RNA–Protein interactions for RNA: ENST00000565996.1

HIRIP3-205, Transcript of HIRA interacting protein 3, humanhuman

TSL 2

Gene HIRIP3, Length 582 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRIP3-205ENST00000565996 ABCC6O95255 1503 aa12.88□□□□□ -0.35
HIRIP3-205ENST00000565996 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
HIRIP3-205ENST00000565996 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
HIRIP3-205ENST00000565996 LTN1O94822 1766 aa12.87□□□□□ -0.35
HIRIP3-205ENST00000565996 A0A0G2JS52 829 aa12.87□□□□□ -0.35
HIRIP3-205ENST00000565996 MYT1Q01538 1121 aa12.87□□□□□ -0.35
HIRIP3-205ENST00000565996 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
HIRIP3-205ENST00000565996 COL18A1P39060 1754 aa12.86□□□□□ -0.35
HIRIP3-205ENST00000565996 CSB-PGBD3P0DP91 1061 aa12.86□□□□□ -0.35
HIRIP3-205ENST00000565996 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
HIRIP3-205ENST00000565996 USP35Q9P2H5 1018 aa12.86□□□□□ -0.35
HIRIP3-205ENST00000565996 FAM98CQ17RN3 349 aaKnown RBP12.85□□□□□ -0.35
HIRIP3-205ENST00000565996 AXIN2Q9Y2T1 843 aa12.85□□□□□ -0.35
HIRIP3-205ENST00000565996 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
HIRIP3-205ENST00000565996 SPATA31A1Q5TZJ5 1347 aa12.85□□□□□ -0.35
HIRIP3-205ENST00000565996 AMPHP49418 695 aa12.84□□□□□ -0.35
HIRIP3-205ENST00000565996 TOM1L2Q6ZVM7 507 aa12.84□□□□□ -0.35
HIRIP3-205ENST00000565996 CRB1P82279 1406 aa12.84□□□□□ -0.35
HIRIP3-205ENST00000565996 MAP3K19Q56UN5 1328 aa12.84□□□□□ -0.35
HIRIP3-205ENST00000565996 WDR17Q8IZU2 1322 aa12.84□□□□□ -0.35
HIRIP3-205ENST00000565996 RGPD5Q99666 1765 aa12.84□□□□□ -0.35
HIRIP3-205ENST00000565996 NSD2O96028 1365 aa12.83□□□□□ -0.36
HIRIP3-205ENST00000565996 FBLN1P23142 703 aa12.83□□□□□ -0.36
HIRIP3-205ENST00000565996 SEPT12Q8IYM1 358 aa12.83□□□□□ -0.36
HIRIP3-205ENST00000565996 ANKRD26Q9UPS8 1709 aa12.82□□□□□ -0.36
HIRIP3-205ENST00000565996 BLMP54132 1417 aaPredicted RBP12.82□□□□□ -0.36
HIRIP3-205ENST00000565996 ONECUT3O60422 494 aaPredicted RBP12.82□□□□□ -0.36
HIRIP3-205ENST00000565996 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
HIRIP3-205ENST00000565996 TCP11L2Q8N4U5 519 aa12.82□□□□□ -0.36
HIRIP3-205ENST00000565996 IP6K1Q92551 441 aa12.82□□□□□ -0.36
HIRIP3-205ENST00000565996 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
HIRIP3-205ENST00000565996 TNNT2P45379 298 aaPredicted RBP12.81□□□□□ -0.36
HIRIP3-205ENST00000565996 ANKRD24Q8TF21 1146 aa12.81□□□□□ -0.36
HIRIP3-205ENST00000565996 THRAP3Q9Y2W1 955 aaKnown RBP12.81□□□□□ -0.36
HIRIP3-205ENST00000565996 ERBB3P21860 1342 aa12.81□□□□□ -0.36
HIRIP3-205ENST00000565996 HOXC9P31274 260 aa12.8□□□□□ -0.36
HIRIP3-205ENST00000565996 BARGINQ6ZT62 677 aa12.8□□□□□ -0.36
HIRIP3-205ENST00000565996 MORC1Q86VD1 984 aa12.8□□□□□ -0.36
HIRIP3-205ENST00000565996 LTV1Q96GA3 475 aaPredicted RBP12.8□□□□□ -0.36
HIRIP3-205ENST00000565996 NLRP2Q9NX02 1062 aa12.8□□□□□ -0.36
HIRIP3-205ENST00000565996 THSD7AQ9UPZ6 1657 aa12.8□□□□□ -0.36
HIRIP3-205ENST00000565996 PPM1GO15355 546 aaPredicted RBP12.79□□□□□ -0.36
HIRIP3-205ENST00000565996 CARD10Q9BWT7 1032 aa12.79□□□□□ -0.36
HIRIP3-205ENST00000565996 FLT4P35916 1363 aa12.79□□□□□ -0.36
HIRIP3-205ENST00000565996 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
HIRIP3-205ENST00000565996 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
HIRIP3-205ENST00000565996 AMER1Q5JTC6 1135 aaPredicted RBP12.78□□□□□ -0.36
HIRIP3-205ENST00000565996 KRT27Q7Z3Y8 459 aa12.78□□□□□ -0.36
HIRIP3-205ENST00000565996 KIF24Q5T7B8 1368 aa12.78□□□□□ -0.36
HIRIP3-205ENST00000565996 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.36
HIRIP3-205ENST00000565996 EMILIN1Q9Y6C2 1016 aa12.77□□□□□ -0.37
HIRIP3-205ENST00000565996 PEAK1Q9H792 1746 aa12.76□□□□□ -0.37
HIRIP3-205ENST00000565996 PER1O15534 1290 aaPredicted RBP12.76□□□□□ -0.37
HIRIP3-205ENST00000565996 CNGB1Q14028 1251 aaPredicted RBP12.76□□□□□ -0.37
HIRIP3-205ENST00000565996 CC2D1BQ5T0F9 858 aaKnown RBP12.76□□□□□ -0.37
HIRIP3-205ENST00000565996 CDCA7Q9BWT1 371 aaPredicted RBP12.76□□□□□ -0.37
HIRIP3-205ENST00000565996 INSRP06213 1382 aa12.76□□□□□ -0.37
HIRIP3-205ENST00000565996 MAP2P11137 1827 aaKnown RBP12.75□□□□□ -0.37
HIRIP3-205ENST00000565996 PDE3BQ13370 1112 aa12.75□□□□□ -0.37
HIRIP3-205ENST00000565996 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
HIRIP3-205ENST00000565996 WNK3Q9BYP7 1800 aa12.75□□□□□ -0.37
HIRIP3-205ENST00000565996 POLKQ9UBT6 870 aa12.75□□□□□ -0.37
HIRIP3-205ENST00000565996 PARP4Q9UKK3 1724 aaKnown RBP12.74□□□□□ -0.37
HIRIP3-205ENST00000565996 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.37
HIRIP3-205ENST00000565996 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
HIRIP3-205ENST00000565996 DDB1Q16531 1140 aa12.73□□□□□ -0.37
HIRIP3-205ENST00000565996 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
HIRIP3-205ENST00000565996 DISP2A7MBM2 1401 aa12.72□□□□□ -0.37
HIRIP3-205ENST00000565996 IL2RBP14784 551 aa12.72□□□□□ -0.37
HIRIP3-205ENST00000565996 FAM182BQ5T319 152 aa12.72□□□□□ -0.37
HIRIP3-205ENST00000565996 EXOC5O00471 708 aa12.71□□□□□ -0.37
HIRIP3-205ENST00000565996 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
HIRIP3-205ENST00000565996 NBPF6Q5VWK0 638 aa12.7□□□□□ -0.38
HIRIP3-205ENST00000565996 FAM196AQ6ZSG2 479 aa12.7□□□□□ -0.38
HIRIP3-205ENST00000565996 CCDC125Q86Z20 511 aa12.7□□□□□ -0.38
HIRIP3-205ENST00000565996 USHBP1Q8N6Y0 703 aa12.7□□□□□ -0.38
HIRIP3-205ENST00000565996 NBPF4Q96M43 638 aa12.7□□□□□ -0.38
HIRIP3-205ENST00000565996 TNS2Q63HR2 1409 aa12.7□□□□□ -0.38
HIRIP3-205ENST00000565996 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
HIRIP3-205ENST00000565996 RAPGEF4Q8WZA2 1011 aa12.69□□□□□ -0.38
HIRIP3-205ENST00000565996 MTHFSP49914 203 aa12.68□□□□□ -0.38
HIRIP3-205ENST00000565996 DDX10Q13206 875 aaKnown RBP12.68□□□□□ -0.38
HIRIP3-205ENST00000565996 EIF4A2Q14240 407 aaKnown RBP12.68□□□□□ -0.38
HIRIP3-205ENST00000565996 OVOS2A0A0G2JMS6 1433 aa12.68□□□□□ -0.38
HIRIP3-205ENST00000565996 TATP17735 454 aaPredicted RBP12.66□□□□□ -0.38
HIRIP3-205ENST00000565996 MARCH10Q8NA82 808 aaPredicted RBP12.66□□□□□ -0.38
HIRIP3-205ENST00000565996 EYA1Q99502 592 aa12.66□□□□□ -0.38
HIRIP3-205ENST00000565996 MEGF6O75095 1541 aa12.66□□□□□ -0.38
HIRIP3-205ENST00000565996 RGPD1P0DJD0 1748 aa12.65□□□□□ -0.38
HIRIP3-205ENST00000565996 TRIM37O94972 964 aa12.65□□□□□ -0.38
HIRIP3-205ENST00000565996 DDX54Q8TDD1 881 aaKnown RBP12.65□□□□□ -0.38
HIRIP3-205ENST00000565996 EP400Q96L91 3159 aa12.65□□□□□ -0.39
HIRIP3-205ENST00000565996 NCAPD2Q15021 1401 aa12.64□□□□□ -0.39
HIRIP3-205ENST00000565996 ZCRB1Q8TBF4 217 aaKnown RBP12.64□□□□□ -0.39
HIRIP3-205ENST00000565996 IGSF1Q8N6C5 1336 aa12.63□□□□□ -0.39
HIRIP3-205ENST00000565996 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
HIRIP3-205ENST00000565996 BAG6P46379 1132 aa12.63□□□□□ -0.39
HIRIP3-205ENST00000565996 CFAP53Q96M91 514 aa12.63□□□□□ -0.39
HIRIP3-205ENST00000565996 DIAPH1O60610 1272 aaKnown RBP12.62□□□□□ -0.39
HIRIP3-205ENST00000565996 PPP2R1AP30153 589 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms