RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 TRIM37O94972 964 aa21.34■■□□□ 1.01
SCAMP2-209ENST00000567638 ARHGEF25Q86VW2 580 aa21.34■■□□□ 1.01
SCAMP2-209ENST00000567638 AXIN2Q9Y2T1 843 aa21.33■■□□□ 1.01
SCAMP2-209ENST00000567638 NUP188Q5SRE5 1749 aa21.32■■□□□ 1
SCAMP2-209ENST00000567638 WDR17Q8IZU2 1322 aa21.32■■□□□ 1
SCAMP2-209ENST00000567638 SOX12O15370 315 aa21.32■■□□□ 1
SCAMP2-209ENST00000567638 TOM1L2Q6ZVM7 507 aa21.32■■□□□ 1
SCAMP2-209ENST00000567638 USP31Q70CQ4 1352 aa21.32■■□□□ 1
SCAMP2-209ENST00000567638 TMC1Q8TDI8 760 aa21.31■■□□□ 1
SCAMP2-209ENST00000567638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.3■■□□□ 1
SCAMP2-209ENST00000567638 PUS7Q96PZ0 661 aaKnown RBP21.3■■□□□ 1
SCAMP2-209ENST00000567638 EDC4Q6P2E9 1401 aaKnown RBP21.29■■□□□ 1
SCAMP2-209ENST00000567638 PARD3Q8TEW0 1356 aa21.29■■□□□ 1
SCAMP2-209ENST00000567638 PSDA5PKW4 1024 aaPredicted RBP21.29■■□□□ 1
SCAMP2-209ENST00000567638 EZH2Q15910 746 aaKnown RBP21.29■■□□□ 1
SCAMP2-209ENST00000567638 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
SCAMP2-209ENST00000567638 SLC12A5Q9H2X9 1139 aa21.29■■□□□ 1
SCAMP2-209ENST00000567638 OVOS2A0A0G2JMS6 1433 aa21.29■■□□□ 1
SCAMP2-209ENST00000567638 OVOS2A0A0J9YW53 1432 aa21.29■■□□□ 1
SCAMP2-209ENST00000567638 OVOS2Q6IE36 1432 aa21.29■■□□□ 1
SCAMP2-209ENST00000567638 RGPD3A6NKT7 1758 aaPredicted RBP21.28■■□□□ 1
SCAMP2-209ENST00000567638 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
SCAMP2-209ENST00000567638 A0A1W2PP64 1363 aa21.28■■□□□ 1
SCAMP2-209ENST00000567638 APBA3O96018 575 aa21.28■■□□□ 1
SCAMP2-209ENST00000567638 NME9Q86XW9 330 aa21.28■■□□□ 1
SCAMP2-209ENST00000567638 CAMKK2Q96RR4 588 aa21.28■■□□□ 1
SCAMP2-209ENST00000567638 TESK2Q96S53 571 aa21.27■■□□□ 1
SCAMP2-209ENST00000567638 SRCAPQ6ZRS2 3230 aa21.27■□□□□ 0.99
SCAMP2-209ENST00000567638 C11orf95C9JLR9 678 aaPredicted RBP21.26■□□□□ 0.99
SCAMP2-209ENST00000567638 TERF2IPQ9NYB0 399 aa21.26■□□□□ 0.99
SCAMP2-209ENST00000567638 NINLQ9Y2I6 1382 aa21.25■□□□□ 0.99
SCAMP2-209ENST00000567638 ST20-MTHFSA0A0A6YYL1 179 aa21.25■□□□□ 0.99
SCAMP2-209ENST00000567638 DDB1Q16531 1140 aa21.25■□□□□ 0.99
SCAMP2-209ENST00000567638 CSB-PGBD3P0DP91 1061 aa21.24■□□□□ 0.99
SCAMP2-209ENST00000567638 CDCA7Q9BWT1 371 aaPredicted RBP21.24■□□□□ 0.99
SCAMP2-209ENST00000567638 CARD10Q9BWT7 1032 aa21.24■□□□□ 0.99
SCAMP2-209ENST00000567638 CCDC7Q96M83 1385 aa21.23■□□□□ 0.99
SCAMP2-209ENST00000567638 SLC24A1O60721 1099 aa21.22■□□□□ 0.99
SCAMP2-209ENST00000567638 R3HDM1Q15032 1099 aaKnown RBP21.22■□□□□ 0.99
SCAMP2-209ENST00000567638 FAM208AQ9UK61 1670 aaKnown RBP21.21■□□□□ 0.99
SCAMP2-209ENST00000567638 USP47Q96K76 1375 aa21.2■□□□□ 0.98
SCAMP2-209ENST00000567638 ERBB3P21860 1342 aa21.19■□□□□ 0.98
SCAMP2-209ENST00000567638 BCL9O00512 1426 aa21.19■□□□□ 0.98
SCAMP2-209ENST00000567638 MARCH10Q8NA82 808 aaPredicted RBP21.18■□□□□ 0.98
SCAMP2-209ENST00000567638 TNS2Q63HR2 1409 aa21.18■□□□□ 0.98
SCAMP2-209ENST00000567638 ANKRD36BQ8N2N9 1353 aa21.16■□□□□ 0.98
SCAMP2-209ENST00000567638 KIF20BQ96Q89 1820 aa21.15■□□□□ 0.98
SCAMP2-209ENST00000567638 NHSQ6T4R5 1651 aa21.15■□□□□ 0.98
SCAMP2-209ENST00000567638 TMF1P82094 1093 aa21.14■□□□□ 0.97
SCAMP2-209ENST00000567638 MYOM1P52179 1685 aa21.14■□□□□ 0.97
SCAMP2-209ENST00000567638 EXOC5O00471 708 aa21.13■□□□□ 0.97
SCAMP2-209ENST00000567638 NBPF14Q5TI25 921 aa21.13■□□□□ 0.97
SCAMP2-209ENST00000567638 ANKRD24Q8TF21 1146 aa21.13■□□□□ 0.97
SCAMP2-209ENST00000567638 BCL11BQ9C0K0 894 aaPredicted RBP21.13■□□□□ 0.97
SCAMP2-209ENST00000567638 NLRP2Q9NX02 1062 aa21.13■□□□□ 0.97
SCAMP2-209ENST00000567638 RGPD2P0DJD1 1756 aa21.13■□□□□ 0.97
SCAMP2-209ENST00000567638 PLSCR1O15162 318 aa21.12■□□□□ 0.97
SCAMP2-209ENST00000567638 PTF1AQ7RTS3 328 aa21.11■□□□□ 0.97
SCAMP2-209ENST00000567638 COG3Q96JB2 828 aa21.11■□□□□ 0.97
SCAMP2-209ENST00000567638 TIMELESSQ9UNS1 1208 aa21.1■□□□□ 0.97
SCAMP2-209ENST00000567638 CLSPNQ9HAW4 1339 aa21.09■□□□□ 0.97
SCAMP2-209ENST00000567638 IL2RBP14784 551 aa21.09■□□□□ 0.97
SCAMP2-209ENST00000567638 IP6K1Q92551 441 aa21.09■□□□□ 0.97
SCAMP2-209ENST00000567638 KAT6BQ8WYB5 2073 aa21.08■□□□□ 0.97
SCAMP2-209ENST00000567638 BTAF1O14981 1849 aa21.08■□□□□ 0.96
SCAMP2-209ENST00000567638 MAP3K19Q56UN5 1328 aa21.07■□□□□ 0.96
SCAMP2-209ENST00000567638 CASZ1Q86V15 1759 aa21.07■□□□□ 0.96
SCAMP2-209ENST00000567638 CDCA8Q53HL2 280 aa21.06■□□□□ 0.96
SCAMP2-209ENST00000567638 SHANK3Q9BYB0 1731 aa21.05■□□□□ 0.96
SCAMP2-209ENST00000567638 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
SCAMP2-209ENST00000567638 HOXC9P31274 260 aa21.04■□□□□ 0.96
SCAMP2-209ENST00000567638 RTL1A6NKG5 1358 aa21.04■□□□□ 0.96
SCAMP2-209ENST00000567638 FYB1O15117 783 aa21.03■□□□□ 0.96
SCAMP2-209ENST00000567638 LTV1Q96GA3 475 aaPredicted RBP21.03■□□□□ 0.96
SCAMP2-209ENST00000567638 KCNQ2O43526 872 aa21.02■□□□□ 0.96
SCAMP2-209ENST00000567638 FBLN1P23142 703 aa21.02■□□□□ 0.96
SCAMP2-209ENST00000567638 AMPHP49418 695 aa21.02■□□□□ 0.96
SCAMP2-209ENST00000567638 PROM2Q8N271 834 aa21.02■□□□□ 0.96
SCAMP2-209ENST00000567638 GGNBP2Q9H3C7 697 aa21.02■□□□□ 0.96
SCAMP2-209ENST00000567638 ANO8Q9HCE9 1232 aaPredicted RBP21.02■□□□□ 0.96
SCAMP2-209ENST00000567638 DOT1LQ8TEK3 1739 aa21.01■□□□□ 0.95
SCAMP2-209ENST00000567638 TXNRD1Q16881 649 aa21■□□□□ 0.95
SCAMP2-209ENST00000567638 ACSBG1Q96GR2 724 aa21■□□□□ 0.95
SCAMP2-209ENST00000567638 PAPPAQ13219 1627 aa20.99■□□□□ 0.95
SCAMP2-209ENST00000567638 RRS1Q15050 365 aaKnown RBP20.98■□□□□ 0.95
SCAMP2-209ENST00000567638 ANKRD26Q9UPS8 1709 aa20.98■□□□□ 0.95
SCAMP2-209ENST00000567638 NSD3Q9BZ95 1437 aa20.97■□□□□ 0.95
SCAMP2-209ENST00000567638 SPON1Q9HCB6 807 aa20.97■□□□□ 0.95
SCAMP2-209ENST00000567638 MEGF6O75095 1541 aa20.97■□□□□ 0.95
SCAMP2-209ENST00000567638 SMG6Q86US8 1419 aaKnown RBP20.95■□□□□ 0.95
SCAMP2-209ENST00000567638 CARD14Q9BXL6 1004 aa20.95■□□□□ 0.94
SCAMP2-209ENST00000567638 MAP2P11137 1827 aaKnown RBP20.94■□□□□ 0.94
SCAMP2-209ENST00000567638 DDX54Q8TDD1 881 aaKnown RBP20.94■□□□□ 0.94
SCAMP2-209ENST00000567638 KIF24Q5T7B8 1368 aa20.94■□□□□ 0.94
SCAMP2-209ENST00000567638 STK32BQ9NY57 414 aa20.93■□□□□ 0.94
SCAMP2-209ENST00000567638 INSRP06213 1382 aa20.93■□□□□ 0.94
SCAMP2-209ENST00000567638 FLT4P35916 1363 aa20.93■□□□□ 0.94
SCAMP2-209ENST00000567638 LY75O60449 1722 aa20.92■□□□□ 0.94
SCAMP2-209ENST00000567638 QSER1Q2KHR3 1735 aa20.92■□□□□ 0.94
SCAMP2-209ENST00000567638 SLC15A2Q16348 729 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms