RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 DDB1Q16531 1140 aa15.3■□□□□ 0.04
AP3S2-206ENST00000558806 CDCA7Q9BWT1 371 aaPredicted RBP15.3■□□□□ 0.04
AP3S2-206ENST00000558806 AKAP12Q02952 1782 aa15.29■□□□□ 0.04
AP3S2-206ENST00000558806 PEAK1Q9H792 1746 aa15.29■□□□□ 0.04
AP3S2-206ENST00000558806 ARHGEF25Q86VW2 580 aa15.29■□□□□ 0.04
AP3S2-206ENST00000558806 AXIN2Q9Y2T1 843 aa15.29■□□□□ 0.04
AP3S2-206ENST00000558806 KTN1Q86UP2 1357 aaKnown RBP15.27■□□□□ 0.04
AP3S2-206ENST00000558806 SBNO2Q9Y2G9 1366 aa15.27■□□□□ 0.04
AP3S2-206ENST00000558806 RGPD3A6NKT7 1758 aaPredicted RBP15.27■□□□□ 0.04
AP3S2-206ENST00000558806 RGPD4Q7Z3J3 1758 aa15.27■□□□□ 0.04
AP3S2-206ENST00000558806 PLSCR1O15162 318 aa15.27■□□□□ 0.04
AP3S2-206ENST00000558806 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
AP3S2-206ENST00000558806 CARD10Q9BWT7 1032 aa15.26■□□□□ 0.03
AP3S2-206ENST00000558806 ABCC6O95255 1503 aa15.26■□□□□ 0.03
AP3S2-206ENST00000558806 WNK3Q9BYP7 1800 aa15.26■□□□□ 0.03
AP3S2-206ENST00000558806 BCL9O00512 1426 aa15.26■□□□□ 0.03
AP3S2-206ENST00000558806 SOX12O15370 315 aa15.25■□□□□ 0.03
AP3S2-206ENST00000558806 BCL11BQ9C0K0 894 aaPredicted RBP15.25■□□□□ 0.03
AP3S2-206ENST00000558806 NFAT5O94916 1531 aa15.25■□□□□ 0.03
AP3S2-206ENST00000558806 SBF2Q86WG5 1849 aa15.24■□□□□ 0.03
AP3S2-206ENST00000558806 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
AP3S2-206ENST00000558806 MON2Q7Z3U7 1717 aa15.23■□□□□ 0.03
AP3S2-206ENST00000558806 MARCH10Q8NA82 808 aaPredicted RBP15.23■□□□□ 0.03
AP3S2-206ENST00000558806 CARD11Q9BXL7 1154 aa15.23■□□□□ 0.03
AP3S2-206ENST00000558806 SPON1Q9HCB6 807 aa15.23■□□□□ 0.03
AP3S2-206ENST00000558806 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
AP3S2-206ENST00000558806 RGPD5Q99666 1765 aa15.21■□□□□ 0.03
AP3S2-206ENST00000558806 EXOC5O00471 708 aa15.21■□□□□ 0.03
AP3S2-206ENST00000558806 KCNQ2O43526 872 aa15.21■□□□□ 0.03
AP3S2-206ENST00000558806 PPP1R1BQ9UD71 204 aaPredicted RBP15.21■□□□□ 0.03
AP3S2-206ENST00000558806 USP54Q70EL1 1684 aa15.2■□□□□ 0.02
AP3S2-206ENST00000558806 HDGFL2Q7Z4V5 671 aaPredicted RBP15.2■□□□□ 0.02
AP3S2-206ENST00000558806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.2■□□□□ 0.028e-7■■□□□ 13.6
AP3S2-206ENST00000558806 TNS2Q63HR2 1409 aa15.19■□□□□ 0.02
AP3S2-206ENST00000558806 PTF1AQ7RTS3 328 aa15.19■□□□□ 0.02
AP3S2-206ENST00000558806 TMC1Q8TDI8 760 aa15.19■□□□□ 0.02
AP3S2-206ENST00000558806 CD163L1Q9NR16 1453 aa15.19■□□□□ 0.02
AP3S2-206ENST00000558806 ERBB3P21860 1342 aa15.18■□□□□ 0.02
AP3S2-206ENST00000558806 NME9Q86XW9 330 aa15.18■□□□□ 0.02
AP3S2-206ENST00000558806 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
AP3S2-206ENST00000558806 EDC4Q6P2E9 1401 aaKnown RBP15.17■□□□□ 0.02
AP3S2-206ENST00000558806 NINLQ9Y2I6 1382 aa15.17■□□□□ 0.02
AP3S2-206ENST00000558806 PROM2Q8N271 834 aa15.17■□□□□ 0.02
AP3S2-206ENST00000558806 PUS7Q96PZ0 661 aaKnown RBP15.17■□□□□ 0.02
AP3S2-206ENST00000558806 ANO8Q9HCE9 1232 aaPredicted RBP15.17■□□□□ 0.02
AP3S2-206ENST00000558806 TERF2IPQ9NYB0 399 aa15.17■□□□□ 0.02
AP3S2-206ENST00000558806 SLC12A5Q9H2X9 1139 aa15.16■□□□□ 0.02
AP3S2-206ENST00000558806 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
AP3S2-206ENST00000558806 TXNRD1Q16881 649 aa15.15■□□□□ 0.02
AP3S2-206ENST00000558806 NLRP2Q9NX02 1062 aa15.15■□□□□ 0.02
AP3S2-206ENST00000558806 LTN1O94822 1766 aa15.15■□□□□ 0.02
AP3S2-206ENST00000558806 CASZ1Q86V15 1759 aa15.15■□□□□ 0.02
AP3S2-206ENST00000558806 A0A1W2PP64 1363 aa15.14■□□□□ 0.01
AP3S2-206ENST00000558806 IL2RBP14784 551 aa15.14■□□□□ 0.01
AP3S2-206ENST00000558806 STK32BQ9NY57 414 aa15.14■□□□□ 0.01
AP3S2-206ENST00000558806 NHSQ6T4R5 1651 aa15.13■□□□□ 0.01
AP3S2-206ENST00000558806 ANKRD24Q8TF21 1146 aa15.13■□□□□ 0.01
AP3S2-206ENST00000558806 SLC24A1O60721 1099 aa15.12■□□□□ 0.01
AP3S2-206ENST00000558806 SLC15A2Q16348 729 aa15.12■□□□□ 0.01
AP3S2-206ENST00000558806 YY1P25490 414 aa15.11■□□□□ 0.01
AP3S2-206ENST00000558806 ACSBG1Q96GR2 724 aa15.11■□□□□ 0.01
AP3S2-206ENST00000558806 PDGFDQ9GZP0 370 aaPredicted RBP15.11■□□□□ 0.01
AP3S2-206ENST00000558806 ZBTB7AO95365 584 aa15.1■□□□□ 0.01
AP3S2-206ENST00000558806 IP6K1Q92551 441 aa15.09■□□□□ 0.01
AP3S2-206ENST00000558806 PTGER2P43116 358 aa15.08■□□□□ 0
AP3S2-206ENST00000558806 COG3Q96JB2 828 aa15.08■□□□□ 0
AP3S2-206ENST00000558806 TESK2Q96S53 571 aa15.08■□□□□ 0
AP3S2-206ENST00000558806 FAM208AQ9UK61 1670 aaKnown RBP15.08■□□□□ 0
AP3S2-206ENST00000558806 ST20-MTHFSA0A0A6YYL1 179 aa15.07■□□□□ 0
AP3S2-206ENST00000558806 MTFR1LQ9H019 292 aa15.07■□□□□ 0
AP3S2-206ENST00000558806 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
AP3S2-206ENST00000558806 MYOM1P52179 1685 aa15.06■□□□□ 0
AP3S2-206ENST00000558806 PAPPAQ13219 1627 aa15.06■□□□□ 0
AP3S2-206ENST00000558806 BTAF1O14981 1849 aa15.06■□□□□ 0
AP3S2-206ENST00000558806 ANKRD36BQ8N2N9 1353 aa15.04■□□□□ -0
AP3S2-206ENST00000558806 MAP3K19Q56UN5 1328 aa15.04■□□□□ -0
AP3S2-206ENST00000558806 HOXC9P31274 260 aa15.04■□□□□ -0
AP3S2-206ENST00000558806 LTV1Q96GA3 475 aaPredicted RBP15.04■□□□□ -0
AP3S2-206ENST00000558806 AMPHP49418 695 aa15.03■□□□□ -0
AP3S2-206ENST00000558806 DDX54Q8TDD1 881 aaKnown RBP15.03■□□□□ -0
AP3S2-206ENST00000558806 RTL1A6NKG5 1358 aa15.02■□□□□ -0
AP3S2-206ENST00000558806 SLC27A3Q5K4L6 730 aa15.02■□□□□ -0
AP3S2-206ENST00000558806 SGIP1Q9BQI5 828 aa15.02■□□□□ -0
AP3S2-206ENST00000558806 FHDC1Q9C0D6 1143 aaPredicted RBP15.02■□□□□ -0
AP3S2-206ENST00000558806 TMF1P82094 1093 aa15.01□□□□□ -0.01
AP3S2-206ENST00000558806 SYT17Q9BSW7 474 aa15.01□□□□□ -0.01
AP3S2-206ENST00000558806 LRRC4BQ9NT99 713 aa15.01□□□□□ -0.01
AP3S2-206ENST00000558806 ZNF827Q17R98 1081 aa15□□□□□ -0.01
AP3S2-206ENST00000558806 ARXQ96QS3 562 aa15□□□□□ -0.01
AP3S2-206ENST00000558806 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
AP3S2-206ENST00000558806 SYTL4Q96C24 671 aaPredicted RBP14.99□□□□□ -0.01
AP3S2-206ENST00000558806 USP47Q96K76 1375 aa14.98□□□□□ -0.01
AP3S2-206ENST00000558806 FYB1O15117 783 aa14.98□□□□□ -0.01
AP3S2-206ENST00000558806 FBLN1P23142 703 aa14.98□□□□□ -0.01
AP3S2-206ENST00000558806 ZCRB1Q8TBF4 217 aaKnown RBP14.98□□□□□ -0.01
AP3S2-206ENST00000558806 SLC16A10Q8TF71 515 aa14.98□□□□□ -0.01
AP3S2-206ENST00000558806 SMG6Q86US8 1419 aaKnown RBP14.98□□□□□ -0.01
AP3S2-206ENST00000558806 UTRNP46939 3433 aa14.98□□□□□ -0.01
AP3S2-206ENST00000558806 MAP3K5Q99683 1374 aa14.98□□□□□ -0.01
AP3S2-206ENST00000558806 MEGF6O75095 1541 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms