RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LYRM1-208	ENST00000567954		E9PCH4	1651 aa		11.53	□□□□□ -0.56
LYRM1-208	ENST00000567954	FMN2	Q9NZ56	1722 aa		11.53	□□□□□ -0.56
LYRM1-208	ENST00000567954	PARP4	Q9UKK3	1724 aa	Known RBP	11.53	□□□□□ -0.56
LYRM1-208	ENST00000567954	PAK3	O75914	559 aa	Predicted RBP	11.53	□□□□□ -0.56
LYRM1-208	ENST00000567954	AIDA	Q96BJ3	306 aa		11.52	□□□□□ -0.57
LYRM1-208	ENST00000567954	IGSF1	Q8N6C5	1336 aa		11.52	□□□□□ -0.57
LYRM1-208	ENST00000567954	ANKRD30B	Q9BXX2	1392 aa		11.52	□□□□□ -0.57
LYRM1-208	ENST00000567954	COL24A1	Q17RW2	1714 aa		11.52	□□□□□ -0.57
LYRM1-208	ENST00000567954	LBX1	P52954	281 aa		11.51	□□□□□ -0.57
LYRM1-208	ENST00000567954	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.51	□□□□□ -0.57
LYRM1-208	ENST00000567954	C10orf71	Q711Q0	1435 aa		11.51	□□□□□ -0.57
LYRM1-208	ENST00000567954	SIRT1	Q96EB6	747 aa		11.5	□□□□□ -0.57
LYRM1-208	ENST00000567954	RPGRIP1L	Q68CZ1	1315 aa		11.5	□□□□□ -0.57
LYRM1-208	ENST00000567954	CRB1	P82279	1406 aa		11.5	□□□□□ -0.57
LYRM1-208	ENST00000567954	TOPAZ1	Q8N9V7	1692 aa		11.49	□□□□□ -0.57
LYRM1-208	ENST00000567954	SBF2	Q86WG5	1849 aa		11.49	□□□□□ -0.57
LYRM1-208	ENST00000567954	SLC27A3	Q5K4L6	730 aa		11.49	□□□□□ -0.57
LYRM1-208	ENST00000567954	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.49	□□□□□ -0.57
LYRM1-208	ENST00000567954	RRAGC	Q9HB90	399 aa		11.49	□□□□□ -0.57
LYRM1-208	ENST00000567954	KDM2B	Q8NHM5	1336 aa		11.49	□□□□□ -0.57
LYRM1-208	ENST00000567954	PRPF38B	Q5VTL8	546 aa	Known RBP	11.48	□□□□□ -0.57
LYRM1-208	ENST00000567954	CPD	O75976	1380 aa		11.48	□□□□□ -0.57
LYRM1-208	ENST00000567954	ALS2	Q96Q42	1657 aa		11.48	□□□□□ -0.57
LYRM1-208	ENST00000567954	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.47	□□□□□ -0.57
LYRM1-208	ENST00000567954	ANKAR	Q7Z5J8	1434 aa		11.47	□□□□□ -0.57
LYRM1-208	ENST00000567954	KANK4	Q5T7N3	995 aa	Predicted RBP	11.47	□□□□□ -0.57
LYRM1-208	ENST00000567954	CLTCL1	P53675	1640 aa		11.46	□□□□□ -0.57
LYRM1-208	ENST00000567954	COL5A2	P05997	1499 aa	Predicted RBP	11.46	□□□□□ -0.57
LYRM1-208	ENST00000567954	NUP155	O75694	1391 aa		11.46	□□□□□ -0.57
LYRM1-208	ENST00000567954	MSH5	O43196	834 aa		11.46	□□□□□ -0.57
LYRM1-208	ENST00000567954	MSL1	Q68DK7	614 aa		11.46	□□□□□ -0.57
LYRM1-208	ENST00000567954	MKRN1	Q9UHC7	482 aa	Known RBP	11.46	□□□□□ -0.57
LYRM1-208	ENST00000567954	PXDNL	A1KZ92	1463 aa		11.45	□□□□□ -0.58
LYRM1-208	ENST00000567954	TNRC18	O15417	2968 aa	Predicted RBP	11.45	□□□□□ -0.58
LYRM1-208	ENST00000567954	EXOC5	O00471	708 aa		11.45	□□□□□ -0.58
LYRM1-208	ENST00000567954	NGDN	Q8NEJ9	315 aa	Known RBP	11.45	□□□□□ -0.58
LYRM1-208	ENST00000567954	ACSBG1	Q96GR2	724 aa		11.45	□□□□□ -0.58
LYRM1-208	ENST00000567954	WBP1L	Q9NX94	342 aa		11.45	□□□□□ -0.58
LYRM1-208	ENST00000567954	PLEKHG2	Q9H7P9	1386 aa		11.44	□□□□□ -0.58
LYRM1-208	ENST00000567954	TMEM132E	Q6IEE7	984 aa		11.44	□□□□□ -0.58
LYRM1-208	ENST00000567954	TOM1L2	Q6ZVM7	507 aa		11.44	□□□□□ -0.58
LYRM1-208	ENST00000567954	COL23A1	Q86Y22	540 aa	Predicted RBP	11.44	□□□□□ -0.58
LYRM1-208	ENST00000567954	CFAP44	Q96MT7	982 aa		11.44	□□□□□ -0.58
LYRM1-208	ENST00000567954	CREBZF	Q9NS37	354 aa		11.44	□□□□□ -0.58
LYRM1-208	ENST00000567954	LRRC37A3	O60309	1634 aa		11.44	□□□□□ -0.58
LYRM1-208	ENST00000567954	CIC	Q96RK0	1608 aa	Predicted RBP	11.44	□□□□□ -0.58
LYRM1-208	ENST00000567954	CRYBG1	Q9Y4K1	1723 aa		11.43	□□□□□ -0.58
LYRM1-208	ENST00000567954	HSPA8	P11142	646 aa	Known RBP	11.43	□□□□□ -0.58
LYRM1-208	ENST00000567954	NUTM2G	Q5VZR2	741 aa		11.43	□□□□□ -0.58
LYRM1-208	ENST00000567954	PDE4DIP	Q5VU43	2346 aa		11.43	□□□□□ -0.58
LYRM1-208	ENST00000567954	USP6	P35125	1406 aa		11.43	□□□□□ -0.58
LYRM1-208	ENST00000567954	C9orf131	Q5VYM1	1079 aa		11.42	□□□□□ -0.58
LYRM1-208	ENST00000567954	ARHGAP27	Q6ZUM4	889 aa		11.42	□□□□□ -0.58
LYRM1-208	ENST00000567954	KCP	Q6ZWJ8	1503 aa		11.4	□□□□□ -0.58
LYRM1-208	ENST00000567954	DLL1	O00548	723 aa		11.4	□□□□□ -0.58
LYRM1-208	ENST00000567954	CNTNAP1	P78357	1384 aa		11.4	□□□□□ -0.59
LYRM1-208	ENST00000567954	LMO7	Q8WWI1	1683 aa		11.4	□□□□□ -0.59
LYRM1-208	ENST00000567954	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.38	□□□□□ -0.59
LYRM1-208	ENST00000567954	GC	P02774	474 aa		11.38	□□□□□ -0.59
LYRM1-208	ENST00000567954	KCNQ4	P56696	695 aa		11.38	□□□□□ -0.59
LYRM1-208	ENST00000567954	ADGRF5	Q8IZF2	1346 aa		11.37	□□□□□ -0.59
LYRM1-208	ENST00000567954	PRR36	Q9H6K5	1346 aa		11.37	□□□□□ -0.59
LYRM1-208	ENST00000567954	RGPD8	O14715	1765 aa	Predicted RBP	11.37	□□□□□ -0.59
LYRM1-208	ENST00000567954	VEGFA	P15692	232 aa	Predicted RBP	11.37	□□□□□ -0.59
LYRM1-208	ENST00000567954	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
LYRM1-208	ENST00000567954	BCS1L	Q9Y276	419 aa		11.37	□□□□□ -0.59
LYRM1-208	ENST00000567954	QSER1	Q2KHR3	1735 aa		11.37	□□□□□ -0.59
LYRM1-208	ENST00000567954	VEGFB	P49765	207 aa		11.36	□□□□□ -0.59
LYRM1-208	ENST00000567954	GCC1	Q96CN9	775 aa		11.36	□□□□□ -0.59
LYRM1-208	ENST00000567954	PRAM1	Q96QH2	718 aa		11.36	□□□□□ -0.59
LYRM1-208	ENST00000567954	WDR17	Q8IZU2	1322 aa		11.35	□□□□□ -0.59
LYRM1-208	ENST00000567954	VPS8	Q8N3P4	1428 aa		11.35	□□□□□ -0.59
LYRM1-208	ENST00000567954	CARD10	Q9BWT7	1032 aa		11.35	□□□□□ -0.59
LYRM1-208	ENST00000567954	EIF3A	Q14152	1382 aa	Known RBP	11.34	□□□□□ -0.59
LYRM1-208	ENST00000567954	ABTB2	Q8N961	1025 aa		11.34	□□□□□ -0.59
LYRM1-208	ENST00000567954	FLAD1	Q8NFF5	587 aa		11.34	□□□□□ -0.59
LYRM1-208	ENST00000567954	MAP2K1	Q02750	393 aa	Predicted RBP	11.33	□□□□□ -0.6
LYRM1-208	ENST00000567954	NHS	Q6T4R5	1651 aa		11.33	□□□□□ -0.6
LYRM1-208	ENST00000567954	RNF181	Q9P0P0	153 aa		11.32	□□□□□ -0.6
LYRM1-208	ENST00000567954	IFT172	Q9UG01	1749 aa		11.32	□□□□□ -0.6
LYRM1-208	ENST00000567954	TGFB2	P61812	414 aa		11.31	□□□□□ -0.6
LYRM1-208	ENST00000567954	NLRP13	Q86W25	1043 aa		11.31	□□□□□ -0.6
LYRM1-208	ENST00000567954	MCOLN1	Q9GZU1	580 aa		11.31	□□□□□ -0.6
LYRM1-208	ENST00000567954	POGK	Q9P215	609 aa		11.31	□□□□□ -0.6
LYRM1-208	ENST00000567954	KNDC1	Q76NI1	1749 aa		11.3	□□□□□ -0.6
LYRM1-208	ENST00000567954	ZBTB7C	A1YPR0	619 aa		11.3	□□□□□ -0.6
LYRM1-208	ENST00000567954	FCHSD2	O94868	740 aa		11.3	□□□□□ -0.6
LYRM1-208	ENST00000567954	HABP4	Q5JVS0	413 aa	Known RBP	11.3	□□□□□ -0.6
LYRM1-208	ENST00000567954	CCNL1	Q9UK58	526 aa	Predicted RBP	11.3	□□□□□ -0.6
LYRM1-208	ENST00000567954	AXIN2	Q9Y2T1	843 aa		11.3	□□□□□ -0.6
LYRM1-208	ENST00000567954	WASL	O00401	505 aa	Predicted RBP	11.29	□□□□□ -0.6
LYRM1-208	ENST00000567954		A0A0G2JLW4	131 aa		11.28	□□□□□ -0.6
LYRM1-208	ENST00000567954	GLTPD2	A6NH11	291 aa		11.28	□□□□□ -0.6
LYRM1-208	ENST00000567954	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.28	□□□□□ -0.6
LYRM1-208	ENST00000567954	TRPM1	Q7Z4N2	1603 aa		11.27	□□□□□ -0.6
LYRM1-208	ENST00000567954	PITPNM2	Q9BZ72	1349 aa		11.27	□□□□□ -0.61
LYRM1-208	ENST00000567954	CCDC7	Q96M83	1385 aa		11.27	□□□□□ -0.61
LYRM1-208	ENST00000567954	AKAP12	Q02952	1782 aa		11.26	□□□□□ -0.61
LYRM1-208	ENST00000567954		A0A0C4DFX4	3053 aa		11.26	□□□□□ -0.61
LYRM1-208	ENST00000567954	CSB-PGBD3	P0DP91	1061 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms