RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 PPP1R1BQ9UD71 204 aaPredicted RBP23.71■■□□□ 1.39
CMTM3-205ENST00000562707 BCL11BQ9C0K0 894 aaPredicted RBP23.7■■□□□ 1.38
CMTM3-205ENST00000562707 KCNQ2O43526 872 aa23.69■■□□□ 1.38
CMTM3-205ENST00000562707 CPSF1Q10570 1443 aaKnown RBP23.68■■□□□ 1.38
CMTM3-205ENST00000562707 PARP4Q9UKK3 1724 aaKnown RBP23.68■■□□□ 1.38
CMTM3-205ENST00000562707 CARD10Q9BWT7 1032 aa23.68■■□□□ 1.38
CMTM3-205ENST00000562707 MARCH10Q8NA82 808 aaPredicted RBP23.67■■□□□ 1.38
CMTM3-205ENST00000562707 RREB1Q92766 1687 aa23.67■■□□□ 1.38
CMTM3-205ENST00000562707 EXOC5O00471 708 aa23.66■■□□□ 1.38
CMTM3-205ENST00000562707 KTN1Q86UP2 1357 aaKnown RBP23.65■■□□□ 1.38
CMTM3-205ENST00000562707 DCAF8L1A6NGE4 600 aa23.64■■□□□ 1.37
CMTM3-205ENST00000562707 NUP188Q5SRE5 1749 aa23.64■■□□□ 1.37
CMTM3-205ENST00000562707 TRPM1Q7Z4N2 1603 aa23.63■■□□□ 1.37
CMTM3-205ENST00000562707 PTF1AQ7RTS3 328 aa23.63■■□□□ 1.37
CMTM3-205ENST00000562707 PIK3C2AO00443 1686 aa23.63■■□□□ 1.37
CMTM3-205ENST00000562707 BCL9O00512 1426 aa23.6■■□□□ 1.37
CMTM3-205ENST00000562707 PEAK1Q9H792 1746 aa23.6■■□□□ 1.37
CMTM3-205ENST00000562707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.6■■□□□ 1.37
CMTM3-205ENST00000562707 CCDC7Q96M83 1385 aa23.6■■□□□ 1.37
CMTM3-205ENST00000562707 COL18A1P39060 1754 aa23.6■■□□□ 1.37
CMTM3-205ENST00000562707 LRRC37A3O60309 1634 aa23.59■■□□□ 1.37
CMTM3-205ENST00000562707 PROM2Q8N271 834 aa23.59■■□□□ 1.37
CMTM3-205ENST00000562707 ANO8Q9HCE9 1232 aaPredicted RBP23.59■■□□□ 1.37
CMTM3-205ENST00000562707 YY1P25490 414 aa23.58■■□□□ 1.37
CMTM3-205ENST00000562707 TMC1Q8TDI8 760 aa23.57■■□□□ 1.36
CMTM3-205ENST00000562707 CARD11Q9BXL7 1154 aa23.57■■□□□ 1.36
CMTM3-205ENST00000562707 NINLQ9Y2I6 1382 aa23.56■■□□□ 1.36
CMTM3-205ENST00000562707 TXNRD1Q16881 649 aa23.56■■□□□ 1.36
CMTM3-205ENST00000562707 HDGFL2Q7Z4V5 671 aaPredicted RBP23.56■■□□□ 1.36
CMTM3-205ENST00000562707 STK32BQ9NY57 414 aa23.56■■□□□ 1.36
CMTM3-205ENST00000562707 NLRP2Q9NX02 1062 aa23.55■■□□□ 1.36
CMTM3-205ENST00000562707 USP31Q70CQ4 1352 aa23.54■■□□□ 1.36
CMTM3-205ENST00000562707 SBNO2Q9Y2G9 1366 aa23.54■■□□□ 1.36
CMTM3-205ENST00000562707 NME9Q86XW9 330 aa23.54■■□□□ 1.36
CMTM3-205ENST00000562707 NFAT5O94916 1531 aa23.53■■□□□ 1.36
CMTM3-205ENST00000562707 ZBTB7AO95365 584 aa23.52■■□□□ 1.36
CMTM3-205ENST00000562707 RGPD3A6NKT7 1758 aaPredicted RBP23.51■■□□□ 1.35
CMTM3-205ENST00000562707 RGPD4Q7Z3J3 1758 aa23.51■■□□□ 1.35
CMTM3-205ENST00000562707 SLC15A2Q16348 729 aa23.51■■□□□ 1.35
CMTM3-205ENST00000562707 PDGFDQ9GZP0 370 aaPredicted RBP23.51■■□□□ 1.35
CMTM3-205ENST00000562707 SLC12A5Q9H2X9 1139 aa23.51■■□□□ 1.35
CMTM3-205ENST00000562707 ERBB3P21860 1342 aa23.51■■□□□ 1.35
CMTM3-205ENST00000562707 AKAP12Q02952 1782 aa23.5■■□□□ 1.35
CMTM3-205ENST00000562707 ABCC6O95255 1503 aa23.5■■□□□ 1.35
CMTM3-205ENST00000562707 IL2RBP14784 551 aa23.5■■□□□ 1.35
CMTM3-205ENST00000562707 TERF2IPQ9NYB0 399 aa23.5■■□□□ 1.35
CMTM3-205ENST00000562707 TNS2Q63HR2 1409 aa23.5■■□□□ 1.35
CMTM3-205ENST00000562707 ANKRD24Q8TF21 1146 aa23.49■■□□□ 1.35
CMTM3-205ENST00000562707 ACSBG1Q96GR2 724 aa23.49■■□□□ 1.35
CMTM3-205ENST00000562707 ATF5Q9Y2D1 282 aaPredicted RBP23.49■■□□□ 1.35
CMTM3-205ENST00000562707 SBF2Q86WG5 1849 aa23.47■■□□□ 1.35
CMTM3-205ENST00000562707 PUS7Q96PZ0 661 aaKnown RBP23.46■■□□□ 1.35
CMTM3-205ENST00000562707 CD163L1Q9NR16 1453 aa23.45■■□□□ 1.34
CMTM3-205ENST00000562707 EDC4Q6P2E9 1401 aaKnown RBP23.45■■□□□ 1.34
CMTM3-205ENST00000562707 PTGER2P43116 358 aa23.45■■□□□ 1.34
CMTM3-205ENST00000562707 WNK3Q9BYP7 1800 aa23.45■■□□□ 1.34
CMTM3-205ENST00000562707 TONSLQ96HA7 1378 aa23.43■■□□□ 1.34
CMTM3-205ENST00000562707 RGPD5Q99666 1765 aa23.43■■□□□ 1.34
CMTM3-205ENST00000562707 MTFR1LQ9H019 292 aa23.43■■□□□ 1.34
CMTM3-205ENST00000562707 MON2Q7Z3U7 1717 aa23.42■■□□□ 1.34
CMTM3-205ENST00000562707 IP6K1Q92551 441 aa23.41■■□□□ 1.34
CMTM3-205ENST00000562707 A0A1W2PP64 1363 aa23.4■■□□□ 1.34
CMTM3-205ENST00000562707 CASZ1Q86V15 1759 aa23.4■■□□□ 1.34
CMTM3-205ENST00000562707 LTV1Q96GA3 475 aaPredicted RBP23.39■■□□□ 1.33
CMTM3-205ENST00000562707 SLC24A1O60721 1099 aa23.38■■□□□ 1.33
CMTM3-205ENST00000562707 DDX54Q8TDD1 881 aaKnown RBP23.38■■□□□ 1.33
CMTM3-205ENST00000562707 SYT17Q9BSW7 474 aa23.38■■□□□ 1.33
CMTM3-205ENST00000562707 FHDC1Q9C0D6 1143 aaPredicted RBP23.38■■□□□ 1.33
CMTM3-205ENST00000562707 COG3Q96JB2 828 aa23.37■■□□□ 1.33
CMTM3-205ENST00000562707 USP54Q70EL1 1684 aa23.35■■□□□ 1.33
CMTM3-205ENST00000562707 ARXQ96QS3 562 aa23.34■■□□□ 1.33
CMTM3-205ENST00000562707 SGIP1Q9BQI5 828 aa23.34■■□□□ 1.33
CMTM3-205ENST00000562707 NHSQ6T4R5 1651 aa23.34■■□□□ 1.33
CMTM3-205ENST00000562707 ST20-MTHFSA0A0A6YYL1 179 aa23.33■■□□□ 1.33
CMTM3-205ENST00000562707 AMPHP49418 695 aa23.33■■□□□ 1.33
CMTM3-205ENST00000562707 SLC27A3Q5K4L6 730 aa23.32■■□□□ 1.32
CMTM3-205ENST00000562707 TESK2Q96S53 571 aa23.32■■□□□ 1.32
CMTM3-205ENST00000562707 LRRC4BQ9NT99 713 aa23.32■■□□□ 1.32
CMTM3-205ENST00000562707 ZNF827Q17R98 1081 aa23.31■■□□□ 1.32
CMTM3-205ENST00000562707 SYTL4Q96C24 671 aaPredicted RBP23.31■■□□□ 1.32
CMTM3-205ENST00000562707 MAP3K19Q56UN5 1328 aa23.31■■□□□ 1.32
CMTM3-205ENST00000562707 MYOM1P52179 1685 aa23.3■■□□□ 1.32
CMTM3-205ENST00000562707 HOXC9P31274 260 aa23.3■■□□□ 1.32
CMTM3-205ENST00000562707 LTN1O94822 1766 aa23.28■■□□□ 1.32
CMTM3-205ENST00000562707 PRIM1P49642 420 aaKnown RBP23.28■■□□□ 1.32
CMTM3-205ENST00000562707 ZCRB1Q8TBF4 217 aaKnown RBP23.28■■□□□ 1.32
CMTM3-205ENST00000562707 SLC16A10Q8TF71 515 aa23.28■■□□□ 1.32
CMTM3-205ENST00000562707 AKT1S1Q96B36 256 aa23.28■■□□□ 1.32
CMTM3-205ENST00000562707 FBLN1P23142 703 aa23.27■■□□□ 1.32
CMTM3-205ENST00000562707 POLD1P28340 1107 aa23.25■■□□□ 1.31
CMTM3-205ENST00000562707 TFCP2L1Q9NZI6 479 aa23.25■■□□□ 1.31
CMTM3-205ENST00000562707 ANKRD36BQ8N2N9 1353 aa23.25■■□□□ 1.31
CMTM3-205ENST00000562707 ZNF784Q8NCA9 323 aaPredicted RBP23.24■■□□□ 1.31
CMTM3-205ENST00000562707 TMF1P82094 1093 aa23.23■■□□□ 1.31
CMTM3-205ENST00000562707 MAP3K5Q99683 1374 aa23.23■■□□□ 1.31
CMTM3-205ENST00000562707 PAPPAQ13219 1627 aa23.22■■□□□ 1.31
CMTM3-205ENST00000562707 BTAF1O14981 1849 aa23.22■■□□□ 1.31
CMTM3-205ENST00000562707 FYB1O15117 783 aa23.21■■□□□ 1.31
CMTM3-205ENST00000562707 KCNQ4P56696 695 aa23.21■■□□□ 1.31
CMTM3-205ENST00000562707 RRS1Q15050 365 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms