RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 STRN4Q9NRL3 753 aa18.46■□□□□ 0.55
SMAD3-213ENST00000560175 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
SMAD3-213ENST00000560175 KRT27Q7Z3Y8 459 aa18.45■□□□□ 0.54
SMAD3-213ENST00000560175 CRB1P82279 1406 aa18.44■□□□□ 0.54
SMAD3-213ENST00000560175 HSPA5P11021 654 aaKnown RBP18.44■□□□□ 0.54
SMAD3-213ENST00000560175 FYB1O15117 783 aa18.42■□□□□ 0.54
SMAD3-213ENST00000560175 TCP11L2Q8N4U5 519 aa18.42■□□□□ 0.54
SMAD3-213ENST00000560175 CARD14Q9BXL6 1004 aa18.42■□□□□ 0.54
SMAD3-213ENST00000560175 WDR17Q8IZU2 1322 aa18.42■□□□□ 0.54
SMAD3-213ENST00000560175 LTN1O94822 1766 aa18.42■□□□□ 0.54
SMAD3-213ENST00000560175 PARP4Q9UKK3 1724 aaKnown RBP18.39■□□□□ 0.53
SMAD3-213ENST00000560175 BLMP54132 1417 aaPredicted RBP18.39■□□□□ 0.53
SMAD3-213ENST00000560175 SOX12O15370 315 aa18.38■□□□□ 0.53
SMAD3-213ENST00000560175 COG3Q96JB2 828 aa18.38■□□□□ 0.53
SMAD3-213ENST00000560175 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
SMAD3-213ENST00000560175 ZBTB7CA1YPR0 619 aa18.37■□□□□ 0.53
SMAD3-213ENST00000560175 USP35Q9P2H5 1018 aa18.37■□□□□ 0.53
SMAD3-213ENST00000560175 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
SMAD3-213ENST00000560175 IP6K1Q92551 441 aa18.36■□□□□ 0.53
SMAD3-213ENST00000560175 KIF20BQ96Q89 1820 aa18.36■□□□□ 0.53
SMAD3-213ENST00000560175 WNK3Q9BYP7 1800 aa18.35■□□□□ 0.53
SMAD3-213ENST00000560175 ERBB3P21860 1342 aa18.35■□□□□ 0.53
SMAD3-213ENST00000560175 TOM1L2Q6ZVM7 507 aa18.35■□□□□ 0.53
SMAD3-213ENST00000560175 A0A0G2JS52 829 aa18.34■□□□□ 0.53
SMAD3-213ENST00000560175 MYT1Q01538 1121 aa18.34■□□□□ 0.53
SMAD3-213ENST00000560175 DISP2A7MBM2 1401 aa18.33■□□□□ 0.53
SMAD3-213ENST00000560175 CDCA7Q9BWT1 371 aaPredicted RBP18.33■□□□□ 0.52
SMAD3-213ENST00000560175 GGNBP2Q9H3C7 697 aa18.33■□□□□ 0.52
SMAD3-213ENST00000560175 NSD3Q9BZ95 1437 aa18.32■□□□□ 0.52
SMAD3-213ENST00000560175 CCDC7Q96M83 1385 aa18.32■□□□□ 0.52
SMAD3-213ENST00000560175 MAP3K19Q56UN5 1328 aa18.32■□□□□ 0.52
SMAD3-213ENST00000560175 FBLN1P23142 703 aa18.32■□□□□ 0.52
SMAD3-213ENST00000560175 FAM196AQ6ZSG2 479 aa18.32■□□□□ 0.52
SMAD3-213ENST00000560175 FAM182BQ5T319 152 aa18.31■□□□□ 0.52
SMAD3-213ENST00000560175 RGPD1P0DJD0 1748 aa18.3■□□□□ 0.52
SMAD3-213ENST00000560175 PEAK1Q9H792 1746 aa18.3■□□□□ 0.52
SMAD3-213ENST00000560175 PDE3BQ13370 1112 aa18.3■□□□□ 0.52
SMAD3-213ENST00000560175 ANKRD24Q8TF21 1146 aa18.3■□□□□ 0.52
SMAD3-213ENST00000560175 LRRC37A3O60309 1634 aa18.3■□□□□ 0.52
SMAD3-213ENST00000560175 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
SMAD3-213ENST00000560175 FAM208AQ9UK61 1670 aaKnown RBP18.29■□□□□ 0.52
SMAD3-213ENST00000560175 HOXC9P31274 260 aa18.29■□□□□ 0.52
SMAD3-213ENST00000560175 RTL1A6NKG5 1358 aa18.29■□□□□ 0.52
SMAD3-213ENST00000560175 CGNL1Q0VF96 1302 aa18.28■□□□□ 0.52
SMAD3-213ENST00000560175 CSB-PGBD3P0DP91 1061 aa18.28■□□□□ 0.52
SMAD3-213ENST00000560175 BCL9O00512 1426 aa18.28■□□□□ 0.52
SMAD3-213ENST00000560175 TNS1Q9HBL0 1735 aaKnown RBP18.28■□□□□ 0.52
SMAD3-213ENST00000560175 DDB1Q16531 1140 aa18.27■□□□□ 0.52
SMAD3-213ENST00000560175 PANK3Q9H999 370 aa18.27■□□□□ 0.52
SMAD3-213ENST00000560175 SBF2Q86WG5 1849 aa18.26■□□□□ 0.51
SMAD3-213ENST00000560175 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
SMAD3-213ENST00000560175 MAP2P11137 1827 aaKnown RBP18.26■□□□□ 0.51
SMAD3-213ENST00000560175 AMPHP49418 695 aa18.25■□□□□ 0.51
SMAD3-213ENST00000560175 SF3B2Q13435 895 aaKnown RBP18.25■□□□□ 0.51
SMAD3-213ENST00000560175 RRS1Q15050 365 aaKnown RBP18.25■□□□□ 0.51
SMAD3-213ENST00000560175 DEFB132Q7Z7B7 95 aa18.25■□□□□ 0.51
SMAD3-213ENST00000560175 KIF7Q2M1P5 1343 aa18.24■□□□□ 0.51
SMAD3-213ENST00000560175 NLRP2Q9NX02 1062 aa18.24■□□□□ 0.51
SMAD3-213ENST00000560175 RGPD2P0DJD1 1756 aa18.23■□□□□ 0.51
SMAD3-213ENST00000560175 INSRP06213 1382 aa18.23■□□□□ 0.51
SMAD3-213ENST00000560175 EXOC5O00471 708 aa18.23■□□□□ 0.51
SMAD3-213ENST00000560175 MARCH10Q8NA82 808 aaPredicted RBP18.23■□□□□ 0.51
SMAD3-213ENST00000560175 POLR3GLQ9BT43 218 aa18.23■□□□□ 0.51
SMAD3-213ENST00000560175 OVOS2A0A0G2JMS6 1433 aa18.23■□□□□ 0.51
SMAD3-213ENST00000560175 TRIM37O94972 964 aa18.22■□□□□ 0.51
SMAD3-213ENST00000560175 BAG6P46379 1132 aa18.22■□□□□ 0.51
SMAD3-213ENST00000560175 FLT4P35916 1363 aa18.21■□□□□ 0.51
SMAD3-213ENST00000560175 IL2RBP14784 551 aa18.21■□□□□ 0.51
SMAD3-213ENST00000560175 NSD2O96028 1365 aa18.2■□□□□ 0.5
SMAD3-213ENST00000560175 HSP90AB2PQ58FF8 381 aa18.2■□□□□ 0.5
SMAD3-213ENST00000560175 CAMKK2Q96RR4 588 aa18.2■□□□□ 0.5
SMAD3-213ENST00000560175 TNS2Q63HR2 1409 aa18.2■□□□□ 0.5
SMAD3-213ENST00000560175 PER1O15534 1290 aaPredicted RBP18.19■□□□□ 0.5
SMAD3-213ENST00000560175 POLKQ9UBT6 870 aa18.19■□□□□ 0.5
SMAD3-213ENST00000560175 WASHC2AQ641Q2 1341 aa18.19■□□□□ 0.5
SMAD3-213ENST00000560175 EN1Q05925 392 aaPredicted RBP18.18■□□□□ 0.5
SMAD3-213ENST00000560175 NBPF6Q5VWK0 638 aa18.18■□□□□ 0.5
SMAD3-213ENST00000560175 LTV1Q96GA3 475 aaPredicted RBP18.18■□□□□ 0.5
SMAD3-213ENST00000560175 NBPF4Q96M43 638 aa18.18■□□□□ 0.5
SMAD3-213ENST00000560175 EMILIN1Q9Y6C2 1016 aa18.18■□□□□ 0.5
SMAD3-213ENST00000560175 PARD3Q8TEW0 1356 aa18.17■□□□□ 0.5
SMAD3-213ENST00000560175 NCAPD2Q15021 1401 aa18.16■□□□□ 0.5
SMAD3-213ENST00000560175 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
SMAD3-213ENST00000560175 BCL11BQ9C0K0 894 aaPredicted RBP18.16■□□□□ 0.5
SMAD3-213ENST00000560175 PLSCR1O15162 318 aa18.15■□□□□ 0.5
SMAD3-213ENST00000560175 APBA3O96018 575 aa18.15■□□□□ 0.5
SMAD3-213ENST00000560175 KNSTRNQ9Y448 316 aa18.15■□□□□ 0.5
SMAD3-213ENST00000560175 RGPD3A6NKT7 1758 aaPredicted RBP18.14■□□□□ 0.5
SMAD3-213ENST00000560175 RGPD4Q7Z3J3 1758 aa18.14■□□□□ 0.5
SMAD3-213ENST00000560175 EZH2Q15910 746 aaKnown RBP18.14■□□□□ 0.49
SMAD3-213ENST00000560175 RREB1Q92766 1687 aa18.14■□□□□ 0.49
SMAD3-213ENST00000560175 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
SMAD3-213ENST00000560175 SHANK3Q9BYB0 1731 aa18.13■□□□□ 0.49
SMAD3-213ENST00000560175 PTF1AQ7RTS3 328 aa18.12■□□□□ 0.49
SMAD3-213ENST00000560175 MEGF6O75095 1541 aa18.12■□□□□ 0.49
SMAD3-213ENST00000560175 NHSQ6T4R5 1651 aa18.1■□□□□ 0.49
SMAD3-213ENST00000560175 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
SMAD3-213ENST00000560175 ZCRB1Q8TBF4 217 aaKnown RBP18.1■□□□□ 0.49
SMAD3-213ENST00000560175 MORC1Q86VD1 984 aa18.09■□□□□ 0.49
SMAD3-213ENST00000560175 SRCAPQ6ZRS2 3230 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms