RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 CRB1P82279 1406 aa17.31■□□□□ 0.36
CDC42BPB-202ENST00000558321 EDC4Q6P2E9 1401 aaKnown RBP17.31■□□□□ 0.36
CDC42BPB-202ENST00000558321 EP400Q96L91 3159 aa17.31■□□□□ 0.36
CDC42BPB-202ENST00000558321 A0A1W2PP64 1363 aa17.3■□□□□ 0.36
CDC42BPB-202ENST00000558321 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
CDC42BPB-202ENST00000558321 NINLQ9Y2I6 1382 aa17.3■□□□□ 0.36
CDC42BPB-202ENST00000558321 THSD7AQ9UPZ6 1657 aa17.3■□□□□ 0.36
CDC42BPB-202ENST00000558321 WDR17Q8IZU2 1322 aa17.3■□□□□ 0.36
CDC42BPB-202ENST00000558321 TRIM37O94972 964 aa17.29■□□□□ 0.36
CDC42BPB-202ENST00000558321 CDCA8Q53HL2 280 aa17.29■□□□□ 0.36
CDC42BPB-202ENST00000558321 MON2Q7Z3U7 1717 aa17.28■□□□□ 0.36
CDC42BPB-202ENST00000558321 EN1Q05925 392 aaPredicted RBP17.28■□□□□ 0.36
CDC42BPB-202ENST00000558321 CARD10Q9BWT7 1032 aa17.27■□□□□ 0.36
CDC42BPB-202ENST00000558321 DDB1Q16531 1140 aa17.26■□□□□ 0.35
CDC42BPB-202ENST00000558321 COG3Q96JB2 828 aa17.26■□□□□ 0.35
CDC42BPB-202ENST00000558321 APBA3O96018 575 aa17.25■□□□□ 0.35
CDC42BPB-202ENST00000558321 NFAT5O94916 1531 aa17.25■□□□□ 0.35
CDC42BPB-202ENST00000558321 CDCA7Q9BWT1 371 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-202ENST00000558321 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
CDC42BPB-202ENST00000558321 COL18A1P39060 1754 aa17.24■□□□□ 0.35
CDC42BPB-202ENST00000558321 ANKRD36BQ8N2N9 1353 aa17.24■□□□□ 0.35
CDC42BPB-202ENST00000558321 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
CDC42BPB-202ENST00000558321 EXOC5O00471 708 aa17.22■□□□□ 0.35
CDC42BPB-202ENST00000558321 ANKRD24Q8TF21 1146 aa17.22■□□□□ 0.35
CDC42BPB-202ENST00000558321 EZH2Q15910 746 aaKnown RBP17.21■□□□□ 0.35
CDC42BPB-202ENST00000558321 POLR3GLQ9BT43 218 aa17.21■□□□□ 0.35
CDC42BPB-202ENST00000558321 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
CDC42BPB-202ENST00000558321 RGPD1P0DJD0 1748 aa17.2■□□□□ 0.34
CDC42BPB-202ENST00000558321 OVOS2A0A0J9YW53 1432 aa17.2■□□□□ 0.34
CDC42BPB-202ENST00000558321 OVOS2Q6IE36 1432 aa17.2■□□□□ 0.34
CDC42BPB-202ENST00000558321 ERBB3P21860 1342 aa17.2■□□□□ 0.34
CDC42BPB-202ENST00000558321 AMPHP49418 695 aa17.19■□□□□ 0.34
CDC42BPB-202ENST00000558321 IP6K1Q92551 441 aa17.19■□□□□ 0.34
CDC42BPB-202ENST00000558321 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
CDC42BPB-202ENST00000558321 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
CDC42BPB-202ENST00000558321 RGPD5Q99666 1765 aa17.18■□□□□ 0.34
CDC42BPB-202ENST00000558321 ABCC6O95255 1503 aa17.18■□□□□ 0.34
CDC42BPB-202ENST00000558321 PSDA5PKW4 1024 aaPredicted RBP17.18■□□□□ 0.34
CDC42BPB-202ENST00000558321 FYB1O15117 783 aa17.18■□□□□ 0.34
CDC42BPB-202ENST00000558321 FBLN1P23142 703 aa17.18■□□□□ 0.34
CDC42BPB-202ENST00000558321 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
CDC42BPB-202ENST00000558321 MARCH10Q8NA82 808 aaPredicted RBP17.18■□□□□ 0.34
CDC42BPB-202ENST00000558321 CAMKK2Q96RR4 588 aa17.18■□□□□ 0.34
CDC42BPB-202ENST00000558321 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
CDC42BPB-202ENST00000558321 DISP2A7MBM2 1401 aa17.17■□□□□ 0.34
CDC42BPB-202ENST00000558321 PARP4Q9UKK3 1724 aaKnown RBP17.17■□□□□ 0.34
CDC42BPB-202ENST00000558321 USP54Q70EL1 1684 aa17.16■□□□□ 0.34
CDC42BPB-202ENST00000558321 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
CDC42BPB-202ENST00000558321 IL2RBP14784 551 aa17.15■□□□□ 0.34
CDC42BPB-202ENST00000558321 HSPA5P11021 654 aaKnown RBP17.14■□□□□ 0.33
CDC42BPB-202ENST00000558321 HOXC9P31274 260 aa17.14■□□□□ 0.33
CDC42BPB-202ENST00000558321 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
CDC42BPB-202ENST00000558321 RRS1Q15050 365 aaKnown RBP17.14■□□□□ 0.33
CDC42BPB-202ENST00000558321 CARD14Q9BXL6 1004 aa17.14■□□□□ 0.33
CDC42BPB-202ENST00000558321 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
CDC42BPB-202ENST00000558321 PARD3Q8TEW0 1356 aa17.14■□□□□ 0.33
CDC42BPB-202ENST00000558321 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
CDC42BPB-202ENST00000558321 TNS1Q9HBL0 1735 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-202ENST00000558321 LTN1O94822 1766 aa17.12■□□□□ 0.33
CDC42BPB-202ENST00000558321 LRRC37A3O60309 1634 aa17.12■□□□□ 0.33
CDC42BPB-202ENST00000558321 PTF1AQ7RTS3 328 aa17.1■□□□□ 0.33
CDC42BPB-202ENST00000558321 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
CDC42BPB-202ENST00000558321 PLSCR1O15162 318 aa17.09■□□□□ 0.33
CDC42BPB-202ENST00000558321 DDX54Q8TDD1 881 aaKnown RBP17.09■□□□□ 0.33
CDC42BPB-202ENST00000558321 TNS2Q63HR2 1409 aa17.08■□□□□ 0.32
CDC42BPB-202ENST00000558321 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
CDC42BPB-202ENST00000558321 ACSBG1Q96GR2 724 aa17.08■□□□□ 0.32
CDC42BPB-202ENST00000558321 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
CDC42BPB-202ENST00000558321 BCL9O00512 1426 aa17.07■□□□□ 0.32
CDC42BPB-202ENST00000558321 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
CDC42BPB-202ENST00000558321 WNK3Q9BYP7 1800 aa17.07■□□□□ 0.32
CDC42BPB-202ENST00000558321 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
CDC42BPB-202ENST00000558321 KCNQ2O43526 872 aa17.06■□□□□ 0.32
CDC42BPB-202ENST00000558321 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
CDC42BPB-202ENST00000558321 HSP90AB2PQ58FF8 381 aa17.05■□□□□ 0.32
CDC42BPB-202ENST00000558321 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
CDC42BPB-202ENST00000558321 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
CDC42BPB-202ENST00000558321 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
CDC42BPB-202ENST00000558321 PANK3Q9H999 370 aa17.04■□□□□ 0.32
CDC42BPB-202ENST00000558321 ZCRB1Q8TBF4 217 aaKnown RBP17.03■□□□□ 0.32
CDC42BPB-202ENST00000558321 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
CDC42BPB-202ENST00000558321 EMILIN1Q9Y6C2 1016 aa17.03■□□□□ 0.32
CDC42BPB-202ENST00000558321 MYOM1P52179 1685 aa17.03■□□□□ 0.32
CDC42BPB-202ENST00000558321 INSRP06213 1382 aa17.02■□□□□ 0.32
CDC42BPB-202ENST00000558321 FLT4P35916 1363 aa17.02■□□□□ 0.32
CDC42BPB-202ENST00000558321 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
CDC42BPB-202ENST00000558321 SBF2Q86WG5 1849 aa17.01■□□□□ 0.31
CDC42BPB-202ENST00000558321 KIF20BQ96Q89 1820 aa17.01■□□□□ 0.31
CDC42BPB-202ENST00000558321 TXNRD1Q16881 649 aa17.01■□□□□ 0.31
CDC42BPB-202ENST00000558321 PROM2Q8N271 834 aa17.01■□□□□ 0.31
CDC42BPB-202ENST00000558321 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
CDC42BPB-202ENST00000558321 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-202ENST00000558321 FAM208AQ9UK61 1670 aaKnown RBP17■□□□□ 0.31
CDC42BPB-202ENST00000558321 SYTL4Q96C24 671 aaPredicted RBP16.99■□□□□ 0.31
CDC42BPB-202ENST00000558321 SRCAPQ6ZRS2 3230 aa16.98■□□□□ 0.31
CDC42BPB-202ENST00000558321 RREB1Q92766 1687 aa16.98■□□□□ 0.31
CDC42BPB-202ENST00000558321 PRIM1P49642 420 aaKnown RBP16.98■□□□□ 0.31
CDC42BPB-202ENST00000558321 NUP188Q5SRE5 1749 aa16.97■□□□□ 0.31
CDC42BPB-202ENST00000558321 STK32BQ9NY57 414 aa16.97■□□□□ 0.31
CDC42BPB-202ENST00000558321 POLKQ9UBT6 870 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms