RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 ADH1CP00326 375 aa6.35□□□□□ -1.39
CTDSPL2-211ENST00000561189 ERFEQ4G0M1 354 aa6.35□□□□□ -1.39
CTDSPL2-211ENST00000561189 CCDC125Q86Z20 511 aa6.35□□□□□ -1.39
CTDSPL2-211ENST00000561189 ARHGAP9Q9BRR9 750 aa6.35□□□□□ -1.39
CTDSPL2-211ENST00000561189 ZBBXA8MT70 800 aa6.34□□□□□ -1.39
CTDSPL2-211ENST00000561189 NR5A1Q13285 461 aa6.34□□□□□ -1.39
CTDSPL2-211ENST00000561189 PKDCCQ504Y2 493 aa6.34□□□□□ -1.39
CTDSPL2-211ENST00000561189 TTC24A2A3L6 582 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-211ENST00000561189 PPP1R15AO75807 674 aaPredicted RBP6.33□□□□□ -1.4
CTDSPL2-211ENST00000561189 VAC14Q08AM6 782 aa6.33□□□□□ -1.4
CTDSPL2-211ENST00000561189 NR1H3Q13133 447 aa6.33□□□□□ -1.4
CTDSPL2-211ENST00000561189 HDGFL1Q5TGJ6 251 aa6.33□□□□□ -1.4
CTDSPL2-211ENST00000561189 GRM5P41594 1212 aa6.32□□□□□ -1.4
CTDSPL2-211ENST00000561189 AGERQ15109 404 aa6.32□□□□□ -1.4
CTDSPL2-211ENST00000561189 Q6ZNB5 142 aa6.32□□□□□ -1.4
CTDSPL2-211ENST00000561189 SEPT12Q8IYM1 358 aa6.32□□□□□ -1.4
CTDSPL2-211ENST00000561189 ADAM32Q8TC27 787 aa6.32□□□□□ -1.4
CTDSPL2-211ENST00000561189 FAM187AA6NFU0 413 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 POM121CA8CG34 1229 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 ESPNB1AK53 854 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 J3QL48 77 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 LCE2BO14633 110 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 ALDH1A1P00352 501 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 FBXO45P0C2W1 286 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 MYT1Q01538 1121 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 IRF5Q13568 498 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 NBPF20Q3BBV1 942 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 ZBTB33Q86T24 672 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 SLC10A4Q96EP9 437 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 KLF16Q9BXK1 252 aaPredicted RBP6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 TLL2Q9Y6L7 1015 aa6.31□□□□□ -1.4
CTDSPL2-211ENST00000561189 ZBTB7CA1YPR0 619 aa6.3□□□□□ -1.4
CTDSPL2-211ENST00000561189 TRAF7Q6Q0C0 670 aa6.3□□□□□ -1.4
CTDSPL2-211ENST00000561189 TRIM52Q96A61 297 aa6.3□□□□□ -1.4
CTDSPL2-211ENST00000561189 MAGEB6P1A0A0J9YX57 407 aa6.29□□□□□ -1.4
CTDSPL2-211ENST00000561189 WASF2Q9Y6W5 498 aa6.29□□□□□ -1.4
CTDSPL2-211ENST00000561189 DHX9Q08211 1270 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-211ENST00000561189 NNTQ13423 1086 aa6.28□□□□□ -1.4
CTDSPL2-211ENST00000561189 VASH1Q7L8A9 365 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-211ENST00000561189 AAASQ9NRG9 546 aa6.28□□□□□ -1.4
CTDSPL2-211ENST00000561189 CSB-PGBD3P0DP91 1061 aa6.27□□□□□ -1.41
CTDSPL2-211ENST00000561189 RFX1P22670 979 aa6.27□□□□□ -1.41
CTDSPL2-211ENST00000561189 HPS1Q92902 700 aa6.27□□□□□ -1.41
CTDSPL2-211ENST00000561189 PBXIP1Q96AQ6 731 aa6.27□□□□□ -1.41
CTDSPL2-211ENST00000561189 KCTD15Q96SI1 283 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-211ENST00000561189 CARD14Q9BXL6 1004 aa6.27□□□□□ -1.41
CTDSPL2-211ENST00000561189 EMILIN1Q9Y6C2 1016 aa6.27□□□□□ -1.41
CTDSPL2-211ENST00000561189 TIMP2P16035 220 aa6.26□□□□□ -1.41
CTDSPL2-211ENST00000561189 DZIP3Q86Y13 1208 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-211ENST00000561189 CCDC116Q8IYX3 515 aa6.26□□□□□ -1.41
CTDSPL2-211ENST00000561189 PPP1R12CQ9BZL4 782 aa6.26□□□□□ -1.41
CTDSPL2-211ENST00000561189 AXIN1O15169 862 aa6.25□□□□□ -1.41
CTDSPL2-211ENST00000561189 NR3C2P08235 984 aa6.25□□□□□ -1.41
CTDSPL2-211ENST00000561189 FSHRP23945 695 aa6.25□□□□□ -1.41
CTDSPL2-211ENST00000561189 LMOD1P29536 600 aaPredicted RBP6.25□□□□□ -1.41
CTDSPL2-211ENST00000561189 SLFNL1Q499Z3 407 aa6.25□□□□□ -1.41
CTDSPL2-211ENST00000561189 INTS6LQ5JSJ4 861 aaKnown RBP6.25□□□□□ -1.41
CTDSPL2-211ENST00000561189 RNF20Q5VTR2 975 aa6.25□□□□□ -1.41
CTDSPL2-211ENST00000561189 PCDHB9Q9Y5E1 797 aa6.25□□□□□ -1.41
CTDSPL2-211ENST00000561189 PATL2C9JE40 543 aaKnown RBP6.24□□□□□ -1.41
CTDSPL2-211ENST00000561189 Q6ZVU0 165 aa6.24□□□□□ -1.41
CTDSPL2-211ENST00000561189 KCTD17Q8N5Z5 321 aa6.24□□□□□ -1.41
CTDSPL2-211ENST00000561189 ALG2Q9H553 416 aa6.24□□□□□ -1.41
CTDSPL2-211ENST00000561189 CHIC2Q9UKJ5 165 aa6.24□□□□□ -1.41
CTDSPL2-211ENST00000561189 PALM3A6NDB9 673 aaPredicted RBP6.23□□□□□ -1.41
CTDSPL2-211ENST00000561189 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
CTDSPL2-211ENST00000561189 CAPN5O15484 640 aaPredicted RBP6.22□□□□□ -1.41
CTDSPL2-211ENST00000561189 WDR4P57081 412 aaKnown RBP6.22□□□□□ -1.41
CTDSPL2-211ENST00000561189 ARID5BQ14865 1188 aa6.22□□□□□ -1.41
CTDSPL2-211ENST00000561189 PPP1R26Q5T8A7 1209 aaPredicted RBP6.22□□□□□ -1.41
CTDSPL2-211ENST00000561189 MEIOBQ8N635 442 aa6.22□□□□□ -1.41
CTDSPL2-211ENST00000561189 TFIP11Q9UBB9 837 aaKnown RBP6.22□□□□□ -1.41
CTDSPL2-211ENST00000561189 ATP9BO43861 1147 aa6.21□□□□□ -1.42
CTDSPL2-211ENST00000561189 SKIP12755 728 aa6.21□□□□□ -1.42
CTDSPL2-211ENST00000561189 RNF135Q8IUD6 432 aa6.21□□□□□ -1.42
CTDSPL2-211ENST00000561189 PHTF2Q8N3S3 785 aa6.21□□□□□ -1.42
CTDSPL2-211ENST00000561189 NFATC2IPQ8NCF5 419 aa6.21□□□□□ -1.42
CTDSPL2-211ENST00000561189 ITPKCQ96DU7 683 aa6.21□□□□□ -1.42
CTDSPL2-211ENST00000561189 VRTNQ9H8Y1 702 aa6.21□□□□□ -1.42
CTDSPL2-211ENST00000561189 ATP13A2Q9NQ11 1180 aa6.21□□□□□ -1.42
CTDSPL2-211ENST00000561189 CEP126Q9P2H0 1117 aa6.21□□□□□ -1.42
CTDSPL2-211ENST00000561189 RBM19Q9Y4C8 960 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-211ENST00000561189 ST8SIA5O15466 376 aa6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 ZIC2O95409 532 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 B4GALNT3Q6L9W6 998 aa6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 RETREG2Q8NC44 543 aa6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 ADAMTS19Q8TE59 1207 aa6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 KIFC2Q96AC6 838 aa6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 TRAIPQ9BWF2 469 aa6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 ESF1Q9H501 851 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 SENP2Q9HC62 589 aa6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 PODXL2Q9NZ53 605 aa6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 USTQ9Y2C2 406 aa6.2□□□□□ -1.42
CTDSPL2-211ENST00000561189 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.19□□□□□ -1.42
CTDSPL2-211ENST00000561189 ERVH48-1M5A8F1 160 aa6.19□□□□□ -1.42
CTDSPL2-211ENST00000561189 LZTS3O60299 673 aaPredicted RBP6.19□□□□□ -1.42
CTDSPL2-211ENST00000561189 LILRA1O75019 489 aa6.19□□□□□ -1.42
CTDSPL2-211ENST00000561189 GIGYF1O75420 1035 aaPredicted RBP6.19□□□□□ -1.42
CTDSPL2-211ENST00000561189 ERVK-9P63128 1117 aa6.19□□□□□ -1.42
CTDSPL2-211ENST00000561189 LARP1Q6PKG0 1096 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms