RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 NFAT5O94916 1531 aa23.68■■□□□ 1.38
TNRC6A-209ENST00000562829 RGPD5Q99666 1765 aa23.68■■□□□ 1.38
TNRC6A-209ENST00000562829 PSDA5PKW4 1024 aaPredicted RBP23.67■■□□□ 1.38
TNRC6A-209ENST00000562829 NME9Q86XW9 330 aa23.67■■□□□ 1.38
TNRC6A-209ENST00000562829 ST20-MTHFSA0A0A6YYL1 179 aa23.66■■□□□ 1.38
TNRC6A-209ENST00000562829 APBA3O96018 575 aa23.66■■□□□ 1.38
TNRC6A-209ENST00000562829 EZH2Q15910 746 aaKnown RBP23.66■■□□□ 1.38
TNRC6A-209ENST00000562829 TERF2IPQ9NYB0 399 aa23.66■■□□□ 1.38
TNRC6A-209ENST00000562829 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
TNRC6A-209ENST00000562829 LRRC37A3O60309 1634 aa23.64■■□□□ 1.38
TNRC6A-209ENST00000562829 DDB1Q16531 1140 aa23.64■■□□□ 1.37
TNRC6A-209ENST00000562829 EDC4Q6P2E9 1401 aaKnown RBP23.64■■□□□ 1.37
TNRC6A-209ENST00000562829 USP31Q70CQ4 1352 aa23.64■■□□□ 1.37
TNRC6A-209ENST00000562829 WNK3Q9BYP7 1800 aa23.63■■□□□ 1.37
TNRC6A-209ENST00000562829 PUS7Q96PZ0 661 aaKnown RBP23.63■■□□□ 1.37
TNRC6A-209ENST00000562829 TESK2Q96S53 571 aa23.63■■□□□ 1.37
TNRC6A-209ENST00000562829 USP54Q70EL1 1684 aa23.63■■□□□ 1.37
TNRC6A-209ENST00000562829 OVOS2A0A0G2JMS6 1433 aa23.61■■□□□ 1.37
TNRC6A-209ENST00000562829 OVOS2A0A0J9YW53 1432 aa23.61■■□□□ 1.37
TNRC6A-209ENST00000562829 OVOS2Q6IE36 1432 aa23.61■■□□□ 1.37
TNRC6A-209ENST00000562829 SRCAPQ6ZRS2 3230 aa23.61■■□□□ 1.37
TNRC6A-209ENST00000562829 ABCC6O95255 1503 aa23.6■■□□□ 1.37
TNRC6A-209ENST00000562829 SLC24A1O60721 1099 aa23.6■■□□□ 1.37
TNRC6A-209ENST00000562829 CAMKK2Q96RR4 588 aa23.6■■□□□ 1.37
TNRC6A-209ENST00000562829 C11orf95C9JLR9 678 aaPredicted RBP23.59■■□□□ 1.37
TNRC6A-209ENST00000562829 R3HDM1Q15032 1099 aaKnown RBP23.59■■□□□ 1.37
TNRC6A-209ENST00000562829 CDCA7Q9BWT1 371 aaPredicted RBP23.59■■□□□ 1.37
TNRC6A-209ENST00000562829 CARD10Q9BWT7 1032 aa23.59■■□□□ 1.37
TNRC6A-209ENST00000562829 PARD3Q8TEW0 1356 aa23.59■■□□□ 1.37
TNRC6A-209ENST00000562829 NINLQ9Y2I6 1382 aa23.59■■□□□ 1.37
TNRC6A-209ENST00000562829 LTN1O94822 1766 aa23.59■■□□□ 1.37
TNRC6A-209ENST00000562829 USP47Q96K76 1375 aa23.58■■□□□ 1.37
TNRC6A-209ENST00000562829 CCDC7Q96M83 1385 aa23.56■■□□□ 1.36
TNRC6A-209ENST00000562829 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
TNRC6A-209ENST00000562829 PEAK1Q9H792 1746 aa23.56■■□□□ 1.36
TNRC6A-209ENST00000562829 LRP5O75197 1615 aa23.55■■□□□ 1.36
TNRC6A-209ENST00000562829 RREB1Q92766 1687 aa23.54■■□□□ 1.36
TNRC6A-209ENST00000562829 TMF1P82094 1093 aa23.54■■□□□ 1.36
TNRC6A-209ENST00000562829 NLRP2Q9NX02 1062 aa23.53■■□□□ 1.36
TNRC6A-209ENST00000562829 ERBB3P21860 1342 aa23.53■■□□□ 1.36
TNRC6A-209ENST00000562829 SBF2Q86WG5 1849 aa23.52■■□□□ 1.36
TNRC6A-209ENST00000562829 NUP188Q5SRE5 1749 aa23.52■■□□□ 1.36
TNRC6A-209ENST00000562829 EXOC5O00471 708 aa23.51■■□□□ 1.35
TNRC6A-209ENST00000562829 MARCH10Q8NA82 808 aaPredicted RBP23.51■■□□□ 1.35
TNRC6A-209ENST00000562829 COG3Q96JB2 828 aa23.51■■□□□ 1.35
TNRC6A-209ENST00000562829 ANKRD24Q8TF21 1146 aa23.5■■□□□ 1.35
TNRC6A-209ENST00000562829 ANKRD36BQ8N2N9 1353 aa23.5■■□□□ 1.35
TNRC6A-209ENST00000562829 NBPF14Q5TI25 921 aa23.49■■□□□ 1.35
TNRC6A-209ENST00000562829 TNS2Q63HR2 1409 aa23.49■■□□□ 1.35
TNRC6A-209ENST00000562829 BCL11BQ9C0K0 894 aaPredicted RBP23.47■■□□□ 1.35
TNRC6A-209ENST00000562829 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
TNRC6A-209ENST00000562829 TIMELESSQ9UNS1 1208 aa23.46■■□□□ 1.35
TNRC6A-209ENST00000562829 IL2RBP14784 551 aa23.45■■□□□ 1.34
TNRC6A-209ENST00000562829 CDCA8Q53HL2 280 aa23.45■■□□□ 1.34
TNRC6A-209ENST00000562829 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
TNRC6A-209ENST00000562829 BCL9O00512 1426 aa23.44■■□□□ 1.34
TNRC6A-209ENST00000562829 PTF1AQ7RTS3 328 aa23.44■■□□□ 1.34
TNRC6A-209ENST00000562829 IP6K1Q92551 441 aa23.44■■□□□ 1.34
TNRC6A-209ENST00000562829 RGPD3A6NKT7 1758 aaPredicted RBP23.44■■□□□ 1.34
TNRC6A-209ENST00000562829 RGPD4Q7Z3J3 1758 aa23.44■■□□□ 1.34
TNRC6A-209ENST00000562829 PLSCR1O15162 318 aa23.43■■□□□ 1.34
TNRC6A-209ENST00000562829 AMPHP49418 695 aa23.42■■□□□ 1.34
TNRC6A-209ENST00000562829 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
TNRC6A-209ENST00000562829 MAP3K19Q56UN5 1328 aa23.41■■□□□ 1.34
TNRC6A-209ENST00000562829 GGNBP2Q9H3C7 697 aa23.41■■□□□ 1.34
TNRC6A-209ENST00000562829 FBLN1P23142 703 aa23.4■■□□□ 1.34
TNRC6A-209ENST00000562829 HOXC9P31274 260 aa23.39■■□□□ 1.33
TNRC6A-209ENST00000562829 FYB1O15117 783 aa23.38■■□□□ 1.33
TNRC6A-209ENST00000562829 ACSBG1Q96GR2 724 aa23.38■■□□□ 1.33
TNRC6A-209ENST00000562829 KIF20BQ96Q89 1820 aa23.38■■□□□ 1.33
TNRC6A-209ENST00000562829 NHSQ6T4R5 1651 aa23.37■■□□□ 1.33
TNRC6A-209ENST00000562829 KCNQ2O43526 872 aa23.36■■□□□ 1.33
TNRC6A-209ENST00000562829 RRS1Q15050 365 aaKnown RBP23.36■■□□□ 1.33
TNRC6A-209ENST00000562829 MYOM1P52179 1685 aa23.35■■□□□ 1.33
TNRC6A-209ENST00000562829 RTL1A6NKG5 1358 aa23.35■■□□□ 1.33
TNRC6A-209ENST00000562829 KAT6BQ8WYB5 2073 aa23.34■■□□□ 1.33
TNRC6A-209ENST00000562829 CCER1Q8TC90 406 aaPredicted RBP23.34■■□□□ 1.33
TNRC6A-209ENST00000562829 ANO8Q9HCE9 1232 aaPredicted RBP23.34■■□□□ 1.33
TNRC6A-209ENST00000562829 TXNRD1Q16881 649 aa23.33■■□□□ 1.33
TNRC6A-209ENST00000562829 POLR3GLQ9BT43 218 aa23.33■■□□□ 1.33
TNRC6A-209ENST00000562829 RGPD2P0DJD1 1756 aa23.32■■□□□ 1.32
TNRC6A-209ENST00000562829 DDX54Q8TDD1 881 aaKnown RBP23.32■■□□□ 1.32
TNRC6A-209ENST00000562829 NSD3Q9BZ95 1437 aa23.32■■□□□ 1.32
TNRC6A-209ENST00000562829 PROM2Q8N271 834 aa23.31■■□□□ 1.32
TNRC6A-209ENST00000562829 SMG6Q86US8 1419 aaKnown RBP23.31■■□□□ 1.32
TNRC6A-209ENST00000562829 SPON1Q9HCB6 807 aa23.29■■□□□ 1.32
TNRC6A-209ENST00000562829 BTAF1O14981 1849 aa23.29■■□□□ 1.32
TNRC6A-209ENST00000562829 CARD14Q9BXL6 1004 aa23.28■■□□□ 1.32
TNRC6A-209ENST00000562829 STK32BQ9NY57 414 aa23.28■■□□□ 1.32
TNRC6A-209ENST00000562829 PPP1R1BQ9UD71 204 aaPredicted RBP23.28■■□□□ 1.32
TNRC6A-209ENST00000562829 USHBP1Q8N6Y0 703 aa23.26■■□□□ 1.31
TNRC6A-209ENST00000562829 FLT4P35916 1363 aa23.26■■□□□ 1.31
TNRC6A-209ENST00000562829 MEGF6O75095 1541 aa23.25■■□□□ 1.31
TNRC6A-209ENST00000562829 NBPF6Q5VWK0 638 aa23.25■■□□□ 1.31
TNRC6A-209ENST00000562829 NBPF4Q96M43 638 aa23.25■■□□□ 1.31
TNRC6A-209ENST00000562829 EIF4G2P78344 907 aaKnown RBP eCLIP23.24■■□□□ 1.31
TNRC6A-209ENST00000562829 HSP90AB2PQ58FF8 381 aa23.24■■□□□ 1.31
TNRC6A-209ENST00000562829 ZCRB1Q8TBF4 217 aaKnown RBP23.24■■□□□ 1.31
TNRC6A-209ENST00000562829 SYTL4Q96C24 671 aaPredicted RBP23.24■■□□□ 1.31
TNRC6A-209ENST00000562829 CASZ1Q86V15 1759 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms