RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 MON2Q7Z3U7 1717 aa16.01■□□□□ 0.15
HERC1-204ENST00000559715 OVOS2A0A0G2JMS6 1433 aa16.01■□□□□ 0.15
HERC1-204ENST00000559715 OVOS2A0A0J9YW53 1432 aa16.01■□□□□ 0.15
HERC1-204ENST00000559715 OVOS2Q6IE36 1432 aa16.01■□□□□ 0.15
HERC1-204ENST00000559715 CASZ1Q86V15 1759 aa16■□□□□ 0.15
HERC1-204ENST00000559715 EVC2Q86UK5 1308 aa16■□□□□ 0.15
HERC1-204ENST00000559715 WDR17Q8IZU2 1322 aa16■□□□□ 0.15
HERC1-204ENST00000559715 USP54Q70EL1 1684 aa16■□□□□ 0.15
HERC1-204ENST00000559715 MARCH10Q8NA82 808 aaPredicted RBP16■□□□□ 0.15
HERC1-204ENST00000559715 BCL9O00512 1426 aa16■□□□□ 0.15
HERC1-204ENST00000559715 CD163L1Q9NR16 1453 aa15.99■□□□□ 0.15
HERC1-204ENST00000559715 PLSCR1O15162 318 aa15.99■□□□□ 0.15
HERC1-204ENST00000559715 DDB1Q16531 1140 aa15.97■□□□□ 0.15
HERC1-204ENST00000559715 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
HERC1-204ENST00000559715 ANO8Q9HCE9 1232 aaPredicted RBP15.97■□□□□ 0.15
HERC1-204ENST00000559715 C11orf95C9JLR9 678 aaPredicted RBP15.96■□□□□ 0.15
HERC1-204ENST00000559715 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.15
HERC1-204ENST00000559715 CARD10Q9BWT7 1032 aa15.96■□□□□ 0.15
HERC1-204ENST00000559715 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.15
HERC1-204ENST00000559715 PDGFDQ9GZP0 370 aaPredicted RBP15.96■□□□□ 0.15
HERC1-204ENST00000559715 SBNO2Q9Y2G9 1366 aa15.96■□□□□ 0.15
HERC1-204ENST00000559715 TTC21AQ8NDW8 1320 aa15.95■□□□□ 0.14
HERC1-204ENST00000559715 ZBTB7CA1YPR0 619 aa15.95■□□□□ 0.14
HERC1-204ENST00000559715 ROCK2O75116 1388 aaKnown RBP15.95■□□□□ 0.14
HERC1-204ENST00000559715 ABCC6O95255 1503 aa15.94■□□□□ 0.14
HERC1-204ENST00000559715 NBPF14Q5TI25 921 aa15.94■□□□□ 0.14
HERC1-204ENST00000559715 USP31Q70CQ4 1352 aa15.94■□□□□ 0.14
HERC1-204ENST00000559715 LTN1O94822 1766 aa15.94■□□□□ 0.14
HERC1-204ENST00000559715 GOLGB1Q14789 3259 aaKnown RBP15.93■□□□□ 0.14
HERC1-204ENST00000559715 KCNH5Q8NCM2 988 aa15.93■□□□□ 0.14
HERC1-204ENST00000559715 KTN1Q86UP2 1357 aaKnown RBP15.92■□□□□ 0.14
HERC1-204ENST00000559715 KCNQ2O43526 872 aa15.92■□□□□ 0.14
HERC1-204ENST00000559715 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
HERC1-204ENST00000559715 CDCA7Q9BWT1 371 aaPredicted RBP15.92■□□□□ 0.14
HERC1-204ENST00000559715 SPON1Q9HCB6 807 aa15.91■□□□□ 0.14
HERC1-204ENST00000559715 NHSQ6T4R5 1651 aa15.9■□□□□ 0.14
HERC1-204ENST00000559715 SOX12O15370 315 aa15.9■□□□□ 0.14
HERC1-204ENST00000559715 TNS2Q63HR2 1409 aa15.88■□□□□ 0.13
HERC1-204ENST00000559715 PAPPAQ13219 1627 aa15.88■□□□□ 0.13
HERC1-204ENST00000559715 PTGER2P43116 358 aa15.88■□□□□ 0.13
HERC1-204ENST00000559715 NME9Q86XW9 330 aa15.88■□□□□ 0.13
HERC1-204ENST00000559715 ERBB3P21860 1342 aa15.88■□□□□ 0.13
HERC1-204ENST00000559715 CCDC7Q96M83 1385 aa15.87■□□□□ 0.13
HERC1-204ENST00000559715 MYOM1P52179 1685 aa15.87■□□□□ 0.13
HERC1-204ENST00000559715 TXNRD1Q16881 649 aa15.87■□□□□ 0.13
HERC1-204ENST00000559715 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
HERC1-204ENST00000559715 SLC12A5Q9H2X9 1139 aa15.87■□□□□ 0.13
HERC1-204ENST00000559715 NINLQ9Y2I6 1382 aa15.87■□□□□ 0.13
HERC1-204ENST00000559715 EXOC5O00471 708 aa15.86■□□□□ 0.13
HERC1-204ENST00000559715 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.86■□□□□ 0.13
HERC1-204ENST00000559715 BTAF1O14981 1849 aa15.86■□□□□ 0.13
HERC1-204ENST00000559715 KAT6BQ8WYB5 2073 aa15.85■□□□□ 0.13
HERC1-204ENST00000559715 CSB-PGBD3P0DP91 1061 aa15.84■□□□□ 0.13
HERC1-204ENST00000559715 SGIP1Q9BQI5 828 aa15.84■□□□□ 0.13
HERC1-204ENST00000559715 A0A1W2PP64 1363 aa15.84■□□□□ 0.13
HERC1-204ENST00000559715 SLC15A2Q16348 729 aa15.83■□□□□ 0.12
HERC1-204ENST00000559715 TESK2Q96S53 571 aa15.83■□□□□ 0.12
HERC1-204ENST00000559715 EDC4Q6P2E9 1401 aaKnown RBP15.83■□□□□ 0.12
HERC1-204ENST00000559715 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
HERC1-204ENST00000559715 ZBTB7AO95365 584 aa15.82■□□□□ 0.12
HERC1-204ENST00000559715 PUS7Q96PZ0 661 aaKnown RBP15.82■□□□□ 0.12
HERC1-204ENST00000559715 CARD11Q9BXL7 1154 aa15.82■□□□□ 0.12
HERC1-204ENST00000559715 SHANK3Q9BYB0 1731 aa15.81■□□□□ 0.12
HERC1-204ENST00000559715 COL24A1Q17RW2 1714 aa15.8■□□□□ 0.12
HERC1-204ENST00000559715 FAM208AQ9UK61 1670 aaKnown RBP15.8■□□□□ 0.12
HERC1-204ENST00000559715 YY1P25490 414 aa15.8■□□□□ 0.12
HERC1-204ENST00000559715 ANKRD24Q8TF21 1146 aa15.8■□□□□ 0.12
HERC1-204ENST00000559715 ACSBG1Q96GR2 724 aa15.8■□□□□ 0.12
HERC1-204ENST00000559715 IL2RBP14784 551 aa15.79■□□□□ 0.12
HERC1-204ENST00000559715 LRRC4BQ9NT99 713 aa15.79■□□□□ 0.12
HERC1-204ENST00000559715 NLRP2Q9NX02 1062 aa15.79■□□□□ 0.12
HERC1-204ENST00000559715 PPP1R1BQ9UD71 204 aaPredicted RBP15.79■□□□□ 0.12
HERC1-204ENST00000559715 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
HERC1-204ENST00000559715 FBLN1P23142 703 aa15.78■□□□□ 0.12
HERC1-204ENST00000559715 TMC1Q8TDI8 760 aa15.78■□□□□ 0.12
HERC1-204ENST00000559715 IP6K1Q92551 441 aa15.78■□□□□ 0.12
HERC1-204ENST00000559715 TUBGCP6Q96RT7 1819 aa15.78■□□□□ 0.12
HERC1-204ENST00000559715 QSER1Q2KHR3 1735 aa15.77■□□□□ 0.12
HERC1-204ENST00000559715 ZNF827Q17R98 1081 aa15.76■□□□□ 0.11
HERC1-204ENST00000559715 HDGFL2Q7Z4V5 671 aaPredicted RBP15.76■□□□□ 0.11
HERC1-204ENST00000559715 STK32BQ9NY57 414 aa15.76■□□□□ 0.11
HERC1-204ENST00000559715 LY75O60449 1722 aa15.76■□□□□ 0.11
HERC1-204ENST00000559715 SYT17Q9BSW7 474 aa15.75■□□□□ 0.11
HERC1-204ENST00000559715 MTFR1LQ9H019 292 aa15.75■□□□□ 0.11
HERC1-204ENST00000559715 TERF2IPQ9NYB0 399 aa15.75■□□□□ 0.11
HERC1-204ENST00000559715 CHD4Q14839 1912 aa15.74■□□□□ 0.11
HERC1-204ENST00000559715 ST20-MTHFSA0A0A6YYL1 179 aa15.74■□□□□ 0.11
HERC1-204ENST00000559715 FHDC1Q9C0D6 1143 aaPredicted RBP15.74■□□□□ 0.11
HERC1-204ENST00000559715 NSD2O96028 1365 aa15.74■□□□□ 0.11
HERC1-204ENST00000559715 MAP3K19Q56UN5 1328 aa15.73■□□□□ 0.11
HERC1-204ENST00000559715 AKT1S1Q96B36 256 aa15.73■□□□□ 0.11
HERC1-204ENST00000559715 DOT1LQ8TEK3 1739 aa15.73■□□□□ 0.11
HERC1-204ENST00000559715 HOXC9P31274 260 aa15.71■□□□□ 0.11
HERC1-204ENST00000559715 MEGF6O75095 1541 aa15.71■□□□□ 0.11
HERC1-204ENST00000559715 TONSLQ96HA7 1378 aa15.71■□□□□ 0.11
HERC1-204ENST00000559715 MAP3K5Q99683 1374 aa15.71■□□□□ 0.11
HERC1-204ENST00000559715 CEP350Q5VT06 3117 aa15.7■□□□□ 0.1
HERC1-204ENST00000559715 KCNQ4P56696 695 aa15.69■□□□□ 0.1
HERC1-204ENST00000559715 DDX54Q8TDD1 881 aaKnown RBP15.69■□□□□ 0.1
HERC1-204ENST00000559715 LTV1Q96GA3 475 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms