RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 CDCA8Q53HL2 280 aa30.06■■■□□ 2.4
CRNDE-205ENST00000558952 NFAT5O94916 1531 aa30.06■■■□□ 2.4
CRNDE-205ENST00000558952 TOM1L2Q6ZVM7 507 aa30.05■■■□□ 2.4
CRNDE-205ENST00000558952 USP54Q70EL1 1684 aa30.04■■■□□ 2.4
CRNDE-205ENST00000558952 COL18A1P39060 1754 aa30.03■■■□□ 2.4
CRNDE-205ENST00000558952 PDE3BQ13370 1112 aa30.03■■■□□ 2.4
CRNDE-205ENST00000558952 FAM182BQ5T319 152 aa30.03■■■□□ 2.4
CRNDE-205ENST00000558952 AXIN2Q9Y2T1 843 aa30.03■■■□□ 2.4
CRNDE-205ENST00000558952 WDR17Q8IZU2 1322 aa30.01■■■□□ 2.4
CRNDE-205ENST00000558952 ANKRD36BQ8N2N9 1353 aa30.01■■■□□ 2.39
CRNDE-205ENST00000558952 CSB-PGBD3P0DP91 1061 aa30■■■□□ 2.39
CRNDE-205ENST00000558952 DEFB132Q7Z7B7 95 aa29.99■■■□□ 2.39
CRNDE-205ENST00000558952 ABCC6O95255 1503 aa29.99■■■□□ 2.39
CRNDE-205ENST00000558952 BAG6P46379 1132 aa29.98■■■□□ 2.39
CRNDE-205ENST00000558952 FAM196AQ6ZSG2 479 aa29.98■■■□□ 2.39
CRNDE-205ENST00000558952 OVOS2A0A0J9YW53 1432 aa29.96■■■□□ 2.39
CRNDE-205ENST00000558952 OVOS2Q6IE36 1432 aa29.96■■■□□ 2.39
CRNDE-205ENST00000558952 COG3Q96JB2 828 aa29.95■■■□□ 2.39
CRNDE-205ENST00000558952 RGPD1P0DJD0 1748 aa29.95■■■□□ 2.38
CRNDE-205ENST00000558952 PARP4Q9UKK3 1724 aaKnown RBP29.93■■■□□ 2.38
CRNDE-205ENST00000558952 RGPD5Q99666 1765 aa29.93■■■□□ 2.38
CRNDE-205ENST00000558952 CARD10Q9BWT7 1032 aa29.92■■■□□ 2.38
CRNDE-205ENST00000558952 LTN1O94822 1766 aa29.9■■■□□ 2.38
CRNDE-205ENST00000558952 CDCA7Q9BWT1 371 aaPredicted RBP29.9■■■□□ 2.38
CRNDE-205ENST00000558952 DDB1Q16531 1140 aa29.89■■■□□ 2.38
CRNDE-205ENST00000558952 TRIM37O94972 964 aa29.88■■■□□ 2.37
CRNDE-205ENST00000558952 CCDC7Q96M83 1385 aa29.88■■■□□ 2.37
CRNDE-205ENST00000558952 C11orf95C9JLR9 678 aaPredicted RBP29.87■■■□□ 2.37
CRNDE-205ENST00000558952 EIF4G2P78344 907 aaKnown RBP eCLIP29.87■■■□□ 2.37
CRNDE-205ENST00000558952 ERBB3P21860 1342 aa29.87■■■□□ 2.37
CRNDE-205ENST00000558952 LRRC37A3O60309 1634 aa29.85■■■□□ 2.37
CRNDE-205ENST00000558952 WNK3Q9BYP7 1800 aa29.85■■■□□ 2.37
CRNDE-205ENST00000558952 EN1Q05925 392 aaPredicted RBP29.84■■■□□ 2.37
CRNDE-205ENST00000558952 ANKRD24Q8TF21 1146 aa29.84■■■□□ 2.37
CRNDE-205ENST00000558952 NLRP2Q9NX02 1062 aa29.84■■■□□ 2.37
CRNDE-205ENST00000558952 TNS1Q9HBL0 1735 aaKnown RBP29.84■■■□□ 2.37
CRNDE-205ENST00000558952 OVOS2A0A0G2JMS6 1433 aa29.83■■■□□ 2.37
CRNDE-205ENST00000558952 DISP2A7MBM2 1401 aa29.83■■■□□ 2.37
CRNDE-205ENST00000558952 POLR3GLQ9BT43 218 aa29.82■■■□□ 2.36
CRNDE-205ENST00000558952 MYOM1P52179 1685 aa29.82■■■□□ 2.36
CRNDE-205ENST00000558952 FYB1O15117 783 aa29.81■■■□□ 2.36
CRNDE-205ENST00000558952 IP6K1Q92551 441 aa29.81■■■□□ 2.36
CRNDE-205ENST00000558952 GGNBP2Q9H3C7 697 aa29.81■■■□□ 2.36
CRNDE-205ENST00000558952 APBA3O96018 575 aa29.8■■■□□ 2.36
CRNDE-205ENST00000558952 HSPA5P11021 654 aaKnown RBP29.8■■■□□ 2.36
CRNDE-205ENST00000558952 AMPHP49418 695 aa29.79■■■□□ 2.36
CRNDE-205ENST00000558952 MAP3K19Q56UN5 1328 aa29.78■■■□□ 2.36
CRNDE-205ENST00000558952 EXOC5O00471 708 aa29.78■■■□□ 2.36
CRNDE-205ENST00000558952 KIF20BQ96Q89 1820 aa29.76■■■□□ 2.35
CRNDE-205ENST00000558952 NSD3Q9BZ95 1437 aa29.76■■■□□ 2.35
CRNDE-205ENST00000558952 EZH2Q15910 746 aaKnown RBP29.75■■■□□ 2.35
CRNDE-205ENST00000558952 LTV1Q96GA3 475 aaPredicted RBP29.75■■■□□ 2.35
CRNDE-205ENST00000558952 FBLN1P23142 703 aa29.74■■■□□ 2.35
CRNDE-205ENST00000558952 HOXC9P31274 260 aa29.74■■■□□ 2.35
CRNDE-205ENST00000558952 CARD14Q9BXL6 1004 aa29.74■■■□□ 2.35
CRNDE-205ENST00000558952 PARD3Q8TEW0 1356 aa29.74■■■□□ 2.35
CRNDE-205ENST00000558952 PEAK1Q9H792 1746 aa29.74■■■□□ 2.35
CRNDE-205ENST00000558952 IL2RBP14784 551 aa29.73■■■□□ 2.35
CRNDE-205ENST00000558952 MARCH10Q8NA82 808 aaPredicted RBP29.73■■■□□ 2.35
CRNDE-205ENST00000558952 RTL1A6NKG5 1358 aa29.73■■■□□ 2.35
CRNDE-205ENST00000558952 TNS2Q63HR2 1409 aa29.72■■■□□ 2.35
CRNDE-205ENST00000558952 CAMKK2Q96RR4 588 aa29.72■■■□□ 2.35
CRNDE-205ENST00000558952 FAM208AQ9UK61 1670 aaKnown RBP29.72■■■□□ 2.35
CRNDE-205ENST00000558952 RRS1Q15050 365 aaKnown RBP29.71■■■□□ 2.35
CRNDE-205ENST00000558952 CGNL1Q0VF96 1302 aa29.69■■■□□ 2.34
CRNDE-205ENST00000558952 BCL9O00512 1426 aa29.68■■■□□ 2.34
CRNDE-205ENST00000558952 SMG6Q86US8 1419 aaKnown RBP29.66■■■□□ 2.34
CRNDE-205ENST00000558952 BCL11BQ9C0K0 894 aaPredicted RBP29.66■■■□□ 2.34
CRNDE-205ENST00000558952 PSDA5PKW4 1024 aaPredicted RBP29.65■■■□□ 2.34
CRNDE-205ENST00000558952 SBF2Q86WG5 1849 aa29.63■■■□□ 2.33
CRNDE-205ENST00000558952 FLT4P35916 1363 aa29.62■■■□□ 2.33
CRNDE-205ENST00000558952 KIF24Q5T7B8 1368 aa29.62■■■□□ 2.33
CRNDE-205ENST00000558952 RREB1Q92766 1687 aa29.6■■■□□ 2.33
CRNDE-205ENST00000558952 R3HDM1Q15032 1099 aaKnown RBP29.6■■■□□ 2.33
CRNDE-205ENST00000558952 NBPF14Q5TI25 921 aa29.59■■■□□ 2.33
CRNDE-205ENST00000558952 INSRP06213 1382 aa29.59■■■□□ 2.33
CRNDE-205ENST00000558952 PLSCR1O15162 318 aa29.58■■■□□ 2.33
CRNDE-205ENST00000558952 HSP90AB2PQ58FF8 381 aa29.57■■■□□ 2.32
CRNDE-205ENST00000558952 PANK3Q9H999 370 aa29.57■■■□□ 2.32
CRNDE-205ENST00000558952 PTF1AQ7RTS3 328 aa29.56■■■□□ 2.32
CRNDE-205ENST00000558952 RGPD3A6NKT7 1758 aaPredicted RBP29.56■■■□□ 2.32
CRNDE-205ENST00000558952 RGPD4Q7Z3J3 1758 aa29.56■■■□□ 2.32
CRNDE-205ENST00000558952 NUP188Q5SRE5 1749 aa29.55■■■□□ 2.32
CRNDE-205ENST00000558952 PPM1GO15355 546 aaPredicted RBP29.55■■■□□ 2.32
CRNDE-205ENST00000558952 EMILIN1Q9Y6C2 1016 aa29.55■■■□□ 2.32
CRNDE-205ENST00000558952 NBPF6Q5VWK0 638 aa29.54■■■□□ 2.32
CRNDE-205ENST00000558952 DDX54Q8TDD1 881 aaKnown RBP29.54■■■□□ 2.32
CRNDE-205ENST00000558952 ACSBG1Q96GR2 724 aa29.54■■■□□ 2.32
CRNDE-205ENST00000558952 NBPF4Q96M43 638 aa29.54■■■□□ 2.32
CRNDE-205ENST00000558952 RGPD2P0DJD1 1756 aa29.53■■■□□ 2.32
CRNDE-205ENST00000558952 NHSQ6T4R5 1651 aa29.51■■■□□ 2.31
CRNDE-205ENST00000558952 KCNQ2O43526 872 aa29.51■■■□□ 2.31
CRNDE-205ENST00000558952 USHBP1Q8N6Y0 703 aa29.51■■■□□ 2.31
CRNDE-205ENST00000558952 RAPGEF4Q8WZA2 1011 aa29.51■■■□□ 2.31
CRNDE-205ENST00000558952 ZCRB1Q8TBF4 217 aaKnown RBP29.5■■■□□ 2.31
CRNDE-205ENST00000558952 ANKRD26Q9UPS8 1709 aa29.49■■■□□ 2.31
CRNDE-205ENST00000558952 MEGF6O75095 1541 aa29.49■■■□□ 2.31
CRNDE-205ENST00000558952 TNNT2P45379 298 aaPredicted RBP29.48■■■□□ 2.31
CRNDE-205ENST00000558952 NSD2O96028 1365 aa29.48■■■□□ 2.31
CRNDE-205ENST00000558952 TATP17735 454 aaPredicted RBP29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms