RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 EIF4G2P78344 907 aaKnown RBP eCLIP26.52■■□□□ 1.84
TRADD-203ENST00000563348 COL18A1P39060 1754 aa26.51■■□□□ 1.83
TRADD-203ENST00000563348 CRB1P82279 1406 aa26.5■■□□□ 1.83
TRADD-203ENST00000563348 WDR17Q8IZU2 1322 aa26.49■■□□□ 1.83
TRADD-203ENST00000563348 TOM1L2Q6ZVM7 507 aa26.49■■□□□ 1.83
TRADD-203ENST00000563348 THSD7AQ9UPZ6 1657 aa26.49■■□□□ 1.83
TRADD-203ENST00000563348 OVOS2A0A0J9YW53 1432 aa26.48■■□□□ 1.83
TRADD-203ENST00000563348 BLMP54132 1417 aaPredicted RBP26.48■■□□□ 1.83
TRADD-203ENST00000563348 OVOS2Q6IE36 1432 aa26.48■■□□□ 1.83
TRADD-203ENST00000563348 HSPA5P11021 654 aaKnown RBP26.48■■□□□ 1.83
TRADD-203ENST00000563348 USP54Q70EL1 1684 aa26.47■■□□□ 1.83
TRADD-203ENST00000563348 COG3Q96JB2 828 aa26.47■■□□□ 1.83
TRADD-203ENST00000563348 FAM182BQ5T319 152 aa26.46■■□□□ 1.83
TRADD-203ENST00000563348 FYB1O15117 783 aa26.45■■□□□ 1.82
TRADD-203ENST00000563348 CSB-PGBD3P0DP91 1061 aa26.45■■□□□ 1.82
TRADD-203ENST00000563348 PDE3BQ13370 1112 aa26.45■■□□□ 1.82
TRADD-203ENST00000563348 SF3B2Q13435 895 aaKnown RBP26.44■■□□□ 1.82
TRADD-203ENST00000563348 CARD10Q9BWT7 1032 aa26.44■■□□□ 1.82
TRADD-203ENST00000563348 FAM196AQ6ZSG2 479 aa26.42■■□□□ 1.82
TRADD-203ENST00000563348 CARD14Q9BXL6 1004 aa26.42■■□□□ 1.82
TRADD-203ENST00000563348 ABCC6O95255 1503 aa26.41■■□□□ 1.82
TRADD-203ENST00000563348 DEFB132Q7Z7B7 95 aa26.4■■□□□ 1.82
TRADD-203ENST00000563348 GGNBP2Q9H3C7 697 aa26.4■■□□□ 1.82
TRADD-203ENST00000563348 IP6K1Q92551 441 aa26.39■■□□□ 1.82
TRADD-203ENST00000563348 CDCA7Q9BWT1 371 aaPredicted RBP26.39■■□□□ 1.82
TRADD-203ENST00000563348 ERBB3P21860 1342 aa26.38■■□□□ 1.81
TRADD-203ENST00000563348 FBLN1P23142 703 aa26.37■■□□□ 1.81
TRADD-203ENST00000563348 POLR3GLQ9BT43 218 aa26.37■■□□□ 1.81
TRADD-203ENST00000563348 RGPD5Q99666 1765 aa26.36■■□□□ 1.81
TRADD-203ENST00000563348 ANKRD24Q8TF21 1146 aa26.36■■□□□ 1.81
TRADD-203ENST00000563348 MAP3K19Q56UN5 1328 aa26.36■■□□□ 1.81
TRADD-203ENST00000563348 DDB1Q16531 1140 aa26.35■■□□□ 1.81
TRADD-203ENST00000563348 CCDC7Q96M83 1385 aa26.34■■□□□ 1.81
TRADD-203ENST00000563348 NLRP2Q9NX02 1062 aa26.34■■□□□ 1.81
TRADD-203ENST00000563348 BAG6P46379 1132 aa26.33■■□□□ 1.81
TRADD-203ENST00000563348 NSD3Q9BZ95 1437 aa26.32■■□□□ 1.8
TRADD-203ENST00000563348 C11orf95C9JLR9 678 aaPredicted RBP26.32■■□□□ 1.8
TRADD-203ENST00000563348 TRIM37O94972 964 aa26.32■■□□□ 1.8
TRADD-203ENST00000563348 AMPHP49418 695 aa26.32■■□□□ 1.8
TRADD-203ENST00000563348 MYOM1P52179 1685 aa26.31■■□□□ 1.8
TRADD-203ENST00000563348 PARP4Q9UKK3 1724 aaKnown RBP26.31■■□□□ 1.8
TRADD-203ENST00000563348 LTN1O94822 1766 aa26.3■■□□□ 1.8
TRADD-203ENST00000563348 HOXC9P31274 260 aa26.3■■□□□ 1.8
TRADD-203ENST00000563348 DISP2A7MBM2 1401 aa26.3■■□□□ 1.8
TRADD-203ENST00000563348 EXOC5O00471 708 aa26.29■■□□□ 1.8
TRADD-203ENST00000563348 RRS1Q15050 365 aaKnown RBP26.29■■□□□ 1.8
TRADD-203ENST00000563348 LTV1Q96GA3 475 aaPredicted RBP26.28■■□□□ 1.8
TRADD-203ENST00000563348 EN1Q05925 392 aaPredicted RBP26.27■■□□□ 1.8
TRADD-203ENST00000563348 CGNL1Q0VF96 1302 aa26.27■■□□□ 1.8
TRADD-203ENST00000563348 MARCH10Q8NA82 808 aaPredicted RBP26.26■■□□□ 1.79
TRADD-203ENST00000563348 PANK3Q9H999 370 aa26.25■■□□□ 1.79
TRADD-203ENST00000563348 APBA3O96018 575 aa26.24■■□□□ 1.79
TRADD-203ENST00000563348 IL2RBP14784 551 aa26.24■■□□□ 1.79
TRADD-203ENST00000563348 OVOS2A0A0G2JMS6 1433 aa26.23■■□□□ 1.79
TRADD-203ENST00000563348 RTL1A6NKG5 1358 aa26.23■■□□□ 1.79
TRADD-203ENST00000563348 RGPD1P0DJD0 1748 aa26.22■■□□□ 1.79
TRADD-203ENST00000563348 LRRC37A3O60309 1634 aa26.21■■□□□ 1.79
TRADD-203ENST00000563348 CAMKK2Q96RR4 588 aa26.21■■□□□ 1.79
TRADD-203ENST00000563348 KIF20BQ96Q89 1820 aa26.2■■□□□ 1.78
TRADD-203ENST00000563348 KIF24Q5T7B8 1368 aa26.2■■□□□ 1.78
TRADD-203ENST00000563348 EZH2Q15910 746 aaKnown RBP26.19■■□□□ 1.78
TRADD-203ENST00000563348 HSP90AB2PQ58FF8 381 aa26.19■■□□□ 1.78
TRADD-203ENST00000563348 BCL9O00512 1426 aa26.19■■□□□ 1.78
TRADD-203ENST00000563348 WNK3Q9BYP7 1800 aa26.18■■□□□ 1.78
TRADD-203ENST00000563348 INSRP06213 1382 aa26.17■■□□□ 1.78
TRADD-203ENST00000563348 PEAK1Q9H792 1746 aa26.17■■□□□ 1.78
TRADD-203ENST00000563348 KIF7Q2M1P5 1343 aa26.16■■□□□ 1.78
TRADD-203ENST00000563348 TNS2Q63HR2 1409 aa26.16■■□□□ 1.78
TRADD-203ENST00000563348 BCL11BQ9C0K0 894 aaPredicted RBP26.16■■□□□ 1.78
TRADD-203ENST00000563348 EMILIN1Q9Y6C2 1016 aa26.16■■□□□ 1.78
TRADD-203ENST00000563348 FLT4P35916 1363 aa26.16■■□□□ 1.78
TRADD-203ENST00000563348 TNS1Q9HBL0 1735 aaKnown RBP26.16■■□□□ 1.78
TRADD-203ENST00000563348 NBPF6Q5VWK0 638 aa26.15■■□□□ 1.78
TRADD-203ENST00000563348 NBPF4Q96M43 638 aa26.15■■□□□ 1.78
TRADD-203ENST00000563348 PARD3Q8TEW0 1356 aa26.14■■□□□ 1.78
TRADD-203ENST00000563348 PTF1AQ7RTS3 328 aa26.12■■□□□ 1.77
TRADD-203ENST00000563348 POLKQ9UBT6 870 aa26.12■■□□□ 1.77
TRADD-203ENST00000563348 PPM1GO15355 546 aaPredicted RBP26.11■■□□□ 1.77
TRADD-203ENST00000563348 KNSTRNQ9Y448 316 aa26.11■■□□□ 1.77
TRADD-203ENST00000563348 FAM208AQ9UK61 1670 aaKnown RBP26.11■■□□□ 1.77
TRADD-203ENST00000563348 SMG6Q86US8 1419 aaKnown RBP26.11■■□□□ 1.77
TRADD-203ENST00000563348 WASHC2AQ641Q2 1341 aa26.11■■□□□ 1.77
TRADD-203ENST00000563348 PLSCR1O15162 318 aa26.1■■□□□ 1.77
TRADD-203ENST00000563348 NSD2O96028 1365 aa26.08■■□□□ 1.77
TRADD-203ENST00000563348 TNNT2P45379 298 aaPredicted RBP26.08■■□□□ 1.77
TRADD-203ENST00000563348 USHBP1Q8N6Y0 703 aa26.08■■□□□ 1.77
TRADD-203ENST00000563348 DDX54Q8TDD1 881 aaKnown RBP26.07■■□□□ 1.76
TRADD-203ENST00000563348 KCNQ2O43526 872 aa26.06■■□□□ 1.76
TRADD-203ENST00000563348 ZCRB1Q8TBF4 217 aaKnown RBP26.06■■□□□ 1.76
TRADD-203ENST00000563348 SBF2Q86WG5 1849 aa26.06■■□□□ 1.76
TRADD-203ENST00000563348 SRCAPQ6ZRS2 3230 aa26.06■■□□□ 1.76
TRADD-203ENST00000563348 MORC1Q86VD1 984 aa26.05■■□□□ 1.76
TRADD-203ENST00000563348 RAPGEF4Q8WZA2 1011 aa26.05■■□□□ 1.76
TRADD-203ENST00000563348 PSDA5PKW4 1024 aaPredicted RBP26.04■■□□□ 1.76
TRADD-203ENST00000563348 ACSBG1Q96GR2 724 aa26.04■■□□□ 1.76
TRADD-203ENST00000563348 RGPD2P0DJD1 1756 aa26.03■■□□□ 1.76
TRADD-203ENST00000563348 AMER1Q5JTC6 1135 aaPredicted RBP26.03■■□□□ 1.76
TRADD-203ENST00000563348 PER1O15534 1290 aaPredicted RBP26.02■■□□□ 1.76
TRADD-203ENST00000563348 TATP17735 454 aaPredicted RBP26.02■■□□□ 1.76
TRADD-203ENST00000563348 R3HDM1Q15032 1099 aaKnown RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms