RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 FAM208AQ9UK61 1670 aaKnown RBP20.74■□□□□ 0.91
SNX29-203ENST00000564111 CCER1Q8TC90 406 aaPredicted RBP20.73■□□□□ 0.91
SNX29-203ENST00000564111 ARHGEF25Q86VW2 580 aa20.73■□□□□ 0.91
SNX29-203ENST00000564111 CDCA7Q9BWT1 371 aaPredicted RBP20.73■□□□□ 0.91
SNX29-203ENST00000564111 OVOS2A0A0J9YW53 1432 aa20.72■□□□□ 0.91
SNX29-203ENST00000564111 OVOS2Q6IE36 1432 aa20.72■□□□□ 0.91
SNX29-203ENST00000564111 KIF20BQ96Q89 1820 aa20.71■□□□□ 0.91
SNX29-203ENST00000564111 RGPD5Q99666 1765 aa20.71■□□□□ 0.91
SNX29-203ENST00000564111 SLC12A5Q9H2X9 1139 aa20.71■□□□□ 0.91
SNX29-203ENST00000564111 WDR17Q8IZU2 1322 aa20.71■□□□□ 0.91
SNX29-203ENST00000564111 LARP1Q6PKG0 1096 aaKnown RBP20.7■□□□□ 0.9
SNX29-203ENST00000564111 TNS1Q9HBL0 1735 aaKnown RBP20.7■□□□□ 0.9
SNX29-203ENST00000564111 ZBTB7CA1YPR0 619 aa20.69■□□□□ 0.9
SNX29-203ENST00000564111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.69■□□□□ 0.9
SNX29-203ENST00000564111 CCDC7Q96M83 1385 aa20.69■□□□□ 0.9
SNX29-203ENST00000564111 BAG6P46379 1132 aa20.69■□□□□ 0.9
SNX29-203ENST00000564111 FAM196AQ6ZSG2 479 aa20.69■□□□□ 0.9
SNX29-203ENST00000564111 DISP2A7MBM2 1401 aa20.68■□□□□ 0.9
SNX29-203ENST00000564111 LRRC37A3O60309 1634 aa20.68■□□□□ 0.9
SNX29-203ENST00000564111 MYOM1P52179 1685 aa20.68■□□□□ 0.9
SNX29-203ENST00000564111 PDE3BQ13370 1112 aa20.68■□□□□ 0.9
SNX29-203ENST00000564111 NME9Q86XW9 330 aa20.66■□□□□ 0.9
SNX29-203ENST00000564111 TOM1L2Q6ZVM7 507 aa20.66■□□□□ 0.9
SNX29-203ENST00000564111 ZRANB1Q9UGI0 708 aa20.66■□□□□ 0.9
SNX29-203ENST00000564111 PARD3Q8TEW0 1356 aa20.65■□□□□ 0.9
SNX29-203ENST00000564111 COG3Q96JB2 828 aa20.65■□□□□ 0.9
SNX29-203ENST00000564111 CARD10Q9BWT7 1032 aa20.65■□□□□ 0.9
SNX29-203ENST00000564111 CSB-PGBD3P0DP91 1061 aa20.63■□□□□ 0.89
SNX29-203ENST00000564111 USP35Q9P2H5 1018 aa20.63■□□□□ 0.89
SNX29-203ENST00000564111 RGPD3A6NKT7 1758 aaPredicted RBP20.63■□□□□ 0.89
SNX29-203ENST00000564111 RGPD4Q7Z3J3 1758 aa20.63■□□□□ 0.89
SNX29-203ENST00000564111 RTL1A6NKG5 1358 aa20.63■□□□□ 0.89
SNX29-203ENST00000564111 OVOS2A0A0G2JMS6 1433 aa20.63■□□□□ 0.89
SNX29-203ENST00000564111 PEAK1Q9H792 1746 aa20.62■□□□□ 0.89
SNX29-203ENST00000564111 EIF4G2P78344 907 aaKnown RBP eCLIP20.61■□□□□ 0.89
SNX29-203ENST00000564111 SOX12O15370 315 aa20.6■□□□□ 0.89
SNX29-203ENST00000564111 BCL9O00512 1426 aa20.6■□□□□ 0.89
SNX29-203ENST00000564111 DDB1Q16531 1140 aa20.58■□□□□ 0.89
SNX29-203ENST00000564111 AXIN2Q9Y2T1 843 aa20.58■□□□□ 0.89
SNX29-203ENST00000564111 LRP5O75197 1615 aa20.58■□□□□ 0.89
SNX29-203ENST00000564111 KIF24Q5T7B8 1368 aa20.58■□□□□ 0.88
SNX29-203ENST00000564111 ERBB3P21860 1342 aa20.58■□□□□ 0.88
SNX29-203ENST00000564111 SBF2Q86WG5 1849 aa20.57■□□□□ 0.88
SNX29-203ENST00000564111 RREB1Q92766 1687 aa20.57■□□□□ 0.88
SNX29-203ENST00000564111 TNS2Q63HR2 1409 aa20.57■□□□□ 0.88
SNX29-203ENST00000564111 ANKRD26Q9UPS8 1709 aa20.57■□□□□ 0.88
SNX29-203ENST00000564111 IP6K1Q92551 441 aa20.56■□□□□ 0.88
SNX29-203ENST00000564111 SMG6Q86US8 1419 aaKnown RBP20.54■□□□□ 0.88
SNX29-203ENST00000564111 ANKRD24Q8TF21 1146 aa20.54■□□□□ 0.88
SNX29-203ENST00000564111 DEFB132Q7Z7B7 95 aa20.53■□□□□ 0.88
SNX29-203ENST00000564111 NSD3Q9BZ95 1437 aa20.52■□□□□ 0.88
SNX29-203ENST00000564111 AMPHP49418 695 aa20.51■□□□□ 0.87
SNX29-203ENST00000564111 NLRP2Q9NX02 1062 aa20.51■□□□□ 0.87
SNX29-203ENST00000564111 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
SNX29-203ENST00000564111 EXOC5O00471 708 aa20.5■□□□□ 0.87
SNX29-203ENST00000564111 FYB1O15117 783 aa20.5■□□□□ 0.87
SNX29-203ENST00000564111 TRIM37O94972 964 aa20.5■□□□□ 0.87
SNX29-203ENST00000564111 NHSQ6T4R5 1651 aa20.5■□□□□ 0.87
SNX29-203ENST00000564111 NUP188Q5SRE5 1749 aa20.5■□□□□ 0.87
SNX29-203ENST00000564111 IL2RBP14784 551 aa20.49■□□□□ 0.87
SNX29-203ENST00000564111 MAP3K19Q56UN5 1328 aa20.49■□□□□ 0.87
SNX29-203ENST00000564111 HSPA5P11021 654 aaKnown RBP20.49■□□□□ 0.87
SNX29-203ENST00000564111 APBA3O96018 575 aa20.48■□□□□ 0.87
SNX29-203ENST00000564111 FAM182BQ5T319 152 aa20.48■□□□□ 0.87
SNX29-203ENST00000564111 NSD2O96028 1365 aa20.48■□□□□ 0.87
SNX29-203ENST00000564111 HOXC9P31274 260 aa20.47■□□□□ 0.87
SNX29-203ENST00000564111 FLT4P35916 1363 aa20.47■□□□□ 0.87
SNX29-203ENST00000564111 EN1Q05925 392 aaPredicted RBP20.46■□□□□ 0.87
SNX29-203ENST00000564111 EP400Q96L91 3159 aa20.46■□□□□ 0.87
SNX29-203ENST00000564111 CAMKK2Q96RR4 588 aa20.45■□□□□ 0.86
SNX29-203ENST00000564111 BCL11BQ9C0K0 894 aaPredicted RBP20.45■□□□□ 0.86
SNX29-203ENST00000564111 GGNBP2Q9H3C7 697 aa20.45■□□□□ 0.86
SNX29-203ENST00000564111 INSRP06213 1382 aa20.45■□□□□ 0.86
SNX29-203ENST00000564111 NBPF14Q5TI25 921 aa20.42■□□□□ 0.86
SNX29-203ENST00000564111 MARCH10Q8NA82 808 aaPredicted RBP20.42■□□□□ 0.86
SNX29-203ENST00000564111 RGPD2P0DJD1 1756 aa20.42■□□□□ 0.86
SNX29-203ENST00000564111 PLSCR1O15162 318 aa20.42■□□□□ 0.86
SNX29-203ENST00000564111 CARD14Q9BXL6 1004 aa20.42■□□□□ 0.86
SNX29-203ENST00000564111 EZH2Q15910 746 aaKnown RBP20.41■□□□□ 0.86
SNX29-203ENST00000564111 MAP2P11137 1827 aaKnown RBP20.4■□□□□ 0.86
SNX29-203ENST00000564111 PLEKHG2Q9H7P9 1386 aa20.39■□□□□ 0.86
SNX29-203ENST00000564111 POLR3GLQ9BT43 218 aa20.39■□□□□ 0.85
SNX29-203ENST00000564111 LTV1Q96GA3 475 aaPredicted RBP20.38■□□□□ 0.85
SNX29-203ENST00000564111 SHANK3Q9BYB0 1731 aa20.38■□□□□ 0.85
SNX29-203ENST00000564111 RRS1Q15050 365 aaKnown RBP20.37■□□□□ 0.85
SNX29-203ENST00000564111 BTAF1O14981 1849 aa20.36■□□□□ 0.85
SNX29-203ENST00000564111 PKD1L3Q7Z443 1732 aa20.35■□□□□ 0.85
SNX29-203ENST00000564111 NCAPD2Q15021 1401 aa20.34■□□□□ 0.85
SNX29-203ENST00000564111 RAPGEF4Q8WZA2 1011 aa20.34■□□□□ 0.85
SNX29-203ENST00000564111 DOT1LQ8TEK3 1739 aa20.33■□□□□ 0.85
SNX29-203ENST00000564111 TATP17735 454 aaPredicted RBP20.33■□□□□ 0.84
SNX29-203ENST00000564111 HMGB2P26583 209 aaKnown RBP20.33■□□□□ 0.84
SNX29-203ENST00000564111 PANK3Q9H999 370 aa20.33■□□□□ 0.84
SNX29-203ENST00000564111 WASHC2AQ641Q2 1341 aa20.33■□□□□ 0.84
SNX29-203ENST00000564111 MEGF6O75095 1541 aa20.32■□□□□ 0.84
SNX29-203ENST00000564111 ZCRB1Q8TBF4 217 aaKnown RBP20.32■□□□□ 0.84
SNX29-203ENST00000564111 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
SNX29-203ENST00000564111 R3HDM1Q15032 1099 aaKnown RBP20.3■□□□□ 0.84
SNX29-203ENST00000564111 PCDH11XQ9BZA7 1347 aa20.29■□□□□ 0.84
SNX29-203ENST00000564111 PCDH11YQ9BZA8 1340 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms