RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
USB1-214ENST00000568848 DDB1Q16531 1140 aa21.54■■□□□ 1.04
USB1-214ENST00000568848 PROM2Q8N271 834 aa21.54■■□□□ 1.04
USB1-214ENST00000568848 UTRNP46939 3433 aa21.54■■□□□ 1.04
USB1-214ENST00000568848 AATKQ6ZMQ8 1374 aa21.53■■□□□ 1.04
USB1-214ENST00000568848 MYOM1P52179 1685 aa21.53■■□□□ 1.04
USB1-214ENST00000568848 CPSF1Q10570 1443 aaKnown RBP21.51■■□□□ 1.03
USB1-214ENST00000568848 AKAP12Q02952 1782 aa21.51■■□□□ 1.03
USB1-214ENST00000568848 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
USB1-214ENST00000568848 BCL11BQ9C0K0 894 aaPredicted RBP21.49■■□□□ 1.03
USB1-214ENST00000568848 WDR17Q8IZU2 1322 aa21.49■■□□□ 1.03
USB1-214ENST00000568848 RGPD3A6NKT7 1758 aaPredicted RBP21.48■■□□□ 1.03
USB1-214ENST00000568848 RGPD4Q7Z3J3 1758 aa21.48■■□□□ 1.03
USB1-214ENST00000568848 CSB-PGBD3P0DP91 1061 aa21.48■■□□□ 1.03
USB1-214ENST00000568848 L3MBTL2Q969R5 705 aa21.48■■□□□ 1.03
USB1-214ENST00000568848 TTC21BQ7Z4L5 1316 aa21.48■■□□□ 1.03
USB1-214ENST00000568848 SIN3AQ96ST3 1273 aa21.47■■□□□ 1.03
USB1-214ENST00000568848 ARHGEF25Q86VW2 580 aa21.46■■□□□ 1.03
USB1-214ENST00000568848 NINLQ9Y2I6 1382 aa21.46■■□□□ 1.03
USB1-214ENST00000568848 TRPM1Q7Z4N2 1603 aa21.45■■□□□ 1.02
USB1-214ENST00000568848 PLSCR1O15162 318 aa21.45■■□□□ 1.02
USB1-214ENST00000568848 ACSBG1Q96GR2 724 aa21.45■■□□□ 1.02
USB1-214ENST00000568848 NFAT5O94916 1531 aa21.45■■□□□ 1.02
USB1-214ENST00000568848 PTGER2P43116 358 aa21.44■■□□□ 1.02
USB1-214ENST00000568848 TXNRD1Q16881 649 aa21.43■■□□□ 1.02
USB1-214ENST00000568848 EVC2Q86UK5 1308 aa21.42■■□□□ 1.02
USB1-214ENST00000568848 BRD4O60885 1362 aaPredicted RBP21.41■■□□□ 1.02
USB1-214ENST00000568848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.02
USB1-214ENST00000568848 CARD10Q9BWT7 1032 aa21.4■■□□□ 1.02
USB1-214ENST00000568848 NEUROD1Q13562 356 aa21.39■■□□□ 1.01
USB1-214ENST00000568848 NME9Q86XW9 330 aa21.38■■□□□ 1.01
USB1-214ENST00000568848 STK32BQ9NY57 414 aa21.38■■□□□ 1.01
USB1-214ENST00000568848 KTN1Q86UP2 1357 aaKnown RBP21.37■■□□□ 1.01
USB1-214ENST00000568848 SLC15A2Q16348 729 aa21.37■■□□□ 1.01
USB1-214ENST00000568848 FHDC1Q9C0D6 1143 aaPredicted RBP21.37■■□□□ 1.01
USB1-214ENST00000568848 TNS2Q63HR2 1409 aa21.37■■□□□ 1.01
USB1-214ENST00000568848 ROCK2O75116 1388 aaKnown RBP21.36■■□□□ 1.01
USB1-214ENST00000568848 MON2Q7Z3U7 1717 aa21.36■■□□□ 1.01
USB1-214ENST00000568848 EXOC5O00471 708 aa21.36■■□□□ 1.01
USB1-214ENST00000568848 NHSQ6T4R5 1651 aa21.36■■□□□ 1.01
USB1-214ENST00000568848 C11orf95C9JLR9 678 aaPredicted RBP21.35■■□□□ 1.01
USB1-214ENST00000568848 BCL9O00512 1426 aa21.35■■□□□ 1.01
USB1-214ENST00000568848 LTN1O94822 1766 aa21.34■■□□□ 1.01
USB1-214ENST00000568848 KAT6BQ8WYB5 2073 aa21.34■■□□□ 1.01
USB1-214ENST00000568848 DCAF8L1A6NGE4 600 aa21.34■■□□□ 1.01
USB1-214ENST00000568848 ZNF827Q17R98 1081 aa21.34■■□□□ 1.01
USB1-214ENST00000568848 KCNH5Q8NCM2 988 aa21.34■■□□□ 1.01
USB1-214ENST00000568848 NLRP2Q9NX02 1062 aa21.34■■□□□ 1.01
USB1-214ENST00000568848 CD163L1Q9NR16 1453 aa21.33■■□□□ 1.01
USB1-214ENST00000568848 SYT17Q9BSW7 474 aa21.33■■□□□ 1.01
USB1-214ENST00000568848 CDCA7Q9BWT1 371 aaPredicted RBP21.33■■□□□ 1.01
USB1-214ENST00000568848 BTAF1O14981 1849 aa21.33■■□□□ 1.01
USB1-214ENST00000568848 PAPPAQ13219 1627 aa21.33■■□□□ 1
USB1-214ENST00000568848 TTC21AQ8NDW8 1320 aa21.31■■□□□ 1
USB1-214ENST00000568848 KCNQ4P56696 695 aa21.31■■□□□ 1
USB1-214ENST00000568848 ZNF784Q8NCA9 323 aaPredicted RBP21.31■■□□□ 1
USB1-214ENST00000568848 SGIP1Q9BQI5 828 aa21.31■■□□□ 1
USB1-214ENST00000568848 CCDC7Q96M83 1385 aa21.31■■□□□ 1
USB1-214ENST00000568848 ZNF692Q9BU19 519 aaPredicted RBP21.3■■□□□ 1
USB1-214ENST00000568848 ERBB3P21860 1342 aa21.29■■□□□ 1
USB1-214ENST00000568848 ABCC6O95255 1503 aa21.29■■□□□ 1
USB1-214ENST00000568848 SBNO2Q9Y2G9 1366 aa21.29■■□□□ 1
USB1-214ENST00000568848 LRRC4BQ9NT99 713 aa21.29■■□□□ 1
USB1-214ENST00000568848 TMC1Q8TDI8 760 aa21.28■■□□□ 1
USB1-214ENST00000568848 ANKRD24Q8TF21 1146 aa21.28■■□□□ 1
USB1-214ENST00000568848 GOLGB1Q14789 3259 aaKnown RBP21.27■■□□□ 1
USB1-214ENST00000568848 LTV1Q96GA3 475 aaPredicted RBP21.27■■□□□ 1
USB1-214ENST00000568848 MTFR1LQ9H019 292 aa21.27■■□□□ 1
USB1-214ENST00000568848 SLC12A5Q9H2X9 1139 aa21.27■■□□□ 1
USB1-214ENST00000568848 FBLN1P23142 703 aa21.26■□□□□ 0.99
USB1-214ENST00000568848 KLHL34Q8N239 644 aa21.26■□□□□ 0.99
USB1-214ENST00000568848 USP54Q70EL1 1684 aa21.25■□□□□ 0.99
USB1-214ENST00000568848 IL2RBP14784 551 aa21.25■□□□□ 0.99
USB1-214ENST00000568848 USP31Q70CQ4 1352 aa21.24■□□□□ 0.99
USB1-214ENST00000568848 ARXQ96QS3 562 aa21.24■□□□□ 0.99
USB1-214ENST00000568848 TUBGCP6Q96RT7 1819 aa21.23■□□□□ 0.99
USB1-214ENST00000568848 DDX54Q8TDD1 881 aaKnown RBP21.22■□□□□ 0.99
USB1-214ENST00000568848 RGPD2P0DJD1 1756 aa21.21■□□□□ 0.99
USB1-214ENST00000568848 A0A1W2PP64 1363 aa21.21■□□□□ 0.99
USB1-214ENST00000568848 CHD4Q14839 1912 aa21.19■□□□□ 0.98
USB1-214ENST00000568848 PELP1Q8IZL8 1130 aaKnown RBP21.19■□□□□ 0.98
USB1-214ENST00000568848 DOT1LQ8TEK3 1739 aa21.18■□□□□ 0.98
USB1-214ENST00000568848 AKT1S1Q96B36 256 aa21.18■□□□□ 0.98
USB1-214ENST00000568848 CARD11Q9BXL7 1154 aa21.18■□□□□ 0.98
USB1-214ENST00000568848 NLGN2Q8NFZ4 835 aa21.17■□□□□ 0.98
USB1-214ENST00000568848 SYTL4Q96C24 671 aaPredicted RBP21.17■□□□□ 0.98
USB1-214ENST00000568848 PNPLA7Q6ZV29 1317 aa21.17■□□□□ 0.98
USB1-214ENST00000568848 SHANK3Q9BYB0 1731 aa21.16■□□□□ 0.98
USB1-214ENST00000568848 SENP3-EIF4A1A0A087X0R7 540 aa21.16■□□□□ 0.98
USB1-214ENST00000568848 EDC4Q6P2E9 1401 aaKnown RBP21.15■□□□□ 0.98
USB1-214ENST00000568848 HDGFL2Q7Z4V5 671 aaPredicted RBP21.15■□□□□ 0.98
USB1-214ENST00000568848 FAM208AQ9UK61 1670 aaKnown RBP21.15■□□□□ 0.98
USB1-214ENST00000568848 NSD2O96028 1365 aa21.14■□□□□ 0.98
USB1-214ENST00000568848 PRIM1P49642 420 aaKnown RBP21.14■□□□□ 0.97
USB1-214ENST00000568848 GPR162Q16538 588 aa21.14■□□□□ 0.97
USB1-214ENST00000568848 USHBP1Q8N6Y0 703 aa21.13■□□□□ 0.97
USB1-214ENST00000568848 MEGF6O75095 1541 aa21.13■□□□□ 0.97
USB1-214ENST00000568848 IP6K1Q92551 441 aa21.12■□□□□ 0.97
USB1-214ENST00000568848 MAP3K19Q56UN5 1328 aa21.11■□□□□ 0.97
USB1-214ENST00000568848 C1QTNF8P60827 252 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms