RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 NWD2Q9ULI1 1742 aa25.92■■□□□ 1.74
SPSB3-204ENST00000563741 FAM83GA6ND36 823 aa25.92■■□□□ 1.74
SPSB3-204ENST00000563741 UNC5CLQ8IV45 518 aa25.92■■□□□ 1.74
SPSB3-204ENST00000563741 POLKQ9UBT6 870 aa25.91■■□□□ 1.74
SPSB3-204ENST00000563741 CDK12Q9NYV4 1490 aaPredicted RBP25.91■■□□□ 1.74
SPSB3-204ENST00000563741 COL14A1Q05707 1796 aaKnown RBP25.9■■□□□ 1.74
SPSB3-204ENST00000563741 COL3A1P02461 1466 aaPredicted RBP25.9■■□□□ 1.74
SPSB3-204ENST00000563741 USP19O94966 1318 aa25.89■■□□□ 1.73
SPSB3-204ENST00000563741 EMILIN1Q9Y6C2 1016 aa25.88■■□□□ 1.73
SPSB3-204ENST00000563741 CFAP53Q96M91 514 aa25.88■■□□□ 1.73
SPSB3-204ENST00000563741 RRS1Q15050 365 aaKnown RBP25.87■■□□□ 1.73
SPSB3-204ENST00000563741 PRDM11Q9NQV5 511 aa25.87■■□□□ 1.73
SPSB3-204ENST00000563741 MAP2P11137 1827 aaKnown RBP25.86■■□□□ 1.73
SPSB3-204ENST00000563741 INSRP06213 1382 aa25.85■■□□□ 1.73
SPSB3-204ENST00000563741 SOX12O15370 315 aa25.85■■□□□ 1.73
SPSB3-204ENST00000563741 KIAA0232Q92628 1395 aa25.85■■□□□ 1.73
SPSB3-204ENST00000563741 WDR43Q15061 677 aaKnown RBP eCLIP25.84■■□□□ 1.73
SPSB3-204ENST00000563741 GJD4Q96KN9 370 aaPredicted RBP25.84■■□□□ 1.73
SPSB3-204ENST00000563741 PPM1GO15355 546 aaPredicted RBP25.83■■□□□ 1.73
SPSB3-204ENST00000563741 ZC3H6P61129 1189 aaKnown RBP25.83■■□□□ 1.73
SPSB3-204ENST00000563741 BTG4Q9NY30 223 aa25.83■■□□□ 1.73
SPSB3-204ENST00000563741 GCP02774 474 aa25.83■■□□□ 1.72
SPSB3-204ENST00000563741 SLIT3O75094 1523 aa25.82■■□□□ 1.72
SPSB3-204ENST00000563741 NFAT5O94916 1531 aa25.82■■□□□ 1.72
SPSB3-204ENST00000563741 NRAPQ86VF7 1730 aa25.82■■□□□ 1.72
SPSB3-204ENST00000563741 VPS72Q15906 364 aa25.82■■□□□ 1.72
SPSB3-204ENST00000563741 ADAMTS8Q9UP79 889 aa25.82■■□□□ 1.72
SPSB3-204ENST00000563741 MAP3K19Q56UN5 1328 aa25.81■■□□□ 1.72
SPSB3-204ENST00000563741 RGS12O14924 1447 aa25.81■■□□□ 1.72
SPSB3-204ENST00000563741 BLMP54132 1417 aaPredicted RBP25.81■■□□□ 1.72
SPSB3-204ENST00000563741 CPDO75976 1380 aa25.8■■□□□ 1.72
SPSB3-204ENST00000563741 PEAK1Q9H792 1746 aa25.8■■□□□ 1.72
SPSB3-204ENST00000563741 CHRNA2Q15822 529 aa25.8■■□□□ 1.72
SPSB3-204ENST00000563741 HNRNPUQ00839 825 aaKnown RBP eCLIP25.79■■□□□ 1.72
SPSB3-204ENST00000563741 CCDC9Q9Y3X0 531 aaKnown RBP25.77■■□□□ 1.72
SPSB3-204ENST00000563741 KCNH5Q8NCM2 988 aa25.77■■□□□ 1.72
SPSB3-204ENST00000563741 GLI3P10071 1580 aa25.76■■□□□ 1.72
SPSB3-204ENST00000563741 DIAPH1O60610 1272 aaKnown RBP25.76■■□□□ 1.71
SPSB3-204ENST00000563741 FLT4P35916 1363 aa25.76■■□□□ 1.71
SPSB3-204ENST00000563741 KIF24Q5T7B8 1368 aa25.74■■□□□ 1.71
SPSB3-204ENST00000563741 LMO7Q8WWI1 1683 aa25.72■■□□□ 1.71
SPSB3-204ENST00000563741 RTL1A6NKG5 1358 aa25.72■■□□□ 1.71
SPSB3-204ENST00000563741 NUDCQ9Y266 331 aa25.72■■□□□ 1.71
SPSB3-204ENST00000563741 IL13P35225 146 aa25.71■■□□□ 1.71
SPSB3-204ENST00000563741 HSP90AB2PQ58FF8 381 aa25.71■■□□□ 1.71
SPSB3-204ENST00000563741 CAMTA1Q9Y6Y1 1673 aa25.71■■□□□ 1.71
SPSB3-204ENST00000563741 ZBTB7CA1YPR0 619 aa25.7■■□□□ 1.7
SPSB3-204ENST00000563741 U2AF1L5P0DN76 240 aaPredicted RBP25.7■■□□□ 1.7
SPSB3-204ENST00000563741 AMPHP49418 695 aa25.7■■□□□ 1.7
SPSB3-204ENST00000563741 EVA1CP58658 441 aa25.7■■□□□ 1.7
SPSB3-204ENST00000563741 U2AF1Q01081 240 aaKnown RBP eCLIP25.7■■□□□ 1.7
SPSB3-204ENST00000563741 LTN1O94822 1766 aa25.7■■□□□ 1.7
SPSB3-204ENST00000563741 U2SURPO15042 1029 aaKnown RBP25.69■■□□□ 1.7
SPSB3-204ENST00000563741 STRN4Q9NRL3 753 aa25.69■■□□□ 1.7
SPSB3-204ENST00000563741 SPATA31A5Q5VU36 1347 aa25.69■■□□□ 1.7
SPSB3-204ENST00000563741 SPATA31A7Q8IWB4 1347 aa25.69■■□□□ 1.7
SPSB3-204ENST00000563741 HOXC9P31274 260 aa25.68■■□□□ 1.7
SPSB3-204ENST00000563741 ONECUT3O60422 494 aaPredicted RBP25.68■■□□□ 1.7
SPSB3-204ENST00000563741 EIF4A2Q14240 407 aaKnown RBP25.68■■□□□ 1.7
SPSB3-204ENST00000563741 ARHGEF25Q86VW2 580 aa25.68■■□□□ 1.7
SPSB3-204ENST00000563741 ZBED9Q6R2W3 1325 aa25.67■■□□□ 1.7
SPSB3-204ENST00000563741 CCDC146Q8IYE0 955 aa25.66■■□□□ 1.7
SPSB3-204ENST00000563741 COL18A1P39060 1754 aa25.66■■□□□ 1.7
SPSB3-204ENST00000563741 SENP3-EIF4A1A0A087X0R7 540 aa25.66■■□□□ 1.7
SPSB3-204ENST00000563741 CENPBP07199 599 aaPredicted RBP25.65■■□□□ 1.7
SPSB3-204ENST00000563741 SEPT12Q8IYM1 358 aa25.64■■□□□ 1.7
SPSB3-204ENST00000563741 SPATA31A1Q5TZJ5 1347 aa25.63■■□□□ 1.69
SPSB3-204ENST00000563741 BRWD3Q6RI45 1802 aa25.63■■□□□ 1.69
SPSB3-204ENST00000563741 IP6K1Q92551 441 aa25.63■■□□□ 1.69
SPSB3-204ENST00000563741 COL5A2P05997 1499 aaPredicted RBP25.63■■□□□ 1.69
SPSB3-204ENST00000563741 FAM98CQ17RN3 349 aaKnown RBP25.63■■□□□ 1.69
SPSB3-204ENST00000563741 LARP1Q6PKG0 1096 aaKnown RBP25.62■■□□□ 1.69
SPSB3-204ENST00000563741 RGPD1P0DJD0 1748 aa25.62■■□□□ 1.69
SPSB3-204ENST00000563741 UPF1Q92900 1129 aaKnown RBP eCLIP25.61■■□□□ 1.69
SPSB3-204ENST00000563741 RGPD5Q99666 1765 aa25.61■■□□□ 1.69
SPSB3-204ENST00000563741 A0A0G2JS52 829 aa25.6■■□□□ 1.69
SPSB3-204ENST00000563741 MYT1Q01538 1121 aa25.6■■□□□ 1.69
SPSB3-204ENST00000563741 RUNDC1Q96C34 613 aa25.6■■□□□ 1.69
SPSB3-204ENST00000563741 ABCC6O95255 1503 aa25.59■■□□□ 1.69
SPSB3-204ENST00000563741 AXIN2Q9Y2T1 843 aa25.59■■□□□ 1.69
SPSB3-204ENST00000563741 PLEKHF1Q96S99 279 aa25.58■■□□□ 1.69
SPSB3-204ENST00000563741 RSPH6AQ9H0K4 717 aa25.58■■□□□ 1.69
SPSB3-204ENST00000563741 APAF1O14727 1248 aa25.57■■□□□ 1.68
SPSB3-204ENST00000563741 FCHSD2O94868 740 aa25.57■■□□□ 1.68
SPSB3-204ENST00000563741 USP35Q9P2H5 1018 aa25.57■■□□□ 1.68
SPSB3-204ENST00000563741 HMOX1P09601 288 aa25.57■■□□□ 1.68
SPSB3-204ENST00000563741 CRB1P82279 1406 aa25.56■■□□□ 1.68
SPSB3-204ENST00000563741 THSD7AQ9UPZ6 1657 aa25.56■■□□□ 1.68
SPSB3-204ENST00000563741 IGSF1Q8N6C5 1336 aa25.55■■□□□ 1.68
SPSB3-204ENST00000563741 TCP11L2Q8N4U5 519 aa25.55■■□□□ 1.68
SPSB3-204ENST00000563741 BARGINQ6ZT62 677 aa25.54■■□□□ 1.68
SPSB3-204ENST00000563741 SALL2Q9Y467 1007 aaPredicted RBP25.54■■□□□ 1.68
SPSB3-204ENST00000563741 PRKAR2BP31323 418 aa25.54■■□□□ 1.68
SPSB3-204ENST00000563741 KRT27Q7Z3Y8 459 aa25.54■■□□□ 1.68
SPSB3-204ENST00000563741 AEBP1Q8IUX7 1158 aa25.54■■□□□ 1.68
SPSB3-204ENST00000563741 LTV1Q96GA3 475 aaPredicted RBP25.54■■□□□ 1.68
SPSB3-204ENST00000563741 EYA1Q99502 592 aa25.54■■□□□ 1.68
SPSB3-204ENST00000563741 THRAP3Q9Y2W1 955 aaKnown RBP25.54■■□□□ 1.68
SPSB3-204ENST00000563741 WDR17Q8IZU2 1322 aa25.53■■□□□ 1.68
SPSB3-204ENST00000563741 KDRP35968 1356 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms