RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 ZNF622Q969S3 477 aaKnown RBP eCLIP7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 IFT172Q9UG01 1749 aa7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 ANKRD33BA6NCL7 494 aa7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 TCEAL1Q15170 157 aa7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 FBXO31Q5XUX0 539 aaPredicted RBP7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 EGFLAMQ63HQ2 1017 aa7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 PCGF6Q9BYE7 350 aa7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 MIA2Q96PC5 1412 aa7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 HOXA2O43364 376 aa7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 HSP90AA2PQ14568 343 aaPredicted RBP7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 HSP90AB2PQ58FF8 381 aa7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 WWC3Q9ULE0 1092 aa7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 CARMIL2Q6F5E8 1435 aa7.4□□□□□ -1.22
CTDSPL2-206ENST00000559175 PHF14O94880 888 aa7.4□□□□□ -1.22
CTDSPL2-206ENST00000559175 ARMCX6Q7L4S7 300 aa7.4□□□□□ -1.22
CTDSPL2-206ENST00000559175 ZSWIM4Q9H7M6 989 aa7.4□□□□□ -1.22
CTDSPL2-206ENST00000559175 BIN2Q9UBW5 565 aaPredicted RBP7.4□□□□□ -1.22
CTDSPL2-206ENST00000559175 DMGDHQ9UI17 866 aaKnown RBP7.4□□□□□ -1.22
CTDSPL2-206ENST00000559175 LMTK3Q96Q04 1460 aa7.4□□□□□ -1.22
CTDSPL2-206ENST00000559175 MLH3Q9UHC1 1453 aa7.4□□□□□ -1.22
CTDSPL2-206ENST00000559175 MYBPC2Q14324 1141 aa7.4□□□□□ -1.22
CTDSPL2-206ENST00000559175 PRAG1Q86YV5 1406 aa7.4□□□□□ -1.23
CTDSPL2-206ENST00000559175 MINK1Q8N4C8 1332 aaPredicted RBP7.4□□□□□ -1.23
CTDSPL2-206ENST00000559175 ARID4AP29374 1257 aaPredicted RBP7.4□□□□□ -1.23
CTDSPL2-206ENST00000559175 SERPINB4P48594 390 aa7.4□□□□□ -1.23
CTDSPL2-206ENST00000559175 MAP2K5Q13163 448 aa7.4□□□□□ -1.23
CTDSPL2-206ENST00000559175 BIRC2Q13490 618 aa7.4□□□□□ -1.23
CTDSPL2-206ENST00000559175 SH3D19Q5HYK7 790 aa7.4□□□□□ -1.23
CTDSPL2-206ENST00000559175 OXER1Q8TDS5 423 aa7.4□□□□□ -1.23
CTDSPL2-206ENST00000559175 KCNB2Q92953 911 aa7.4□□□□□ -1.23
CTDSPL2-206ENST00000559175 MFRPQ9BY79 579 aa7.4□□□□□ -1.23
CTDSPL2-206ENST00000559175 SRPK2P78362 688 aaKnown RBP7.39□□□□□ -1.23
CTDSPL2-206ENST00000559175 HDAC5Q9UQL6 1122 aa7.39□□□□□ -1.23
CTDSPL2-206ENST00000559175 TLDC2A0PJX2 215 aa7.39□□□□□ -1.23
CTDSPL2-206ENST00000559175 EPB41L2O43491 1005 aaKnown RBP7.39□□□□□ -1.23
CTDSPL2-206ENST00000559175 IBSPP21815 317 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-206ENST00000559175 ENOX2Q16206 610 aaKnown RBP7.39□□□□□ -1.23
CTDSPL2-206ENST00000559175 PRDM15P57071 1507 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL2-206ENST00000559175 RIMS1Q86UR5 1692 aaKnown RBP7.39□□□□□ -1.23
CTDSPL2-206ENST00000559175 ANP32CO43423 234 aa7.39□□□□□ -1.23
CTDSPL2-206ENST00000559175 MARSP56192 900 aaKnown RBP7.39□□□□□ -1.23
CTDSPL2-206ENST00000559175 ZFYVE16Q7Z3T8 1539 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 RRP9O43818 475 aaKnown RBP7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 SSFA2P28290 1259 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 NUBP1P53384 320 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 RHBDL3P58872 404 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 MTMR14Q8NCE2 650 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 RPS6KC1Q96S38 1066 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 GNL3LQ9NVN8 582 aaKnown RBP7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 KIAA1107Q9UPP5 1409 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 HMGB1P1B2RPK0 211 aaPredicted RBP7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 ZNF500O60304 480 aaPredicted RBP7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 CLEC4GQ6UXB4 293 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 GET4Q7L5D6 327 aaPredicted RBP7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 MADDQ8WXG6 1647 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 IQSEC2Q5JU85 1478 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 CCDC184Q52MB2 194 aa7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 MAGEC2Q9UBF1 373 aaPredicted RBP7.38□□□□□ -1.23
CTDSPL2-206ENST00000559175 SETD1AO15047 1707 aaKnown RBP7.37□□□□□ -1.23
CTDSPL2-206ENST00000559175 STK10O94804 968 aaKnown RBP7.37□□□□□ -1.23
CTDSPL2-206ENST00000559175 IRX3P78415 501 aaPredicted RBP7.37□□□□□ -1.23
CTDSPL2-206ENST00000559175 PRKAG2Q9UGJ0 569 aa7.37□□□□□ -1.23
CTDSPL2-206ENST00000559175 ERBB3P21860 1342 aa7.37□□□□□ -1.23
CTDSPL2-206ENST00000559175 NPAS4Q8IUM7 802 aa7.37□□□□□ -1.23
CTDSPL2-206ENST00000559175 BACH2Q9BYV9 841 aa7.37□□□□□ -1.23
CTDSPL2-206ENST00000559175 MAF1Q9H063 256 aa7.37□□□□□ -1.23
CTDSPL2-206ENST00000559175 C3P01024 1663 aa7.36□□□□□ -1.23
CTDSPL2-206ENST00000559175 FMNL3Q8IVF7 1028 aa7.36□□□□□ -1.23
CTDSPL2-206ENST00000559175 GNEQ9Y223 722 aaKnown RBP7.36□□□□□ -1.23
CTDSPL2-206ENST00000559175 BDNFP23560 247 aa7.36□□□□□ -1.23
CTDSPL2-206ENST00000559175 NOP9Q86U38 636 aaKnown RBP7.36□□□□□ -1.23
CTDSPL2-206ENST00000559175 BMS1Q14692 1282 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 MAMSTRQ6ZN01 415 aa7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 PPP1R12CQ9BZL4 782 aa7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 ZNF518AQ6AHZ1 1483 aa7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 TBX4P57082 545 aa7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 MRPL42Q9Y6G3 142 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 RTEL1-TNFRSF6BF6WH68 1400 aa7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 JAZF1Q86VZ6 243 aa7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 MPHOSPH6Q99547 160 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 NOP58Q9Y2X3 529 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 COL4A3BPQ9Y5P4 624 aa7.35□□□□□ -1.23
CTDSPL2-206ENST00000559175 PALM3A6NDB9 673 aaPredicted RBP7.34□□□□□ -1.23
CTDSPL2-206ENST00000559175 DHX16O60231 1041 aaKnown RBP7.34□□□□□ -1.23
CTDSPL2-206ENST00000559175 DNAJA1P31689 397 aaKnown RBP7.34□□□□□ -1.23
CTDSPL2-206ENST00000559175 USP5P45974 858 aa7.34□□□□□ -1.23
CTDSPL2-206ENST00000559175 TBX22Q9Y458 520 aa7.34□□□□□ -1.23
CTDSPL2-206ENST00000559175 EVA1CP58658 441 aa7.34□□□□□ -1.23
CTDSPL2-206ENST00000559175 JDP2Q8WYK2 163 aa7.34□□□□□ -1.23
CTDSPL2-206ENST00000559175 ASXL2Q76L83 1435 aa7.34□□□□□ -1.24
CTDSPL2-206ENST00000559175 RFC5P40937 340 aa7.33□□□□□ -1.24
CTDSPL2-206ENST00000559175 RGS3P49796 1198 aa7.33□□□□□ -1.24
CTDSPL2-206ENST00000559175 FILIP1Q7Z7B0 1213 aa7.33□□□□□ -1.24
CTDSPL2-206ENST00000559175 PIK3R5Q8WYR1 880 aa7.33□□□□□ -1.24
CTDSPL2-206ENST00000559175 IRF2BPLQ9H1B7 796 aa7.33□□□□□ -1.24
CTDSPL2-206ENST00000559175 S100BP04271 92 aaPredicted RBP7.33□□□□□ -1.24
CTDSPL2-206ENST00000559175 GYS2P54840 703 aa7.33□□□□□ -1.24
CTDSPL2-206ENST00000559175 DDX27Q96GQ7 796 aaKnown RBP7.33□□□□□ -1.24
CTDSPL2-206ENST00000559175 STRCQ7RTU9 1775 aa7.33□□□□□ -1.24
CTDSPL2-206ENST00000559175 TNNI2P48788 182 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms