RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 PLEKHG5O94827 1062 aa18.97■□□□□ 0.63
RABGGTA-209ENST00000559551 ZNF521Q96K83 1311 aa18.97■□□□□ 0.63
RABGGTA-209ENST00000559551 GCP02774 474 aa18.96■□□□□ 0.63
RABGGTA-209ENST00000559551 RUNDC1Q96C34 613 aa18.96■□□□□ 0.63
RABGGTA-209ENST00000559551 ABCA3Q99758 1704 aa18.96■□□□□ 0.63
RABGGTA-209ENST00000559551 HOXC9P31274 260 aa18.96■□□□□ 0.63
RABGGTA-209ENST00000559551 RSPH6AQ9H0K4 717 aa18.96■□□□□ 0.63
RABGGTA-209ENST00000559551 COL18A1P39060 1754 aa18.95■□□□□ 0.62
RABGGTA-209ENST00000559551 KIF24Q5T7B8 1368 aa18.94■□□□□ 0.62
RABGGTA-209ENST00000559551 DLG5Q8TDM6 1919 aa18.94■□□□□ 0.62
RABGGTA-209ENST00000559551 HMOX1P09601 288 aa18.94■□□□□ 0.62
RABGGTA-209ENST00000559551 TCP11L2Q8N4U5 519 aa18.94■□□□□ 0.62
RABGGTA-209ENST00000559551 AMPHP49418 695 aa18.93■□□□□ 0.62
RABGGTA-209ENST00000559551 ARHGEF25Q86VW2 580 aa18.93■□□□□ 0.62
RABGGTA-209ENST00000559551 KCNH5Q8NCM2 988 aa18.93■□□□□ 0.62
RABGGTA-209ENST00000559551 CABLES1Q8TDN4 633 aa18.93■□□□□ 0.62
RABGGTA-209ENST00000559551 CDCA7LQ96GN5 454 aa18.93■□□□□ 0.62
RABGGTA-209ENST00000559551 RRP7AQ9Y3A4 280 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-209ENST00000559551 RTL1A6NKG5 1358 aa18.92■□□□□ 0.62
RABGGTA-209ENST00000559551 AEBP1Q8IUX7 1158 aa18.92■□□□□ 0.62
RABGGTA-209ENST00000559551 AHDC1Q5TGY3 1603 aaPredicted RBP18.92■□□□□ 0.62
RABGGTA-209ENST00000559551 FCHSD2O94868 740 aa18.91■□□□□ 0.62
RABGGTA-209ENST00000559551 PHF23Q9BUL5 403 aaPredicted RBP18.91■□□□□ 0.62
RABGGTA-209ENST00000559551 PRKAR2BP31323 418 aa18.9■□□□□ 0.62
RABGGTA-209ENST00000559551 IP6K1Q92551 441 aa18.9■□□□□ 0.62
RABGGTA-209ENST00000559551 ARHGEF10O15013 1369 aa18.9■□□□□ 0.62
RABGGTA-209ENST00000559551 PHACTR3Q96KR7 559 aa18.89■□□□□ 0.62
RABGGTA-209ENST00000559551 EYA1Q99502 592 aa18.88■□□□□ 0.61
RABGGTA-209ENST00000559551 NEUROD2Q15784 382 aa18.88■□□□□ 0.61
RABGGTA-209ENST00000559551 SPINK5Q9NQ38 1064 aaPredicted RBP18.88■□□□□ 0.61
RABGGTA-209ENST00000559551 AXIN2Q9Y2T1 843 aa18.88■□□□□ 0.61
RABGGTA-209ENST00000559551 IGSF1Q8N6C5 1336 aa18.87■□□□□ 0.61
RABGGTA-209ENST00000559551 ZC3H6P61129 1189 aaKnown RBP18.87■□□□□ 0.61
RABGGTA-209ENST00000559551 ZBTB7CA1YPR0 619 aa18.86■□□□□ 0.61
RABGGTA-209ENST00000559551 TMPOP42166 694 aaKnown RBP18.86■□□□□ 0.61
RABGGTA-209ENST00000559551 SULT6B1Q6IMI4 303 aa18.86■□□□□ 0.61
RABGGTA-209ENST00000559551 WWC1Q8IX03 1113 aa18.86■□□□□ 0.61
RABGGTA-209ENST00000559551 KDRP35968 1356 aa18.86■□□□□ 0.61
RABGGTA-209ENST00000559551 COL16A1Q07092 1604 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-209ENST00000559551 CAMTA1Q9Y6Y1 1673 aa18.85■□□□□ 0.61
RABGGTA-209ENST00000559551 PHLPP1O60346 1717 aa18.85■□□□□ 0.61
RABGGTA-209ENST00000559551 PDE3BQ13370 1112 aa18.85■□□□□ 0.61
RABGGTA-209ENST00000559551 LTV1Q96GA3 475 aaPredicted RBP18.85■□□□□ 0.61
RABGGTA-209ENST00000559551 TRIM35Q9UPQ4 493 aa18.85■□□□□ 0.61
RABGGTA-209ENST00000559551 LMO7Q8WWI1 1683 aa18.83■□□□□ 0.61
RABGGTA-209ENST00000559551 CCDC27Q2M243 656 aa18.83■□□□□ 0.6
RABGGTA-209ENST00000559551 NGEFQ8N5V2 710 aa18.83■□□□□ 0.6
RABGGTA-209ENST00000559551 COL22A1Q8NFW1 1626 aaPredicted RBP18.83■□□□□ 0.6
RABGGTA-209ENST00000559551 MAPK8IP3Q9UPT6 1336 aa18.83■□□□□ 0.6
RABGGTA-209ENST00000559551 NCBP3Q53F19 620 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-209ENST00000559551 CPDO75976 1380 aa18.82■□□□□ 0.6
RABGGTA-209ENST00000559551 KIAA0232Q92628 1395 aa18.82■□□□□ 0.6
RABGGTA-209ENST00000559551 NBPF6Q5VWK0 638 aa18.81■□□□□ 0.6
RABGGTA-209ENST00000559551 TRMT2AQ8IZ69 625 aaKnown RBP18.81■□□□□ 0.6
RABGGTA-209ENST00000559551 NBPF4Q96M43 638 aa18.81■□□□□ 0.6
RABGGTA-209ENST00000559551 GOLGA2Q08379 1002 aa18.81■□□□□ 0.6
RABGGTA-209ENST00000559551 SLFN5Q08AF3 891 aa18.81■□□□□ 0.6
RABGGTA-209ENST00000559551 DUSP27Q5VZP5 1158 aa18.81■□□□□ 0.6
RABGGTA-209ENST00000559551 LRRC59Q96AG4 307 aaKnown RBP18.81■□□□□ 0.6
RABGGTA-209ENST00000559551 ABCC6O95255 1503 aa18.8■□□□□ 0.6
RABGGTA-209ENST00000559551 NCAPD2Q15021 1401 aa18.8■□□□□ 0.6
RABGGTA-209ENST00000559551 CHRNA2Q15822 529 aa18.8■□□□□ 0.6
RABGGTA-209ENST00000559551 USHBP1Q8N6Y0 703 aa18.8■□□□□ 0.6
RABGGTA-209ENST00000559551 PNNQ9H307 717 aaKnown RBP18.8■□□□□ 0.6
RABGGTA-209ENST00000559551 RIPK4P57078 832 aa18.79■□□□□ 0.6
RABGGTA-209ENST00000559551 NFE2L2Q16236 605 aa18.79■□□□□ 0.6
RABGGTA-209ENST00000559551 FAM208AQ9UK61 1670 aaKnown RBP18.79■□□□□ 0.6
RABGGTA-209ENST00000559551 TOM1O60784 492 aa18.78■□□□□ 0.6
RABGGTA-209ENST00000559551 ANKRD24Q8TF21 1146 aa18.78■□□□□ 0.6
RABGGTA-209ENST00000559551 PIP4K2BP78356 416 aa18.78■□□□□ 0.6
RABGGTA-209ENST00000559551 ERBB3P21860 1342 aa18.77■□□□□ 0.6
RABGGTA-209ENST00000559551 SUPT16HQ9Y5B9 1047 aaKnown RBP18.77■□□□□ 0.6
RABGGTA-209ENST00000559551 UBAP1LF5GYI3 381 aa18.77■□□□□ 0.59
RABGGTA-209ENST00000559551 WDR63Q8IWG1 891 aa18.76■□□□□ 0.59
RABGGTA-209ENST00000559551 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-209ENST00000559551 THUMPD2Q9BTF0 503 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-209ENST00000559551 VIRMAQ69YN4 1812 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-209ENST00000559551 FAM83GA6ND36 823 aa18.73■□□□□ 0.59
RABGGTA-209ENST00000559551 E9PSI1 815 aa18.73■□□□□ 0.59
RABGGTA-209ENST00000559551 NEFMP07197 916 aa18.72■□□□□ 0.59
RABGGTA-209ENST00000559551 PRDM11Q9NQV5 511 aa18.71■□□□□ 0.59
RABGGTA-209ENST00000559551 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-209ENST00000559551 DCTN1Q14203 1278 aa18.7■□□□□ 0.58
RABGGTA-209ENST00000559551 RNF123Q5XPI4 1314 aa18.7■□□□□ 0.58
RABGGTA-209ENST00000559551 LRRC37A3O60309 1634 aa18.69■□□□□ 0.58
RABGGTA-209ENST00000559551 COL14A1Q05707 1796 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-209ENST00000559551 HAP1P54257 671 aaPredicted RBP18.68■□□□□ 0.58
RABGGTA-209ENST00000559551 TSR2Q969E8 191 aaKnown RBP18.67■□□□□ 0.58
RABGGTA-209ENST00000559551 RCAN3Q9UKA8 241 aa18.67■□□□□ 0.58
RABGGTA-209ENST00000559551 IL16Q14005 1332 aa18.67■□□□□ 0.58
RABGGTA-209ENST00000559551 FANCIQ9NVI1 1328 aa18.67■□□□□ 0.58
RABGGTA-209ENST00000559551 PLCH1Q4KWH8 1693 aa18.66■□□□□ 0.58
RABGGTA-209ENST00000559551 MEGF6O75095 1541 aa18.66■□□□□ 0.58
RABGGTA-209ENST00000559551 MCM10Q7L590 875 aa18.65■□□□□ 0.58
RABGGTA-209ENST00000559551 NLRP2Q9NX02 1062 aa18.65■□□□□ 0.58
RABGGTA-209ENST00000559551 ZNF853P0CG23 659 aa18.65■□□□□ 0.58
RABGGTA-209ENST00000559551 PKD1L3Q7Z443 1732 aa18.64■□□□□ 0.58
RABGGTA-209ENST00000559551 CRB1P82279 1406 aa18.64■□□□□ 0.57
RABGGTA-209ENST00000559551 WDR17Q8IZU2 1322 aa18.64■□□□□ 0.57
RABGGTA-209ENST00000559551 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms