RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 NFAT5O94916 1531 aa22.07■■□□□ 1.12
USB1-208ENST00000563207 NME9Q86XW9 330 aa22.07■■□□□ 1.12
USB1-208ENST00000563207 CAMKK2Q96RR4 588 aa22.07■■□□□ 1.12
USB1-208ENST00000563207 TTC21AQ8NDW8 1320 aa22.06■■□□□ 1.12
USB1-208ENST00000563207 TOM1L2Q6ZVM7 507 aa22.06■■□□□ 1.12
USB1-208ENST00000563207 THRAP3Q9Y2W1 955 aaKnown RBP22.06■■□□□ 1.12
USB1-208ENST00000563207 DISP2A7MBM2 1401 aa22.06■■□□□ 1.12
USB1-208ENST00000563207 APBA3O96018 575 aa22.05■■□□□ 1.12
USB1-208ENST00000563207 LRRC37A3O60309 1634 aa22.05■■□□□ 1.12
USB1-208ENST00000563207 WNK3Q9BYP7 1800 aa22.04■■□□□ 1.12
USB1-208ENST00000563207 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
USB1-208ENST00000563207 ST20-MTHFSA0A0A6YYL1 179 aa22.03■■□□□ 1.12
USB1-208ENST00000563207 R3HDM1Q15032 1099 aaKnown RBP22.03■■□□□ 1.12
USB1-208ENST00000563207 PTF1AQ7RTS3 328 aa22.03■■□□□ 1.12
USB1-208ENST00000563207 TESK2Q96S53 571 aa22.03■■□□□ 1.12
USB1-208ENST00000563207 WDR17Q8IZU2 1322 aa22.03■■□□□ 1.12
USB1-208ENST00000563207 KCNH5Q8NCM2 988 aa22.02■■□□□ 1.12
USB1-208ENST00000563207 A0A1W2PP64 1363 aa22■■□□□ 1.11
USB1-208ENST00000563207 SBF2Q86WG5 1849 aa22■■□□□ 1.11
USB1-208ENST00000563207 USP31Q70CQ4 1352 aa21.99■■□□□ 1.11
USB1-208ENST00000563207 LTN1O94822 1766 aa21.99■■□□□ 1.11
USB1-208ENST00000563207 USP54Q70EL1 1684 aa21.99■■□□□ 1.11
USB1-208ENST00000563207 RREB1Q92766 1687 aa21.99■■□□□ 1.11
USB1-208ENST00000563207 NUP188Q5SRE5 1749 aa21.98■■□□□ 1.11
USB1-208ENST00000563207 CSB-PGBD3P0DP91 1061 aa21.98■■□□□ 1.11
USB1-208ENST00000563207 DDB1Q16531 1140 aa21.98■■□□□ 1.11
USB1-208ENST00000563207 HDGFL2Q7Z4V5 671 aaPredicted RBP21.97■■□□□ 1.11
USB1-208ENST00000563207 MARCH10Q8NA82 808 aaPredicted RBP21.97■■□□□ 1.11
USB1-208ENST00000563207 LRP5O75197 1615 aa21.97■■□□□ 1.11
USB1-208ENST00000563207 CARD10Q9BWT7 1032 aa21.95■■□□□ 1.1
USB1-208ENST00000563207 EDC4Q6P2E9 1401 aaKnown RBP21.95■■□□□ 1.1
USB1-208ENST00000563207 SLC24A1O60721 1099 aa21.94■■□□□ 1.1
USB1-208ENST00000563207 FBLN1P23142 703 aa21.94■■□□□ 1.1
USB1-208ENST00000563207 OVOS2A0A0G2JMS6 1433 aa21.94■■□□□ 1.1
USB1-208ENST00000563207 OVOS2A0A0J9YW53 1432 aa21.94■■□□□ 1.1
USB1-208ENST00000563207 OVOS2Q6IE36 1432 aa21.94■■□□□ 1.1
USB1-208ENST00000563207 TERF2IPQ9NYB0 399 aa21.93■■□□□ 1.1
USB1-208ENST00000563207 PUS7Q96PZ0 661 aaKnown RBP21.91■■□□□ 1.1
USB1-208ENST00000563207 PARD3Q8TEW0 1356 aa21.89■■□□□ 1.1
USB1-208ENST00000563207 USP47Q96K76 1375 aa21.89■■□□□ 1.1
USB1-208ENST00000563207 ERBB3P21860 1342 aa21.89■■□□□ 1.1
USB1-208ENST00000563207 ZEB1P37275 1124 aaPredicted RBP21.89■■□□□ 1.09
USB1-208ENST00000563207 NLRP2Q9NX02 1062 aa21.89■■□□□ 1.09
USB1-208ENST00000563207 ABCC6O95255 1503 aa21.89■■□□□ 1.09
USB1-208ENST00000563207 ANKRD24Q8TF21 1146 aa21.88■■□□□ 1.09
USB1-208ENST00000563207 CCDC7Q96M83 1385 aa21.87■■□□□ 1.09
USB1-208ENST00000563207 EXOC5O00471 708 aa21.86■■□□□ 1.09
USB1-208ENST00000563207 PROM2Q8N271 834 aa21.86■■□□□ 1.09
USB1-208ENST00000563207 CDCA7Q9BWT1 371 aaPredicted RBP21.86■■□□□ 1.09
USB1-208ENST00000563207 KCNQ2O43526 872 aa21.85■■□□□ 1.09
USB1-208ENST00000563207 LTV1Q96GA3 475 aaPredicted RBP21.85■■□□□ 1.09
USB1-208ENST00000563207 BCL11BQ9C0K0 894 aaPredicted RBP21.85■■□□□ 1.09
USB1-208ENST00000563207 EIF4G2P78344 907 aaKnown RBP eCLIP21.84■■□□□ 1.09
USB1-208ENST00000563207 RGPD2P0DJD1 1756 aa21.84■■□□□ 1.09
USB1-208ENST00000563207 TNS2Q63HR2 1409 aa21.83■■□□□ 1.09
USB1-208ENST00000563207 ANO8Q9HCE9 1232 aaPredicted RBP21.83■■□□□ 1.09
USB1-208ENST00000563207 PLSCR1O15162 318 aa21.82■■□□□ 1.08
USB1-208ENST00000563207 IP6K1Q92551 441 aa21.82■■□□□ 1.08
USB1-208ENST00000563207 ACSBG1Q96GR2 724 aa21.82■■□□□ 1.08
USB1-208ENST00000563207 RGPD3A6NKT7 1758 aaPredicted RBP21.82■■□□□ 1.08
USB1-208ENST00000563207 RGPD4Q7Z3J3 1758 aa21.82■■□□□ 1.08
USB1-208ENST00000563207 MAP3K19Q56UN5 1328 aa21.81■■□□□ 1.08
USB1-208ENST00000563207 BCL9O00512 1426 aa21.81■■□□□ 1.08
USB1-208ENST00000563207 C11orf95C9JLR9 678 aaPredicted RBP21.81■■□□□ 1.08
USB1-208ENST00000563207 PDGFDQ9GZP0 370 aaPredicted RBP21.81■■□□□ 1.08
USB1-208ENST00000563207 GGNBP2Q9H3C7 697 aa21.81■■□□□ 1.08
USB1-208ENST00000563207 ANKRD36BQ8N2N9 1353 aa21.81■■□□□ 1.08
USB1-208ENST00000563207 NINLQ9Y2I6 1382 aa21.81■■□□□ 1.08
USB1-208ENST00000563207 IL2RBP14784 551 aa21.8■■□□□ 1.08
USB1-208ENST00000563207 TMF1P82094 1093 aa21.8■■□□□ 1.08
USB1-208ENST00000563207 NBPF14Q5TI25 921 aa21.8■■□□□ 1.08
USB1-208ENST00000563207 COG3Q96JB2 828 aa21.8■■□□□ 1.08
USB1-208ENST00000563207 FYB1O15117 783 aa21.79■■□□□ 1.08
USB1-208ENST00000563207 HOXC9P31274 260 aa21.78■■□□□ 1.08
USB1-208ENST00000563207 RRS1Q15050 365 aaKnown RBP21.78■■□□□ 1.08
USB1-208ENST00000563207 MYOM1P52179 1685 aa21.77■■□□□ 1.08
USB1-208ENST00000563207 NHSQ6T4R5 1651 aa21.77■■□□□ 1.08
USB1-208ENST00000563207 FAM208AQ9UK61 1670 aaKnown RBP21.75■■□□□ 1.07
USB1-208ENST00000563207 TXNRD1Q16881 649 aa21.75■■□□□ 1.07
USB1-208ENST00000563207 CDCA8Q53HL2 280 aa21.75■■□□□ 1.07
USB1-208ENST00000563207 CARD14Q9BXL6 1004 aa21.75■■□□□ 1.07
USB1-208ENST00000563207 HSPA5P11021 654 aaKnown RBP21.74■■□□□ 1.07
USB1-208ENST00000563207 AMPHP49418 695 aa21.74■■□□□ 1.07
USB1-208ENST00000563207 KIF20BQ96Q89 1820 aa21.73■■□□□ 1.07
USB1-208ENST00000563207 CASZ1Q86V15 1759 aa21.73■■□□□ 1.07
USB1-208ENST00000563207 BTAF1O14981 1849 aa21.73■■□□□ 1.07
USB1-208ENST00000563207 DDX54Q8TDD1 881 aaKnown RBP21.72■■□□□ 1.07
USB1-208ENST00000563207 SHANK3Q9BYB0 1731 aa21.72■■□□□ 1.07
USB1-208ENST00000563207 KAT6BQ8WYB5 2073 aa21.71■■□□□ 1.07
USB1-208ENST00000563207 USHBP1Q8N6Y0 703 aa21.71■■□□□ 1.07
USB1-208ENST00000563207 NBPF6Q5VWK0 638 aa21.7■■□□□ 1.06
USB1-208ENST00000563207 NBPF4Q96M43 638 aa21.7■■□□□ 1.06
USB1-208ENST00000563207 MEGF6O75095 1541 aa21.69■■□□□ 1.06
USB1-208ENST00000563207 HSP90AB2PQ58FF8 381 aa21.68■■□□□ 1.06
USB1-208ENST00000563207 ZBTB7AO95365 584 aa21.67■■□□□ 1.06
USB1-208ENST00000563207 SPON1Q9HCB6 807 aa21.67■■□□□ 1.06
USB1-208ENST00000563207 NSD3Q9BZ95 1437 aa21.66■■□□□ 1.06
USB1-208ENST00000563207 LRRC4BQ9NT99 713 aa21.66■■□□□ 1.06
USB1-208ENST00000563207 SLC15A2Q16348 729 aa21.65■■□□□ 1.06
USB1-208ENST00000563207 DOT1LQ8TEK3 1739 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms