RNA–Protein interactions for RNA: ENST00000568900.5

SPNS1-212, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 2

Gene SPNS1, Length 2,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-212ENST00000568900 FLT4P35916 1363 aa27.24■■□□□ 1.95
SPNS1-212ENST00000568900 NCOA3Q9Y6Q9 1424 aa27.23■■□□□ 1.95
SPNS1-212ENST00000568900 AMPHP49418 695 aa27.23■■□□□ 1.95
SPNS1-212ENST00000568900 XPCQ01831 940 aaPredicted RBP27.23■■□□□ 1.95
SPNS1-212ENST00000568900 KIF1AQ12756 1690 aa27.23■■□□□ 1.95
SPNS1-212ENST00000568900 DCCP43146 1447 aa27.21■■□□□ 1.95
SPNS1-212ENST00000568900 MST1RQ04912 1400 aa27.2■■□□□ 1.95
SPNS1-212ENST00000568900 RGPD1P0DJD0 1748 aa27.2■■□□□ 1.94
SPNS1-212ENST00000568900 NFE2L2Q16236 605 aa27.2■■□□□ 1.94
SPNS1-212ENST00000568900 B4GALNT3Q6L9W6 998 aa27.2■■□□□ 1.94
SPNS1-212ENST00000568900 MYH16Q9H6N6 1097 aa27.2■■□□□ 1.94
SPNS1-212ENST00000568900 SULT6B1Q6IMI4 303 aa27.19■■□□□ 1.94
SPNS1-212ENST00000568900 AEBP1Q8IUX7 1158 aa27.19■■□□□ 1.94
SPNS1-212ENST00000568900 XIRP1Q702N8 1843 aaKnown RBP27.17■■□□□ 1.94
SPNS1-212ENST00000568900 TRPM3Q9HCF6 1732 aaPredicted RBP27.16■■□□□ 1.94
SPNS1-212ENST00000568900 LTN1O94822 1766 aa27.16■■□□□ 1.94
SPNS1-212ENST00000568900 EXOC6Q8TAG9 804 aa27.16■■□□□ 1.94
SPNS1-212ENST00000568900 MSH6P52701 1360 aa27.15■■□□□ 1.94
SPNS1-212ENST00000568900 KRT28Q7Z3Y7 464 aa27.15■■□□□ 1.94
SPNS1-212ENST00000568900 DLG5Q8TDM6 1919 aa27.15■■□□□ 1.94
SPNS1-212ENST00000568900 KIF24Q5T7B8 1368 aa27.15■■□□□ 1.94
SPNS1-212ENST00000568900 HOXC9P31274 260 aa27.15■■□□□ 1.94
SPNS1-212ENST00000568900 CADPS2Q86UW7 1296 aa27.15■■□□□ 1.94
SPNS1-212ENST00000568900 IL16Q14005 1332 aa27.14■■□□□ 1.93
SPNS1-212ENST00000568900 TSR2Q969E8 191 aaKnown RBP27.14■■□□□ 1.93
SPNS1-212ENST00000568900 NFAT5O94916 1531 aa27.13■■□□□ 1.93
SPNS1-212ENST00000568900 BCAR3O75815 825 aa27.13■■□□□ 1.93
SPNS1-212ENST00000568900 LMOD2Q6P5Q4 547 aa27.13■■□□□ 1.93
SPNS1-212ENST00000568900 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.13■■□□□ 1.93
SPNS1-212ENST00000568900 ARHGEF10O15013 1369 aa27.13■■□□□ 1.93
SPNS1-212ENST00000568900 ZNF335Q9H4Z2 1342 aaPredicted RBP27.13■■□□□ 1.93
SPNS1-212ENST00000568900 FANCIQ9NVI1 1328 aa27.13■■□□□ 1.93
SPNS1-212ENST00000568900 C20orf194Q5TEA3 1177 aa27.11■■□□□ 1.93
SPNS1-212ENST00000568900 KCNH5Q8NCM2 988 aa27.1■■□□□ 1.93
SPNS1-212ENST00000568900 PLEKHG5O94827 1062 aa27.1■■□□□ 1.93
SPNS1-212ENST00000568900 CCDC136Q96JN2 1154 aa27.09■■□□□ 1.93
SPNS1-212ENST00000568900 CRBNQ96SW2 442 aa27.09■■□□□ 1.93
SPNS1-212ENST00000568900 EYA1Q99502 592 aa27.09■■□□□ 1.93
SPNS1-212ENST00000568900 RTL1A6NKG5 1358 aa27.09■■□□□ 1.93
SPNS1-212ENST00000568900 DDX17Q92841 729 aaKnown RBP27.07■■□□□ 1.92
SPNS1-212ENST00000568900 THUMPD2Q9BTF0 503 aaKnown RBP27.07■■□□□ 1.92
SPNS1-212ENST00000568900 IGSF1Q8N6C5 1336 aa27.07■■□□□ 1.92
SPNS1-212ENST00000568900 ZBTB7CA1YPR0 619 aa27.06■■□□□ 1.92
SPNS1-212ENST00000568900 LMOD3Q0VAK6 560 aa27.06■■□□□ 1.92
SPNS1-212ENST00000568900 LTV1Q96GA3 475 aaPredicted RBP27.06■■□□□ 1.92
SPNS1-212ENST00000568900 SLIT3O75094 1523 aa27.05■■□□□ 1.92
SPNS1-212ENST00000568900 RARSP54136 660 aaKnown RBP27.05■■□□□ 1.92
SPNS1-212ENST00000568900 EXOSC9Q06265 439 aaKnown RBP27.05■■□□□ 1.92
SPNS1-212ENST00000568900 ALS2Q96Q42 1657 aa27.05■■□□□ 1.92
SPNS1-212ENST00000568900 KDRP35968 1356 aa27.04■■□□□ 1.92
SPNS1-212ENST00000568900 GCP02774 474 aa27.04■■□□□ 1.92
SPNS1-212ENST00000568900 IP6K1Q92551 441 aa27.04■■□□□ 1.92
SPNS1-212ENST00000568900 LAS1LQ9Y4W2 734 aaKnown RBP27.04■■□□□ 1.92
SPNS1-212ENST00000568900 CALD1Q05682 793 aaKnown RBP27.04■■□□□ 1.92
SPNS1-212ENST00000568900 FAM83GA6ND36 823 aa27.02■■□□□ 1.92
SPNS1-212ENST00000568900 USP19O94966 1318 aa27.02■■□□□ 1.92
SPNS1-212ENST00000568900 PHRF1Q9P1Y6 1649 aaKnown RBP27.02■■□□□ 1.92
SPNS1-212ENST00000568900 NPHP3Q7Z494 1330 aa27.01■■□□□ 1.91
SPNS1-212ENST00000568900 CT47B1P0C2W7 299 aaPredicted RBP27■■□□□ 1.91
SPNS1-212ENST00000568900 CANXP27824 592 aaKnown RBP27■■□□□ 1.91
SPNS1-212ENST00000568900 DCTN1Q14203 1278 aa27■■□□□ 1.91
SPNS1-212ENST00000568900 BCL2L13Q9BXK5 485 aa27■■□□□ 1.91
SPNS1-212ENST00000568900 ARHGEF25Q86VW2 580 aa26.98■■□□□ 1.91
SPNS1-212ENST00000568900 IFT57Q9NWB7 429 aa26.98■■□□□ 1.91
SPNS1-212ENST00000568900 GNAI1P63096 354 aa26.97■■□□□ 1.91
SPNS1-212ENST00000568900 FRAT1Q92837 279 aaPredicted RBP26.97■■□□□ 1.91
SPNS1-212ENST00000568900 MTHFSDQ2M296 383 aaKnown RBP26.96■■□□□ 1.91
SPNS1-212ENST00000568900 MED1Q15648 1581 aaPredicted RBP26.95■■□□□ 1.91
SPNS1-212ENST00000568900 BRINP3Q76B58 766 aa26.95■■□□□ 1.91
SPNS1-212ENST00000568900 PXDNQ92626 1479 aa26.95■■□□□ 1.9
SPNS1-212ENST00000568900 USHBP1Q8N6Y0 703 aa26.95■■□□□ 1.9
SPNS1-212ENST00000568900 ZNF853P0CG23 659 aa26.94■■□□□ 1.9
SPNS1-212ENST00000568900 TNS3Q68CZ2 1445 aa26.93■■□□□ 1.9
SPNS1-212ENST00000568900 MCM10Q7L590 875 aa26.93■■□□□ 1.9
SPNS1-212ENST00000568900 CFAP44Q96MT7 982 aa26.93■■□□□ 1.9
SPNS1-212ENST00000568900 MBIPQ9NS73 344 aa26.93■■□□□ 1.9
SPNS1-212ENST00000568900 RGPD2P0DJD1 1756 aa26.92■■□□□ 1.9
SPNS1-212ENST00000568900 SLAIN2Q9P270 581 aa26.92■■□□□ 1.9
SPNS1-212ENST00000568900 PDE3AQ14432 1141 aa26.92■■□□□ 1.9
SPNS1-212ENST00000568900 NBPF6Q5VWK0 638 aa26.91■■□□□ 1.9
SPNS1-212ENST00000568900 GAS2L2Q8NHY3 880 aa26.91■■□□□ 1.9
SPNS1-212ENST00000568900 NBPF4Q96M43 638 aa26.91■■□□□ 1.9
SPNS1-212ENST00000568900 SMC4Q9NTJ3 1288 aa26.91■■□□□ 1.9
SPNS1-212ENST00000568900 ZC3H6P61129 1189 aaKnown RBP26.9■■□□□ 1.9
SPNS1-212ENST00000568900 PANK1Q8TE04 598 aa26.89■■□□□ 1.9
SPNS1-212ENST00000568900 SSH1Q8WYL5 1049 aa26.89■■□□□ 1.9
SPNS1-212ENST00000568900 SPATA31A3Q5VYP0 1347 aa26.88■■□□□ 1.89
SPNS1-212ENST00000568900 LRRC59Q96AG4 307 aaKnown RBP26.88■■□□□ 1.89
SPNS1-212ENST00000568900 RGPD5Q99666 1765 aa26.88■■□□□ 1.89
SPNS1-212ENST00000568900 RTF1Q92541 710 aaKnown RBP26.87■■□□□ 1.89
SPNS1-212ENST00000568900 CABLES1Q8TDN4 633 aa26.86■■□□□ 1.89
SPNS1-212ENST00000568900 ANKRD24Q8TF21 1146 aa26.86■■□□□ 1.89
SPNS1-212ENST00000568900 AXIN2Q9Y2T1 843 aa26.86■■□□□ 1.89
SPNS1-212ENST00000568900 TNNQ9UQP3 1299 aa26.86■■□□□ 1.89
SPNS1-212ENST00000568900 COG6Q9Y2V7 657 aa26.85■■□□□ 1.89
SPNS1-212ENST00000568900 TSPYL6Q8N831 410 aa26.84■■□□□ 1.89
SPNS1-212ENST00000568900 TSHZ2Q9NRE2 1034 aa26.83■■□□□ 1.89
SPNS1-212ENST00000568900 CRB1P82279 1406 aa26.83■■□□□ 1.89
SPNS1-212ENST00000568900 CRYBG1Q9Y4K1 1723 aa26.83■■□□□ 1.89
SPNS1-212ENST00000568900 ZKSCAN2Q63HK3 967 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms