RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-210ENST00000556247 NGEFQ8N5V2 710 aa22.64■■□□□ 1.21
LRP1-210ENST00000556247 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
LRP1-210ENST00000556247 IQSEC2Q5JU85 1478 aa22.63■■□□□ 1.21
LRP1-210ENST00000556247 UBAP1LF5GYI3 381 aa22.63■■□□□ 1.21
LRP1-210ENST00000556247 NEFMP07197 916 aa22.63■■□□□ 1.21
LRP1-210ENST00000556247 CABLES1Q8TDN4 633 aa22.63■■□□□ 1.21
LRP1-210ENST00000556247 LTN1O94822 1766 aa22.63■■□□□ 1.21
LRP1-210ENST00000556247 MAPK8IP3Q9UPT6 1336 aa22.62■■□□□ 1.21
LRP1-210ENST00000556247 ZC3H6P61129 1189 aaKnown RBP22.62■■□□□ 1.21
LRP1-210ENST00000556247 LRRC59Q96AG4 307 aaKnown RBP22.62■■□□□ 1.21
LRP1-210ENST00000556247 HMOX1P09601 288 aa22.61■■□□□ 1.21
LRP1-210ENST00000556247 PIP4K2BP78356 416 aa22.61■■□□□ 1.21
LRP1-210ENST00000556247 TCP11L2Q8N4U5 519 aa22.61■■□□□ 1.21
LRP1-210ENST00000556247 CERKQ8TCT0 537 aa22.61■■□□□ 1.21
LRP1-210ENST00000556247 HAP1P54257 671 aaPredicted RBP22.6■■□□□ 1.21
LRP1-210ENST00000556247 LTV1Q96GA3 475 aaPredicted RBP22.6■■□□□ 1.21
LRP1-210ENST00000556247 PLEKHF1Q96S99 279 aa22.6■■□□□ 1.21
LRP1-210ENST00000556247 RSPH6AQ9H0K4 717 aa22.6■■□□□ 1.21
LRP1-210ENST00000556247 AHDC1Q5TGY3 1603 aaPredicted RBP22.6■■□□□ 1.21
LRP1-210ENST00000556247 PRKAR2BP31323 418 aa22.59■■□□□ 1.21
LRP1-210ENST00000556247 PDE3BQ13370 1112 aa22.59■■□□□ 1.21
LRP1-210ENST00000556247 PHRF1Q9P1Y6 1649 aaKnown RBP22.59■■□□□ 1.21
LRP1-210ENST00000556247 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
LRP1-210ENST00000556247 EYA1Q99502 592 aa22.56■■□□□ 1.2
LRP1-210ENST00000556247 NEUROD2Q15784 382 aa22.55■■□□□ 1.2
LRP1-210ENST00000556247 NCBP3Q53F19 620 aaKnown RBP22.55■■□□□ 1.2
LRP1-210ENST00000556247 RRP7AQ9Y3A4 280 aaKnown RBP22.55■■□□□ 1.2
LRP1-210ENST00000556247 CRYBG1Q9Y4K1 1723 aa22.54■■□□□ 1.2
LRP1-210ENST00000556247 CPDO75976 1380 aa22.53■■□□□ 1.2
LRP1-210ENST00000556247 TMPOP42166 694 aaKnown RBP22.53■■□□□ 1.2
LRP1-210ENST00000556247 IGSF1Q8N6C5 1336 aa22.53■■□□□ 1.2
LRP1-210ENST00000556247 PHLPP1O60346 1717 aa22.52■■□□□ 1.2
LRP1-210ENST00000556247 RGPD1P0DJD0 1748 aa22.52■■□□□ 1.2
LRP1-210ENST00000556247 AEBP1Q8IUX7 1158 aa22.52■■□□□ 1.2
LRP1-210ENST00000556247 ANKRD24Q8TF21 1146 aa22.52■■□□□ 1.2
LRP1-210ENST00000556247 KIAA0232Q92628 1395 aa22.51■■□□□ 1.19
LRP1-210ENST00000556247 AXIN2Q9Y2T1 843 aa22.51■■□□□ 1.19
LRP1-210ENST00000556247 GOLGA2Q08379 1002 aa22.5■■□□□ 1.19
LRP1-210ENST00000556247 CHRNA2Q15822 529 aa22.5■■□□□ 1.19
LRP1-210ENST00000556247 CCDC27Q2M243 656 aa22.5■■□□□ 1.19
LRP1-210ENST00000556247 PHACTR3Q96KR7 559 aa22.5■■□□□ 1.19
LRP1-210ENST00000556247 PRDM11Q9NQV5 511 aa22.5■■□□□ 1.19
LRP1-210ENST00000556247 ZNF521Q96K83 1311 aa22.5■■□□□ 1.19
LRP1-210ENST00000556247 RIPK4P57078 832 aa22.49■■□□□ 1.19
LRP1-210ENST00000556247 NFE2L2Q16236 605 aa22.49■■□□□ 1.19
LRP1-210ENST00000556247 WWC1Q8IX03 1113 aa22.49■■□□□ 1.19
LRP1-210ENST00000556247 ABCC6O95255 1503 aa22.47■■□□□ 1.19
LRP1-210ENST00000556247 NBPF6Q5VWK0 638 aa22.47■■□□□ 1.19
LRP1-210ENST00000556247 CDCA7LQ96GN5 454 aa22.47■■□□□ 1.19
LRP1-210ENST00000556247 NBPF4Q96M43 638 aa22.47■■□□□ 1.19
LRP1-210ENST00000556247 KDRP35968 1356 aa22.47■■□□□ 1.19
LRP1-210ENST00000556247 COL18A1P39060 1754 aa22.46■■□□□ 1.19
LRP1-210ENST00000556247 WDR63Q8IWG1 891 aa22.46■■□□□ 1.19
LRP1-210ENST00000556247 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
LRP1-210ENST00000556247 COL16A1Q07092 1604 aaPredicted RBP22.46■■□□□ 1.19
LRP1-210ENST00000556247 ABCA3Q99758 1704 aa22.45■■□□□ 1.19
LRP1-210ENST00000556247 USHBP1Q8N6Y0 703 aa22.45■■□□□ 1.18
LRP1-210ENST00000556247 RGPD5Q99666 1765 aa22.45■■□□□ 1.18
LRP1-210ENST00000556247 CSB-PGBD3P0DP91 1061 aa22.44■■□□□ 1.18
LRP1-210ENST00000556247 ERBB3P21860 1342 aa22.44■■□□□ 1.18
LRP1-210ENST00000556247 COL22A1Q8NFW1 1626 aaPredicted RBP22.43■■□□□ 1.18
LRP1-210ENST00000556247 LMOD3Q0VAK6 560 aa22.43■■□□□ 1.18
LRP1-210ENST00000556247 TRIM35Q9UPQ4 493 aa22.43■■□□□ 1.18
LRP1-210ENST00000556247 E9PSI1 815 aa22.42■■□□□ 1.18
LRP1-210ENST00000556247 SLFN5Q08AF3 891 aa22.42■■□□□ 1.18
LRP1-210ENST00000556247 NLRP2Q9NX02 1062 aa22.42■■□□□ 1.18
LRP1-210ENST00000556247 GAS2L2Q8NHY3 880 aa22.4■■□□□ 1.18
LRP1-210ENST00000556247 FAM83GA6ND36 823 aa22.39■■□□□ 1.17
LRP1-210ENST00000556247 RGPD2P0DJD1 1756 aa22.39■■□□□ 1.17
LRP1-210ENST00000556247 MTHFSDQ2M296 383 aaKnown RBP22.38■■□□□ 1.17
LRP1-210ENST00000556247 EVA1CP58658 441 aa22.37■■□□□ 1.17
LRP1-210ENST00000556247 CALD1Q05682 793 aaKnown RBP22.37■■□□□ 1.17
LRP1-210ENST00000556247 DUSP27Q5VZP5 1158 aa22.37■■□□□ 1.17
LRP1-210ENST00000556247 TRMT2AQ8IZ69 625 aaKnown RBP22.37■■□□□ 1.17
LRP1-210ENST00000556247 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
LRP1-210ENST00000556247 CAMTA1Q9Y6Y1 1673 aa22.36■■□□□ 1.17
LRP1-210ENST00000556247 SPINK5Q9NQ38 1064 aaPredicted RBP22.36■■□□□ 1.17
LRP1-210ENST00000556247 IL16Q14005 1332 aa22.35■■□□□ 1.17
LRP1-210ENST00000556247 NUTM2BA6NNL0 878 aaPredicted RBP22.35■■□□□ 1.17
LRP1-210ENST00000556247 NUTM2EB1AL46 878 aaPredicted RBP22.35■■□□□ 1.17
LRP1-210ENST00000556247 PLEKHO1Q53GL0 409 aaPredicted RBP22.35■■□□□ 1.17
LRP1-210ENST00000556247 NUTM2AQ8IVF1 878 aaPredicted RBP22.35■■□□□ 1.17
LRP1-210ENST00000556247 MYH16Q9H6N6 1097 aa22.35■■□□□ 1.17
LRP1-210ENST00000556247 LMO7Q8WWI1 1683 aa22.35■■□□□ 1.17
LRP1-210ENST00000556247 FAM208AQ9UK61 1670 aaKnown RBP22.35■■□□□ 1.17
LRP1-210ENST00000556247 WDR17Q8IZU2 1322 aa22.34■■□□□ 1.17
LRP1-210ENST00000556247 RAPGEF4Q8WZA2 1011 aa22.34■■□□□ 1.17
LRP1-210ENST00000556247 JCADQ9P266 1359 aa22.34■■□□□ 1.17
LRP1-210ENST00000556247 AMOTQ4VCS5 1084 aa22.33■■□□□ 1.17
LRP1-210ENST00000556247 TOM1L2Q6ZVM7 507 aa22.33■■□□□ 1.17
LRP1-210ENST00000556247 RTF1Q92541 710 aaKnown RBP22.33■■□□□ 1.17
LRP1-210ENST00000556247 STRN4Q9NRL3 753 aa22.33■■□□□ 1.17
LRP1-210ENST00000556247 SUPT16HQ9Y5B9 1047 aaKnown RBP22.33■■□□□ 1.17
LRP1-210ENST00000556247 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.16
LRP1-210ENST00000556247 ADAMTS2O95450 1211 aa22.32■■□□□ 1.16
LRP1-210ENST00000556247 TATP17735 454 aaPredicted RBP22.32■■□□□ 1.16
LRP1-210ENST00000556247 BTG4Q9NY30 223 aa22.32■■□□□ 1.16
LRP1-210ENST00000556247 COL5A2P05997 1499 aaPredicted RBP22.32■■□□□ 1.16
LRP1-210ENST00000556247 COL14A1Q05707 1796 aaKnown RBP22.32■■□□□ 1.16
LRP1-210ENST00000556247 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms