOC4-204ENST00000570324 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-204ENST00000570324 CGNL1Q0VF96 1302 aa12.33□□□□□ -0.44
NPLOC4-204ENST00000570324 FLT4P35916 1363 aa12.32□□□□□ -0.44
NPLOC4-204ENST00000570324 SLC15A2Q16348 729 aa12.32□□□□□ -0.44
NPLOC4-204ENST00000570324 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
NPLOC4-204ENST00000570324 NBPF6Q5VWK0 638 aa12.32□□□□□ -0.44
NPLOC4-204ENST00000570324 USHBP1Q8N6Y0 703 aa12.32□□□□□ -0.44
NPLOC4-204ENST00000570324 NBPF4Q96M43 638 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms