RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 H3BM21 787 aa5.42□□□□□ -1.54
CHD9-204ENST00000561869 ADH1CP00326 375 aa5.42□□□□□ -1.54
CHD9-204ENST00000561869 ARHGAP9Q9BRR9 750 aa5.42□□□□□ -1.54
CHD9-204ENST00000561869 GPSM3Q9Y4H4 160 aa5.42□□□□□ -1.54
CHD9-204ENST00000561869 MAGEB6P1A0A0J9YX57 407 aa5.41□□□□□ -1.54
CHD9-204ENST00000561869 NR3C2P08235 984 aa5.41□□□□□ -1.54
CHD9-204ENST00000561869 WDR4P57081 412 aaKnown RBP5.41□□□□□ -1.54
CHD9-204ENST00000561869 ARID5BQ14865 1188 aa5.41□□□□□ -1.54
CHD9-204ENST00000561869 MRPL14Q6P1L8 145 aaKnown RBP5.41□□□□□ -1.54
CHD9-204ENST00000561869 PURBQ96QR8 312 aaKnown RBP5.41□□□□□ -1.54
CHD9-204ENST00000561869 CARD14Q9BXL6 1004 aa5.41□□□□□ -1.54
CHD9-204ENST00000561869 ZFAND3Q9H8U3 227 aa5.41□□□□□ -1.54
CHD9-204ENST00000561869 MAP4K5Q9Y4K4 846 aa5.41□□□□□ -1.54
CHD9-204ENST00000561869 PTK2Q05397 1052 aa5.4□□□□□ -1.54
CHD9-204ENST00000561869 NR5A1Q13285 461 aa5.4□□□□□ -1.54
CHD9-204ENST00000561869 ADAM32Q8TC27 787 aa5.4□□□□□ -1.54
CHD9-204ENST00000561869 SLC16A10Q8TF71 515 aa5.4□□□□□ -1.54
CHD9-204ENST00000561869 ZBTB33Q86T24 672 aa5.39□□□□□ -1.55
CHD9-204ENST00000561869 NPAS3Q8IXF0 933 aa5.39□□□□□ -1.55
CHD9-204ENST00000561869 VASH1Q7L8A9 365 aaPredicted RBP5.38□□□□□ -1.55
CHD9-204ENST00000561869 PNMA1Q8ND90 353 aa5.38□□□□□ -1.55
CHD9-204ENST00000561869 IRF7Q92985 503 aa5.38□□□□□ -1.55
CHD9-204ENST00000561869 ITPKCQ96DU7 683 aa5.38□□□□□ -1.55
CHD9-204ENST00000561869 ZBBXA8MT70 800 aa5.37□□□□□ -1.55
CHD9-204ENST00000561869 ZIC2O95409 532 aaPredicted RBP5.37□□□□□ -1.55
CHD9-204ENST00000561869 FBXO45P0C2W1 286 aa5.37□□□□□ -1.55
CHD9-204ENST00000561869 FSHRP23945 695 aa5.37□□□□□ -1.55
CHD9-204ENST00000561869 KCTD15Q96SI1 283 aaPredicted RBP5.37□□□□□ -1.55
CHD9-204ENST00000561869 NDUFB9Q9Y6M9 179 aa5.37□□□□□ -1.55
CHD9-204ENST00000561869 SCARF1Q14162 830 aa5.36□□□□□ -1.55
CHD9-204ENST00000561869 C6orf118Q5T5N4 469 aa5.36□□□□□ -1.55
CHD9-204ENST00000561869 ZSCAN1Q8NBB4 408 aa5.36□□□□□ -1.55
CHD9-204ENST00000561869 SLC10A4Q96EP9 437 aa5.36□□□□□ -1.55
CHD9-204ENST00000561869 TBC1D2BQ9UPU7 963 aa5.36□□□□□ -1.55
CHD9-204ENST00000561869 ESPNB1AK53 854 aa5.35□□□□□ -1.55
CHD9-204ENST00000561869 IRF5Q13568 498 aa5.35□□□□□ -1.55
CHD9-204ENST00000561869 MCM6Q14566 821 aa5.35□□□□□ -1.55
CHD9-204ENST00000561869 TMEM132AQ24JP5 1023 aa5.35□□□□□ -1.55
CHD9-204ENST00000561869 INTS6LQ5JSJ4 861 aaKnown RBP5.35□□□□□ -1.55
CHD9-204ENST00000561869 CCDC116Q8IYX3 515 aa5.35□□□□□ -1.55
CHD9-204ENST00000561869 CDV3Q9UKY7 258 aaKnown RBP5.35□□□□□ -1.55
CHD9-204ENST00000561869 VSIG8P0DPA2 414 aa5.34□□□□□ -1.55
CHD9-204ENST00000561869 NR1H3Q13133 447 aa5.34□□□□□ -1.55
CHD9-204ENST00000561869 PPP1R26Q5T8A7 1209 aaPredicted RBP5.34□□□□□ -1.55
CHD9-204ENST00000561869 MEIOBQ8N635 442 aa5.34□□□□□ -1.55
CHD9-204ENST00000561869 APBB1O00213 710 aa5.33□□□□□ -1.56
CHD9-204ENST00000561869 DZIP3Q86Y13 1208 aaKnown RBP5.33□□□□□ -1.56
CHD9-204ENST00000561869 EMILIN1Q9Y6C2 1016 aa5.33□□□□□ -1.56
CHD9-204ENST00000561869 MAN1A2O60476 641 aa5.32□□□□□ -1.56
CHD9-204ENST00000561869 GIGYF1O75420 1035 aaPredicted RBP5.32□□□□□ -1.56
CHD9-204ENST00000561869 Q6ZVU0 165 aa5.32□□□□□ -1.56
CHD9-204ENST00000561869 LINC00528Q8N1L1 170 aa5.32□□□□□ -1.56
CHD9-204ENST00000561869 DNMT3LQ9UJW3 386 aa5.32□□□□□ -1.56
CHD9-204ENST00000561869 PCDHB9Q9Y5E1 797 aa5.32□□□□□ -1.56
CHD9-204ENST00000561869 ERVH48-1M5A8F1 160 aa5.31□□□□□ -1.56
CHD9-204ENST00000561869 LILRA1O75019 489 aa5.31□□□□□ -1.56
CHD9-204ENST00000561869 PPFIA3O75145 1194 aa5.31□□□□□ -1.56
CHD9-204ENST00000561869 BMP2P12643 396 aa5.31□□□□□ -1.56
CHD9-204ENST00000561869 CBLBQ13191 982 aa5.31□□□□□ -1.56
CHD9-204ENST00000561869 NBPF20Q3BBV1 942 aa5.31□□□□□ -1.56
CHD9-204ENST00000561869 GDPD2Q9HCC8 539 aa5.31□□□□□ -1.56
CHD9-204ENST00000561869 TMPRSS4Q9NRS4 437 aa5.31□□□□□ -1.56
CHD9-204ENST00000561869 SOS2Q07890 1332 aaPredicted RBP5.3□□□□□ -1.56
CHD9-204ENST00000561869 ADD1P35611 737 aaKnown RBP5.3□□□□□ -1.56
CHD9-204ENST00000561869 MCCD1P59942 119 aaPredicted RBP5.3□□□□□ -1.56
CHD9-204ENST00000561869 DHX9Q08211 1270 aaKnown RBP5.3□□□□□ -1.56
CHD9-204ENST00000561869 SEPT12Q8IYM1 358 aa5.3□□□□□ -1.56
CHD9-204ENST00000561869 PGPEP1Q9NXJ5 209 aa5.3□□□□□ -1.56
CHD9-204ENST00000561869 COG6Q9Y2V7 657 aa5.3□□□□□ -1.56
CHD9-204ENST00000561869 FAM181BA6NEQ2 426 aa5.29□□□□□ -1.56
CHD9-204ENST00000561869 RAB15P59190 212 aa5.29□□□□□ -1.56
CHD9-204ENST00000561869 KDF1Q8NAX2 398 aaPredicted RBP5.29□□□□□ -1.56
CHD9-204ENST00000561869 ZNF784Q8NCA9 323 aaPredicted RBP5.29□□□□□ -1.56
CHD9-204ENST00000561869 POM121Q96HA1 1249 aa5.29□□□□□ -1.56
CHD9-204ENST00000561869 ABL2P42684 1182 aa5.28□□□□□ -1.56
CHD9-204ENST00000561869 KRT76Q01546 638 aa5.28□□□□□ -1.56
CHD9-204ENST00000561869 GPR161Q8N6U8 529 aaKnown RBP5.28□□□□□ -1.56
CHD9-204ENST00000561869 PRM3Q9NNZ6 103 aa5.28□□□□□ -1.56
CHD9-204ENST00000561869 CEP126Q9P2H0 1117 aa5.28□□□□□ -1.56
CHD9-204ENST00000561869 SPINT1O43278 529 aa5.27□□□□□ -1.57
CHD9-204ENST00000561869 UPP2O95045 317 aa5.27□□□□□ -1.57
CHD9-204ENST00000561869 VAC14Q08AM6 782 aa5.27□□□□□ -1.57
CHD9-204ENST00000561869 FLIIQ13045 1269 aa5.27□□□□□ -1.57
CHD9-204ENST00000561869 PHTF2Q8N3S3 785 aa5.27□□□□□ -1.57
CHD9-204ENST00000561869 AGBL1Q96MI9 1066 aa5.27□□□□□ -1.57
CHD9-204ENST00000561869 TSEN34Q9BSV6 310 aaKnown RBP5.27□□□□□ -1.57
CHD9-204ENST00000561869 ZNF330Q9Y3S2 320 aaPredicted RBP5.27□□□□□ -1.57
CHD9-204ENST00000561869 FIGNL2A6NMB9 653 aa5.26□□□□□ -1.57
CHD9-204ENST00000561869 GSK3AP49840 483 aa5.26□□□□□ -1.57
CHD9-204ENST00000561869 RNF20Q5VTR2 975 aa5.26□□□□□ -1.57
CHD9-204ENST00000561869 CCDC125Q86Z20 511 aa5.26□□□□□ -1.57
CHD9-204ENST00000561869 CYLDQ9NQC7 956 aa5.26□□□□□ -1.57
CHD9-204ENST00000561869 TTLL8A6PVC2 850 aa5.25□□□□□ -1.57
CHD9-204ENST00000561869 ADH1AP07327 375 aa5.25□□□□□ -1.57
CHD9-204ENST00000561869 ERVK-9P63128 1117 aa5.25□□□□□ -1.57
CHD9-204ENST00000561869 EIF4G2P78344 907 aaKnown RBP eCLIP5.25□□□□□ -1.57
CHD9-204ENST00000561869 PTSQ03393 145 aa5.25□□□□□ -1.57
CHD9-204ENST00000561869 WASHC4Q2M389 1173 aa5.25□□□□□ -1.57
CHD9-204ENST00000561869 TSGA10IPQ3SY00 556 aa5.25□□□□□ -1.57
CHD9-204ENST00000561869 ZNF592Q92610 1267 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms