RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 AATKQ6ZMQ8 1374 aa25.2■■□□□ 1.63
PKD1-227ENST00000564313 LMO7Q8WWI1 1683 aa25.2■■□□□ 1.63
PKD1-227ENST00000564313 EN1Q05925 392 aaPredicted RBP25.2■■□□□ 1.62
PKD1-227ENST00000564313 R3HDM1Q15032 1099 aaKnown RBP25.19■■□□□ 1.62
PKD1-227ENST00000564313 CARD14Q9BXL6 1004 aa25.19■■□□□ 1.62
PKD1-227ENST00000564313 CGNL1Q0VF96 1302 aa25.18■■□□□ 1.62
PKD1-227ENST00000564313 FYB1O15117 783 aa25.18■■□□□ 1.62
PKD1-227ENST00000564313 ARHGEF25Q86VW2 580 aa25.18■■□□□ 1.62
PKD1-227ENST00000564313 A0A0G2JS52 829 aa25.17■■□□□ 1.62
PKD1-227ENST00000564313 MYT1Q01538 1121 aa25.17■■□□□ 1.62
PKD1-227ENST00000564313 CCDC7Q96M83 1385 aa25.17■■□□□ 1.62
PKD1-227ENST00000564313 PANK3Q9H999 370 aa25.16■■□□□ 1.62
PKD1-227ENST00000564313 SOX12O15370 315 aa25.15■■□□□ 1.62
PKD1-227ENST00000564313 CAMTA1Q9Y6Y1 1673 aa25.15■■□□□ 1.62
PKD1-227ENST00000564313 COL18A1P39060 1754 aa25.14■■□□□ 1.62
PKD1-227ENST00000564313 FAM98CQ17RN3 349 aaKnown RBP25.14■■□□□ 1.62
PKD1-227ENST00000564313 LTN1O94822 1766 aa25.13■■□□□ 1.61
PKD1-227ENST00000564313 ZBTB7CA1YPR0 619 aa25.13■■□□□ 1.61
PKD1-227ENST00000564313 EVA1CP58658 441 aa25.13■■□□□ 1.61
PKD1-227ENST00000564313 GGNBP2Q9H3C7 697 aa25.13■■□□□ 1.61
PKD1-227ENST00000564313 STRN4Q9NRL3 753 aa25.13■■□□□ 1.61
PKD1-227ENST00000564313 COL5A2P05997 1499 aaPredicted RBP25.12■■□□□ 1.61
PKD1-227ENST00000564313 RGPD1P0DJD0 1748 aa25.12■■□□□ 1.61
PKD1-227ENST00000564313 SPATA31A5Q5VU36 1347 aa25.12■■□□□ 1.61
PKD1-227ENST00000564313 WASHC2AQ641Q2 1341 aa25.12■■□□□ 1.61
PKD1-227ENST00000564313 SPATA31A7Q8IWB4 1347 aa25.12■■□□□ 1.61
PKD1-227ENST00000564313 NSD2O96028 1365 aa25.11■■□□□ 1.61
PKD1-227ENST00000564313 FAM182BQ5T319 152 aa25.11■■□□□ 1.61
PKD1-227ENST00000564313 ANKRD26Q9UPS8 1709 aa25.09■■□□□ 1.61
PKD1-227ENST00000564313 YY1P25490 414 aa25.09■■□□□ 1.61
PKD1-227ENST00000564313 KNSTRNQ9Y448 316 aa25.09■■□□□ 1.61
PKD1-227ENST00000564313 DISP2A7MBM2 1401 aa25.07■■□□□ 1.6
PKD1-227ENST00000564313 SPATA31A1Q5TZJ5 1347 aa25.07■■□□□ 1.6
PKD1-227ENST00000564313 EZH2Q15910 746 aaKnown RBP25.06■■□□□ 1.6
PKD1-227ENST00000564313 LARP1Q6PKG0 1096 aaKnown RBP25.06■■□□□ 1.6
PKD1-227ENST00000564313 RTL1A6NKG5 1358 aa25.05■■□□□ 1.6
PKD1-227ENST00000564313 CRB1P82279 1406 aa25.05■■□□□ 1.6
PKD1-227ENST00000564313 TNS1Q9HBL0 1735 aaKnown RBP25.05■■□□□ 1.6
PKD1-227ENST00000564313 RGPD5Q99666 1765 aa25.04■■□□□ 1.6
PKD1-227ENST00000564313 AXIN2Q9Y2T1 843 aa25.04■■□□□ 1.6
PKD1-227ENST00000564313 WDR17Q8IZU2 1322 aa25.04■■□□□ 1.6
PKD1-227ENST00000564313 KIF24Q5T7B8 1368 aa25.04■■□□□ 1.6
PKD1-227ENST00000564313 THRAP3Q9Y2W1 955 aaKnown RBP25.03■■□□□ 1.6
PKD1-227ENST00000564313 IP6K1Q92551 441 aa25.02■■□□□ 1.6
PKD1-227ENST00000564313 USP35Q9P2H5 1018 aa25.02■■□□□ 1.6
PKD1-227ENST00000564313 MAP3K19Q56UN5 1328 aa25.02■■□□□ 1.6
PKD1-227ENST00000564313 AMPHP49418 695 aa25.01■■□□□ 1.59
PKD1-227ENST00000564313 CSB-PGBD3P0DP91 1061 aa25■■□□□ 1.59
PKD1-227ENST00000564313 BARGINQ6ZT62 677 aa25■■□□□ 1.59
PKD1-227ENST00000564313 TOM1L2Q6ZVM7 507 aa25■■□□□ 1.59
PKD1-227ENST00000564313 TCP11L2Q8N4U5 519 aa25■■□□□ 1.59
PKD1-227ENST00000564313 CAMKK2Q96RR4 588 aa25■■□□□ 1.59
PKD1-227ENST00000564313 ERBB3P21860 1342 aa25■■□□□ 1.59
PKD1-227ENST00000564313 FAM208AQ9UK61 1670 aaKnown RBP24.98■■□□□ 1.59
PKD1-227ENST00000564313 PER1O15534 1290 aaPredicted RBP24.98■■□□□ 1.59
PKD1-227ENST00000564313 HOXC9P31274 260 aa24.98■■□□□ 1.59
PKD1-227ENST00000564313 THSD7AQ9UPZ6 1657 aa24.97■■□□□ 1.59
PKD1-227ENST00000564313 RRS1Q15050 365 aaKnown RBP24.97■■□□□ 1.59
PKD1-227ENST00000564313 FLT4P35916 1363 aa24.96■■□□□ 1.59
PKD1-227ENST00000564313 NPC1L1Q9UHC9 1359 aa24.96■■□□□ 1.59
PKD1-227ENST00000564313 AMER1Q5JTC6 1135 aaPredicted RBP24.96■■□□□ 1.59
PKD1-227ENST00000564313 TRIM37O94972 964 aa24.95■■□□□ 1.58
PKD1-227ENST00000564313 ANKRD24Q8TF21 1146 aa24.95■■□□□ 1.58
PKD1-227ENST00000564313 CARD10Q9BWT7 1032 aa24.95■■□□□ 1.58
PKD1-227ENST00000564313 FBLN1P23142 703 aa24.94■■□□□ 1.58
PKD1-227ENST00000564313 MORC1Q86VD1 984 aa24.94■■□□□ 1.58
PKD1-227ENST00000564313 SMG6Q86US8 1419 aaKnown RBP24.94■■□□□ 1.58
PKD1-227ENST00000564313 MAP2P11137 1827 aaKnown RBP24.93■■□□□ 1.58
PKD1-227ENST00000564313 CDCA7Q9BWT1 371 aaPredicted RBP24.93■■□□□ 1.58
PKD1-227ENST00000564313 INSRP06213 1382 aa24.92■■□□□ 1.58
PKD1-227ENST00000564313 WNK3Q9BYP7 1800 aa24.91■■□□□ 1.58
PKD1-227ENST00000564313 APBA3O96018 575 aa24.91■■□□□ 1.58
PKD1-227ENST00000564313 PEAK1Q9H792 1746 aa24.91■■□□□ 1.58
PKD1-227ENST00000564313 PARP4Q9UKK3 1724 aaKnown RBP24.9■■□□□ 1.58
PKD1-227ENST00000564313 NLRP2Q9NX02 1062 aa24.9■■□□□ 1.58
PKD1-227ENST00000564313 EMILIN1Q9Y6C2 1016 aa24.9■■□□□ 1.58
PKD1-227ENST00000564313 FAM196AQ6ZSG2 479 aa24.89■■□□□ 1.58
PKD1-227ENST00000564313 PARD3Q8TEW0 1356 aa24.89■■□□□ 1.57
PKD1-227ENST00000564313 TNNT2P45379 298 aaPredicted RBP24.88■■□□□ 1.57
PKD1-227ENST00000564313 POLKQ9UBT6 870 aa24.88■■□□□ 1.57
PKD1-227ENST00000564313 RREB1Q92766 1687 aa24.87■■□□□ 1.57
PKD1-227ENST00000564313 PPM1GO15355 546 aaPredicted RBP24.86■■□□□ 1.57
PKD1-227ENST00000564313 LTV1Q96GA3 475 aaPredicted RBP24.86■■□□□ 1.57
PKD1-227ENST00000564313 HSP90AB2PQ58FF8 381 aa24.85■■□□□ 1.57
PKD1-227ENST00000564313 CC2D1BQ5T0F9 858 aaKnown RBP24.85■■□□□ 1.57
PKD1-227ENST00000564313 NUP188Q5SRE5 1749 aa24.85■■□□□ 1.57
PKD1-227ENST00000564313 PPP1R1BQ9UD71 204 aaPredicted RBP24.84■■□□□ 1.57
PKD1-227ENST00000564313 PDE3BQ13370 1112 aa24.83■■□□□ 1.57
PKD1-227ENST00000564313 NBPF14Q5TI25 921 aa24.83■■□□□ 1.57
PKD1-227ENST00000564313 LRRC37A3O60309 1634 aa24.83■■□□□ 1.56
PKD1-227ENST00000564313 DCAF8L1A6NGE4 600 aa24.81■■□□□ 1.56
PKD1-227ENST00000564313 DDB1Q16531 1140 aa24.81■■□□□ 1.56
PKD1-227ENST00000564313 SPON1Q9HCB6 807 aa24.81■■□□□ 1.56
PKD1-227ENST00000564313 IL2RBP14784 551 aa24.8■■□□□ 1.56
PKD1-227ENST00000564313 KCNQ2O43526 872 aa24.79■■□□□ 1.56
PKD1-227ENST00000564313 RGPD2P0DJD1 1756 aa24.79■■□□□ 1.56
PKD1-227ENST00000564313 TNS2Q63HR2 1409 aa24.77■■□□□ 1.56
PKD1-227ENST00000564313 EXOC5O00471 708 aa24.76■■□□□ 1.55
PKD1-227ENST00000564313 NBPF6Q5VWK0 638 aa24.76■■□□□ 1.55
PKD1-227ENST00000564313 NBPF4Q96M43 638 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms