RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 KCNA6P17658 529 aa12.62□□□□□ -0.39
SMG1-205ENST00000561947 ZKSCAN2Q63HK3 967 aa12.62□□□□□ -0.39
SMG1-205ENST00000561947 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
SMG1-205ENST00000561947 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
SMG1-205ENST00000561947 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
SMG1-205ENST00000561947 CALD1Q05682 793 aaKnown RBP12.61□□□□□ -0.39
SMG1-205ENST00000561947 PMFBP1Q8TBY8 1022 aa12.61□□□□□ -0.39
SMG1-205ENST00000561947 PIK3C2AO00443 1686 aa12.6□□□□□ -0.39
SMG1-205ENST00000561947 IGHDP01880 384 aa12.6□□□□□ -0.39
SMG1-205ENST00000561947 EIF4A2Q14240 407 aaKnown RBP12.6□□□□□ -0.39
SMG1-205ENST00000561947 SSH1Q8WYL5 1049 aa12.6□□□□□ -0.39
SMG1-205ENST00000561947 SETD1BQ9UPS6 1966 aaKnown RBP12.6□□□□□ -0.39
SMG1-205ENST00000561947 ANKLE2Q86XL3 938 aa12.59□□□□□ -0.39
SMG1-205ENST00000561947 NGDNQ8NEJ9 315 aaKnown RBP12.59□□□□□ -0.39
SMG1-205ENST00000561947 LMOD3Q0VAK6 560 aa12.59□□□□□ -0.39
SMG1-205ENST00000561947 MVPQ14764 893 aaKnown RBP12.58□□□□□ -0.4
SMG1-205ENST00000561947 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.4
SMG1-205ENST00000561947 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
SMG1-205ENST00000561947 IFT57Q9NWB7 429 aa12.58□□□□□ -0.4
SMG1-205ENST00000561947 GNAI1P63096 354 aa12.57□□□□□ -0.4
SMG1-205ENST00000561947 ALDH1L2Q3SY69 923 aa12.57□□□□□ -0.4
SMG1-205ENST00000561947 FTSJ3Q8IY81 847 aaKnown RBP12.57□□□□□ -0.4
SMG1-205ENST00000561947 MARF1Q9Y4F3 1742 aaKnown RBP12.57□□□□□ -0.4
SMG1-205ENST00000561947 ZNF428Q96B54 188 aa12.57□□□□□ -0.4
SMG1-205ENST00000561947 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
SMG1-205ENST00000561947 LAS1LQ9Y4W2 734 aaKnown RBP12.57□□□□□ -0.4
SMG1-205ENST00000561947 KIF16BQ96L93 1317 aa12.57□□□□□ -0.4
SMG1-205ENST00000561947 ZNF853P0CG23 659 aa12.56□□□□□ -0.4
SMG1-205ENST00000561947 TRIM27P14373 513 aa12.56□□□□□ -0.4
SMG1-205ENST00000561947 ERICH6Q7L0X2 663 aa12.56□□□□□ -0.4
SMG1-205ENST00000561947 HSP90AB2PQ58FF8 381 aa12.56□□□□□ -0.4
SMG1-205ENST00000561947 SULT6B1Q6IMI4 303 aa12.56□□□□□ -0.4
SMG1-205ENST00000561947 ATF7IPQ6VMQ6 1270 aa12.56□□□□□ -0.4
SMG1-205ENST00000561947 AEBP1Q8IUX7 1158 aa12.56□□□□□ -0.4
SMG1-205ENST00000561947 IPO9Q96P70 1041 aaKnown RBP12.56□□□□□ -0.4
SMG1-205ENST00000561947 PCDHB15Q9Y5E8 787 aa12.56□□□□□ -0.4
SMG1-205ENST00000561947 NOB1Q9ULX3 412 aaKnown RBP12.55□□□□□ -0.4
SMG1-205ENST00000561947 MAP3K19Q56UN5 1328 aa12.55□□□□□ -0.4
SMG1-205ENST00000561947 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
SMG1-205ENST00000561947 ARHGEF10O15013 1369 aa12.55□□□□□ -0.4
SMG1-205ENST00000561947 FLT4P35916 1363 aa12.55□□□□□ -0.4
SMG1-205ENST00000561947 SOX12O15370 315 aa12.55□□□□□ -0.4
SMG1-205ENST00000561947 RGS3P49796 1198 aa12.55□□□□□ -0.4
SMG1-205ENST00000561947 VIRMAQ69YN4 1812 aaKnown RBP12.54□□□□□ -0.4
SMG1-205ENST00000561947 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
SMG1-205ENST00000561947 BRPF1P55201 1214 aaPredicted RBP12.54□□□□□ -0.4
SMG1-205ENST00000561947 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
SMG1-205ENST00000561947 FAM161AQ3B820 660 aa12.54□□□□□ -0.4
SMG1-205ENST00000561947 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
SMG1-205ENST00000561947 NOP58Q9Y2X3 529 aaKnown RBP12.54□□□□□ -0.4
SMG1-205ENST00000561947 VAMP4O75379 141 aa12.53□□□□□ -0.4
SMG1-205ENST00000561947 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
SMG1-205ENST00000561947 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
SMG1-205ENST00000561947 FAM83GA6ND36 823 aa12.52□□□□□ -0.41
SMG1-205ENST00000561947 MYT1Q01538 1121 aa12.52□□□□□ -0.41
SMG1-205ENST00000561947 RWDD1Q9H446 243 aaPredicted RBP12.52□□□□□ -0.41
SMG1-205ENST00000561947 NPHP4O75161 1426 aaPredicted RBP12.52□□□□□ -0.41
SMG1-205ENST00000561947 ADGRL3Q9HAR2 1447 aa12.52□□□□□ -0.41
SMG1-205ENST00000561947 NLRP6P59044 892 aa12.52□□□□□ -0.41
SMG1-205ENST00000561947 C8orf34Q49A92 452 aa12.52□□□□□ -0.41
SMG1-205ENST00000561947 ITPRIPQ8IWB1 547 aa12.52□□□□□ -0.41
SMG1-205ENST00000561947 KIF24Q5T7B8 1368 aa12.51□□□□□ -0.41
SMG1-205ENST00000561947 AMPHP49418 695 aa12.51□□□□□ -0.41
SMG1-205ENST00000561947 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
SMG1-205ENST00000561947 TMEM57Q8N5G2 664 aa12.51□□□□□ -0.41
SMG1-205ENST00000561947 MRPL50Q8N5N7 158 aaKnown RBP12.51□□□□□ -0.41
SMG1-205ENST00000561947 TSPYL6Q8N831 410 aa12.51□□□□□ -0.41
SMG1-205ENST00000561947 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
SMG1-205ENST00000561947 KDRP35968 1356 aa12.5□□□□□ -0.41
SMG1-205ENST00000561947 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
SMG1-205ENST00000561947 NWD1Q149M9 1564 aa12.49□□□□□ -0.41
SMG1-205ENST00000561947 IGSF1Q8N6C5 1336 aa12.49□□□□□ -0.41
SMG1-205ENST00000561947 PAK3O75914 559 aaPredicted RBP12.49□□□□□ -0.41
SMG1-205ENST00000561947 ARHGAP45Q92619 1136 aa12.49□□□□□ -0.41
SMG1-205ENST00000561947 ZBTB47Q9UFB7 747 aaPredicted RBP12.49□□□□□ -0.41
SMG1-205ENST00000561947 ABTB2Q8N961 1025 aa12.48□□□□□ -0.41
SMG1-205ENST00000561947 C8orf58Q8NAV2 365 aa12.48□□□□□ -0.41
SMG1-205ENST00000561947 LTN1O94822 1766 aa12.48□□□□□ -0.41
SMG1-205ENST00000561947 HDAC1Q13547 482 aaPredicted RBP12.48□□□□□ -0.41
SMG1-205ENST00000561947 PDZRN3Q9UPQ7 1066 aa12.48□□□□□ -0.41
SMG1-205ENST00000561947 ELL2O00472 640 aaPredicted RBP12.47□□□□□ -0.41
SMG1-205ENST00000561947 NUTM2GQ5VZR2 741 aa12.47□□□□□ -0.41
SMG1-205ENST00000561947 EYA1Q99502 592 aa12.47□□□□□ -0.41
SMG1-205ENST00000561947 ZBTB40Q9NUA8 1239 aa12.47□□□□□ -0.41
SMG1-205ENST00000561947 HOXC9P31274 260 aa12.47□□□□□ -0.41
SMG1-205ENST00000561947 RBM33Q96EV2 1170 aaKnown RBP12.47□□□□□ -0.41
SMG1-205ENST00000561947 CHL1O00533 1208 aa12.46□□□□□ -0.41
SMG1-205ENST00000561947 MCM10Q7L590 875 aa12.46□□□□□ -0.41
SMG1-205ENST00000561947 CRB1P82279 1406 aa12.46□□□□□ -0.41
SMG1-205ENST00000561947 RTL1A6NKG5 1358 aa12.46□□□□□ -0.41
SMG1-205ENST00000561947 MTHFSDQ2M296 383 aaKnown RBP12.45□□□□□ -0.42
SMG1-205ENST00000561947 KIAA0232Q92628 1395 aa12.45□□□□□ -0.42
SMG1-205ENST00000561947 NFAT5O94916 1531 aa12.45□□□□□ -0.42
SMG1-205ENST00000561947 ABCC4O15439 1325 aa12.45□□□□□ -0.42
SMG1-205ENST00000561947 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
SMG1-205ENST00000561947 LRRC37A3O60309 1634 aa12.44□□□□□ -0.42
SMG1-205ENST00000561947 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
SMG1-205ENST00000561947 C14orf37Q86TY3 774 aa12.44□□□□□ -0.42
SMG1-205ENST00000561947 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
SMG1-205ENST00000561947 CHMP4BQ9H444 224 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms