RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RAPGEF3O95398 923 aa25.24■■□□□ 1.63
MAP1LC3B-206ENST00000564844 PRDM10Q9NQV6 1147 aa25.24■■□□□ 1.63
MAP1LC3B-206ENST00000564844 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.23■■□□□ 1.63
MAP1LC3B-206ENST00000564844 CABP1Q9NZU7 370 aa25.23■■□□□ 1.63
MAP1LC3B-206ENST00000564844 ZFYVE16Q7Z3T8 1539 aa25.23■■□□□ 1.63
MAP1LC3B-206ENST00000564844 TWISTNBQ3B726 338 aaPredicted RBP25.23■■□□□ 1.63
MAP1LC3B-206ENST00000564844 MBIPQ9NS73 344 aa25.23■■□□□ 1.63
MAP1LC3B-206ENST00000564844 ALDH1L2Q3SY69 923 aa25.22■■□□□ 1.63
MAP1LC3B-206ENST00000564844 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.22■■□□□ 1.63
MAP1LC3B-206ENST00000564844 TSC1Q92574 1164 aa25.22■■□□□ 1.63
MAP1LC3B-206ENST00000564844 PRAM1Q96QH2 718 aa25.22■■□□□ 1.63
MAP1LC3B-206ENST00000564844 TMEM63CQ9P1W3 806 aa25.22■■□□□ 1.63
MAP1LC3B-206ENST00000564844 PTMSP20962 102 aa25.21■■□□□ 1.63
MAP1LC3B-206ENST00000564844 GDPD2Q9HCC8 539 aa25.21■■□□□ 1.63
MAP1LC3B-206ENST00000564844 FANCAO15360 1455 aa25.21■■□□□ 1.63
MAP1LC3B-206ENST00000564844 DTNBO60941 627 aa25.21■■□□□ 1.63
MAP1LC3B-206ENST00000564844 PTMAP06454 111 aaKnown RBP25.21■■□□□ 1.63
MAP1LC3B-206ENST00000564844 RABEP1Q15276 862 aa25.21■■□□□ 1.63
MAP1LC3B-206ENST00000564844 USP26Q9BXU7 913 aa25.21■■□□□ 1.63
MAP1LC3B-206ENST00000564844 MYOM2P54296 1465 aa25.2■■□□□ 1.63
MAP1LC3B-206ENST00000564844 EMILIN1Q9Y6C2 1016 aa25.2■■□□□ 1.62
MAP1LC3B-206ENST00000564844 NUCB2P80303 420 aa25.19■■□□□ 1.62
MAP1LC3B-206ENST00000564844 ZDHHC9Q9Y397 364 aa25.19■■□□□ 1.62
MAP1LC3B-206ENST00000564844 MROH2AA6NES4 1674 aa25.19■■□□□ 1.62
MAP1LC3B-206ENST00000564844 SDSP20132 328 aa25.19■■□□□ 1.62
MAP1LC3B-206ENST00000564844 ZNF830Q96NB3 372 aaPredicted RBP25.19■■□□□ 1.62
MAP1LC3B-206ENST00000564844 STAG3Q9UJ98 1225 aa25.19■■□□□ 1.62
MAP1LC3B-206ENST00000564844 TET3O43151 1660 aa25.19■■□□□ 1.62
MAP1LC3B-206ENST00000564844 ZRANB1Q9UGI0 708 aa25.18■■□□□ 1.62
MAP1LC3B-206ENST00000564844 FAM177BA6PVY3 158 aa25.18■■□□□ 1.62
MAP1LC3B-206ENST00000564844 TERF2IPQ9NYB0 399 aa25.18■■□□□ 1.62
MAP1LC3B-206ENST00000564844 ADGRL1O94910 1474 aa25.17■■□□□ 1.62
MAP1LC3B-206ENST00000564844 DNTTIP2Q5QJE6 756 aaKnown RBP25.17■■□□□ 1.62
MAP1LC3B-206ENST00000564844 IL16Q14005 1332 aa25.17■■□□□ 1.62
MAP1LC3B-206ENST00000564844 NUTM2FA1L443 756 aa25.17■■□□□ 1.62
MAP1LC3B-206ENST00000564844 ZNF445P59923 1031 aa25.17■■□□□ 1.62
MAP1LC3B-206ENST00000564844 QRICH2Q9H0J4 1663 aa25.17■■□□□ 1.62
MAP1LC3B-206ENST00000564844 TTC22Q5TAA0 569 aa25.16■■□□□ 1.62
MAP1LC3B-206ENST00000564844 KIF1BO60333 1816 aa25.15■■□□□ 1.62
MAP1LC3B-206ENST00000564844 NEK4P51957 841 aa25.15■■□□□ 1.62
MAP1LC3B-206ENST00000564844 NOL7Q9UMY1 257 aaKnown RBP25.15■■□□□ 1.62
MAP1LC3B-206ENST00000564844 ATP7AQ04656 1500 aa25.15■■□□□ 1.62
MAP1LC3B-206ENST00000564844 FCHSD2O94868 740 aa25.14■■□□□ 1.61
MAP1LC3B-206ENST00000564844 ST18O60284 1047 aa25.13■■□□□ 1.61
MAP1LC3B-206ENST00000564844 POLKQ9UBT6 870 aa25.13■■□□□ 1.61
MAP1LC3B-206ENST00000564844 KIAA1210Q9ULL0 1709 aa25.13■■□□□ 1.61
MAP1LC3B-206ENST00000564844 INTS3Q68E01 1043 aaKnown RBP25.13■■□□□ 1.61
MAP1LC3B-206ENST00000564844 VGFO15240 615 aaPredicted RBP25.12■■□□□ 1.61
MAP1LC3B-206ENST00000564844 PLCB2Q00722 1185 aa25.12■■□□□ 1.61
MAP1LC3B-206ENST00000564844 C17orf53Q8N3J3 647 aaPredicted RBP25.12■■□□□ 1.61
MAP1LC3B-206ENST00000564844 RRS1Q15050 365 aaKnown RBP25.12■■□□□ 1.61
MAP1LC3B-206ENST00000564844 NFE2L2Q16236 605 aa25.12■■□□□ 1.61
MAP1LC3B-206ENST00000564844 HDGFL2Q7Z4V5 671 aaPredicted RBP25.11■■□□□ 1.61
MAP1LC3B-206ENST00000564844 TULP4Q9NRJ4 1543 aa25.11■■□□□ 1.61
MAP1LC3B-206ENST00000564844 SLC4A10Q6U841 1118 aa25.11■■□□□ 1.61
MAP1LC3B-206ENST00000564844 SHROOM2Q13796 1616 aa25.11■■□□□ 1.61
MAP1LC3B-206ENST00000564844 IDI1Q13907 227 aa25.11■■□□□ 1.61
MAP1LC3B-206ENST00000564844 WAPLQ7Z5K2 1190 aa25.11■■□□□ 1.61
MAP1LC3B-206ENST00000564844 CDK19Q9BWU1 502 aa25.11■■□□□ 1.61
MAP1LC3B-206ENST00000564844 ZKSCAN5Q9Y2L8 839 aa25.11■■□□□ 1.61
MAP1LC3B-206ENST00000564844 CYP2E1P05181 493 aaPredicted RBP25.09■■□□□ 1.61
MAP1LC3B-206ENST00000564844 GNAI1P63096 354 aa25.09■■□□□ 1.61
MAP1LC3B-206ENST00000564844 ADGRB2O60241 1585 aa25.09■■□□□ 1.61
MAP1LC3B-206ENST00000564844 DCTPP1Q9H773 170 aa25.09■■□□□ 1.61
MAP1LC3B-206ENST00000564844 MIS18AQ9NYP9 233 aa25.09■■□□□ 1.61
MAP1LC3B-206ENST00000564844 MEIS3Q99687 375 aa25.09■■□□□ 1.61
MAP1LC3B-206ENST00000564844 LARP6Q9BRS8 491 aaKnown RBP25.09■■□□□ 1.61
MAP1LC3B-206ENST00000564844 NCKAP5LQ9HCH0 1330 aa25.08■■□□□ 1.61
MAP1LC3B-206ENST00000564844 NPATQ14207 1427 aa25.08■■□□□ 1.61
MAP1LC3B-206ENST00000564844 NSD2O96028 1365 aa25.08■■□□□ 1.61
MAP1LC3B-206ENST00000564844 CLEC17AQ6ZS10 378 aa25.08■■□□□ 1.6
MAP1LC3B-206ENST00000564844 ZCCHC11Q5TAX3 1644 aaKnown RBP25.08■■□□□ 1.6
MAP1LC3B-206ENST00000564844 CFAP74Q9C0B2 1584 aa25.07■■□□□ 1.6
MAP1LC3B-206ENST00000564844 NPM1P06748 294 aaKnown RBP eCLIP25.07■■□□□ 1.6
MAP1LC3B-206ENST00000564844 LRSAM1Q6UWE0 723 aa25.07■■□□□ 1.6
MAP1LC3B-206ENST00000564844 UPF3BQ9BZI7 483 aaKnown RBP25.07■■□□□ 1.6
MAP1LC3B-206ENST00000564844 MLECQ14165 292 aa25.06■■□□□ 1.6
MAP1LC3B-206ENST00000564844 ADGRB1O14514 1584 aa25.06■■□□□ 1.6
MAP1LC3B-206ENST00000564844 ABCC4O15439 1325 aa25.06■■□□□ 1.6
MAP1LC3B-206ENST00000564844 CASC1Q6TDU7 716 aa25.06■■□□□ 1.6
MAP1LC3B-206ENST00000564844 PDLIM2Q96JY6 352 aa25.06■■□□□ 1.6
MAP1LC3B-206ENST00000564844 CHMP4BQ9H444 224 aaKnown RBP25.06■■□□□ 1.6
MAP1LC3B-206ENST00000564844 ZHX1Q9UKY1 873 aaPredicted RBP25.05■■□□□ 1.6
MAP1LC3B-206ENST00000564844 GADD45BO75293 160 aaPredicted RBP25.05■■□□□ 1.6
MAP1LC3B-206ENST00000564844 FBXO31Q5XUX0 539 aaPredicted RBP25.05■■□□□ 1.6
MAP1LC3B-206ENST00000564844 TMX3Q96JJ7 454 aa25.05■■□□□ 1.6
MAP1LC3B-206ENST00000564844 API5Q9BZZ5 524 aaKnown RBP25.05■■□□□ 1.6
MAP1LC3B-206ENST00000564844 NCBP3Q53F19 620 aaKnown RBP25.04■■□□□ 1.6
MAP1LC3B-206ENST00000564844 F6X3S4 739 aa25.04■■□□□ 1.6
MAP1LC3B-206ENST00000564844 EXOC6BQ9Y2D4 811 aa25.04■■□□□ 1.6
MAP1LC3B-206ENST00000564844 NME9Q86XW9 330 aa25.04■■□□□ 1.6
MAP1LC3B-206ENST00000564844 NRXN1Q9ULB1 1477 aa25.04■■□□□ 1.6
MAP1LC3B-206ENST00000564844 ZNF500O60304 480 aaPredicted RBP25.03■■□□□ 1.6
MAP1LC3B-206ENST00000564844 RILPL2Q969X0 211 aa25.03■■□□□ 1.6
MAP1LC3B-206ENST00000564844 MCM10Q7L590 875 aa25.03■■□□□ 1.6
MAP1LC3B-206ENST00000564844 ARHGAP45Q92619 1136 aa25.03■■□□□ 1.6
MAP1LC3B-206ENST00000564844 PALD1Q9ULE6 856 aa25.03■■□□□ 1.6
MAP1LC3B-206ENST00000564844 OSCARQ8IYS5 282 aa25.02■■□□□ 1.6
MAP1LC3B-206ENST00000564844 PPRC1Q5VV67 1664 aaKnown RBP25.02■■□□□ 1.6
MAP1LC3B-206ENST00000564844 COL3A1P02461 1466 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms