RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 PIK3R4Q99570 1358 aa25.05■■□□□ 1.6
CDH5-204ENST00000563425 FMN2Q9NZ56 1722 aa25.05■■□□□ 1.6
CDH5-204ENST00000563425 SSH1Q8WYL5 1049 aa25.05■■□□□ 1.6
CDH5-204ENST00000563425 RGPD1P0DJD0 1748 aa25.04■■□□□ 1.6
CDH5-204ENST00000563425 VIRMAQ69YN4 1812 aaKnown RBP25.03■■□□□ 1.6
CDH5-204ENST00000563425 CALD1Q05682 793 aaKnown RBP25.03■■□□□ 1.6
CDH5-204ENST00000563425 CHD2O14647 1828 aaKnown RBP25.03■■□□□ 1.6
CDH5-204ENST00000563425 TTC21AQ8NDW8 1320 aa25.03■■□□□ 1.6
CDH5-204ENST00000563425 MVPQ14764 893 aaKnown RBP25.02■■□□□ 1.6
CDH5-204ENST00000563425 DZIP1LQ8IYY4 767 aaKnown RBP25.02■■□□□ 1.6
CDH5-204ENST00000563425 NOP58Q9Y2X3 529 aaKnown RBP25.02■■□□□ 1.6
CDH5-204ENST00000563425 PMFBP1Q8TBY8 1022 aa25.01■■□□□ 1.59
CDH5-204ENST00000563425 ANKARQ7Z5J8 1434 aa25■■□□□ 1.59
CDH5-204ENST00000563425 ADAMTSL3P82987 1691 aa25■■□□□ 1.59
CDH5-204ENST00000563425 PCDHB15Q9Y5E8 787 aa25■■□□□ 1.59
CDH5-204ENST00000563425 PIK3C2AO00443 1686 aa24.99■■□□□ 1.59
CDH5-204ENST00000563425 LMOD3Q0VAK6 560 aa24.99■■□□□ 1.59
CDH5-204ENST00000563425 EIF4A2Q14240 407 aaKnown RBP24.99■■□□□ 1.59
CDH5-204ENST00000563425 ALDH1L2Q3SY69 923 aa24.99■■□□□ 1.59
CDH5-204ENST00000563425 FTSJ3Q8IY81 847 aaKnown RBP24.99■■□□□ 1.59
CDH5-204ENST00000563425 TRIM27P14373 513 aa24.98■■□□□ 1.59
CDH5-204ENST00000563425 ZNF428Q96B54 188 aa24.98■■□□□ 1.59
CDH5-204ENST00000563425 SETD1BQ9UPS6 1966 aaKnown RBP24.98■■□□□ 1.59
CDH5-204ENST00000563425 KCNA6P17658 529 aa24.98■■□□□ 1.59
CDH5-204ENST00000563425 RGS3P49796 1198 aa24.98■■□□□ 1.59
CDH5-204ENST00000563425 FAM161AQ3B820 660 aa24.98■■□□□ 1.59
CDH5-204ENST00000563425 ATF7IPQ6VMQ6 1270 aa24.98■■□□□ 1.59
CDH5-204ENST00000563425 IFT57Q9NWB7 429 aa24.98■■□□□ 1.59
CDH5-204ENST00000563425 GNAI1P63096 354 aa24.97■■□□□ 1.59
CDH5-204ENST00000563425 KIF16BQ96L93 1317 aa24.96■■□□□ 1.59
CDH5-204ENST00000563425 ZNF853P0CG23 659 aa24.96■■□□□ 1.59
CDH5-204ENST00000563425 THUMPD2Q9BTF0 503 aaKnown RBP24.96■■□□□ 1.59
CDH5-204ENST00000563425 NPM2Q86SE8 214 aaKnown RBP24.96■■□□□ 1.59
CDH5-204ENST00000563425 NGDNQ8NEJ9 315 aaKnown RBP24.96■■□□□ 1.59
CDH5-204ENST00000563425 LAS1LQ9Y4W2 734 aaKnown RBP24.96■■□□□ 1.59
CDH5-204ENST00000563425 USP54Q70EL1 1684 aa24.95■■□□□ 1.58
CDH5-204ENST00000563425 NOB1Q9ULX3 412 aaKnown RBP24.95■■□□□ 1.58
CDH5-204ENST00000563425 MARF1Q9Y4F3 1742 aaKnown RBP24.95■■□□□ 1.58
CDH5-204ENST00000563425 BRPF1P55201 1214 aaPredicted RBP24.94■■□□□ 1.58
CDH5-204ENST00000563425 C8orf34Q49A92 452 aa24.94■■□□□ 1.58
CDH5-204ENST00000563425 PAK3O75914 559 aaPredicted RBP24.94■■□□□ 1.58
CDH5-204ENST00000563425 IPO8O15397 1037 aaKnown RBP24.93■■□□□ 1.58
CDH5-204ENST00000563425 HSP90AB2PQ58FF8 381 aa24.92■■□□□ 1.58
CDH5-204ENST00000563425 SULT6B1Q6IMI4 303 aa24.92■■□□□ 1.58
CDH5-204ENST00000563425 AEBP1Q8IUX7 1158 aa24.92■■□□□ 1.58
CDH5-204ENST00000563425 RWDD1Q9H446 243 aaPredicted RBP24.92■■□□□ 1.58
CDH5-204ENST00000563425 ZBTB47Q9UFB7 747 aaPredicted RBP24.92■■□□□ 1.58
CDH5-204ENST00000563425 DDX19BQ9UMR2 479 aa24.92■■□□□ 1.58
CDH5-204ENST00000563425 ANKLE2Q86XL3 938 aa24.91■■□□□ 1.58
CDH5-204ENST00000563425 CFAP44Q96MT7 982 aa24.91■■□□□ 1.58
CDH5-204ENST00000563425 MBIPQ9NS73 344 aa24.9■■□□□ 1.58
CDH5-204ENST00000563425 VAMP4O75379 141 aa24.9■■□□□ 1.58
CDH5-204ENST00000563425 MAP3K19Q56UN5 1328 aa24.89■■□□□ 1.58
CDH5-204ENST00000563425 SBNO1A3KN83 1393 aa24.89■■□□□ 1.58
CDH5-204ENST00000563425 ITPRIPQ8IWB1 547 aa24.88■■□□□ 1.57
CDH5-204ENST00000563425 ARHGEF10O15013 1369 aa24.87■■□□□ 1.57
CDH5-204ENST00000563425 FLT4P35916 1363 aa24.87■■□□□ 1.57
CDH5-204ENST00000563425 FAM83GA6ND36 823 aa24.87■■□□□ 1.57
CDH5-204ENST00000563425 TMEM57Q8N5G2 664 aa24.87■■□□□ 1.57
CDH5-204ENST00000563425 TSPYL6Q8N831 410 aa24.86■■□□□ 1.57
CDH5-204ENST00000563425 SOX12O15370 315 aa24.85■■□□□ 1.57
CDH5-204ENST00000563425 MRPL50Q8N5N7 158 aaKnown RBP24.84■■□□□ 1.57
CDH5-204ENST00000563425 ARHGAP45Q92619 1136 aa24.83■■□□□ 1.57
CDH5-204ENST00000563425 HDAC1Q13547 482 aaPredicted RBP24.82■■□□□ 1.56
CDH5-204ENST00000563425 DCTN1Q14203 1278 aa24.82■■□□□ 1.56
CDH5-204ENST00000563425 PDZRN3Q9UPQ7 1066 aa24.82■■□□□ 1.56
CDH5-204ENST00000563425 TWISTNBQ3B726 338 aaPredicted RBP24.82■■□□□ 1.56
CDH5-204ENST00000563425 ZBTB40Q9NUA8 1239 aa24.82■■□□□ 1.56
CDH5-204ENST00000563425 KDRP35968 1356 aa24.81■■□□□ 1.56
CDH5-204ENST00000563425 C8orf58Q8NAV2 365 aa24.8■■□□□ 1.56
CDH5-204ENST00000563425 KIF24Q5T7B8 1368 aa24.8■■□□□ 1.56
CDH5-204ENST00000563425 AMPHP49418 695 aa24.8■■□□□ 1.56
CDH5-204ENST00000563425 NLRP6P59044 892 aa24.8■■□□□ 1.56
CDH5-204ENST00000563425 DDRGK1Q96HY6 314 aa24.8■■□□□ 1.56
CDH5-204ENST00000563425 ELL2O00472 640 aaPredicted RBP24.78■■□□□ 1.56
CDH5-204ENST00000563425 IGSF1Q8N6C5 1336 aa24.77■■□□□ 1.56
CDH5-204ENST00000563425 LTN1O94822 1766 aa24.77■■□□□ 1.56
CDH5-204ENST00000563425 ADGRL3Q9HAR2 1447 aa24.77■■□□□ 1.56
CDH5-204ENST00000563425 CHL1O00533 1208 aa24.76■■□□□ 1.55
CDH5-204ENST00000563425 PHF8Q9UPP1 1060 aa24.76■■□□□ 1.55
CDH5-204ENST00000563425 NPHP4O75161 1426 aaPredicted RBP24.75■■□□□ 1.55
CDH5-204ENST00000563425 MCM10Q7L590 875 aa24.74■■□□□ 1.55
CDH5-204ENST00000563425 CRB1P82279 1406 aa24.74■■□□□ 1.55
CDH5-204ENST00000563425 ABCC4O15439 1325 aa24.74■■□□□ 1.55
CDH5-204ENST00000563425 ABTB2Q8N961 1025 aa24.74■■□□□ 1.55
CDH5-204ENST00000563425 EYA1Q99502 592 aa24.74■■□□□ 1.55
CDH5-204ENST00000563425 KIAA0232Q92628 1395 aa24.73■■□□□ 1.55
CDH5-204ENST00000563425 NWD1Q149M9 1564 aa24.73■■□□□ 1.55
CDH5-204ENST00000563425 NUTM2GQ5VZR2 741 aa24.73■■□□□ 1.55
CDH5-204ENST00000563425 SMC5Q8IY18 1101 aa24.73■■□□□ 1.55
CDH5-204ENST00000563425 CHMP4BQ9H444 224 aaKnown RBP24.73■■□□□ 1.55
CDH5-204ENST00000563425 HOXC9P31274 260 aa24.72■■□□□ 1.55
CDH5-204ENST00000563425 ZBTB7BO15156 539 aaPredicted RBP24.71■■□□□ 1.55
CDH5-204ENST00000563425 HAP1P54257 671 aaPredicted RBP24.71■■□□□ 1.55
CDH5-204ENST00000563425 MTHFSDQ2M296 383 aaKnown RBP24.71■■□□□ 1.55
CDH5-204ENST00000563425 API5Q9BZZ5 524 aaKnown RBP24.7■■□□□ 1.54
CDH5-204ENST00000563425 LRRC37A3O60309 1634 aa24.7■■□□□ 1.54
CDH5-204ENST00000563425 RTL1A6NKG5 1358 aa24.69■■□□□ 1.54
CDH5-204ENST00000563425 RBM33Q96EV2 1170 aaKnown RBP24.69■■□□□ 1.54
CDH5-204ENST00000563425 NFAT5O94916 1531 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms