RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 LMO7Q8WWI1 1683 aa8.51□□□□□ -1.05
PRKCH-220ENST00000556164 CAMTA1Q9Y6Y1 1673 aa8.51□□□□□ -1.05
PRKCH-220ENST00000556164 PDE3BQ13370 1112 aa8.51□□□□□ -1.05
PRKCH-220ENST00000556164 HS6ST3Q8IZP7 471 aa8.51□□□□□ -1.05
PRKCH-220ENST00000556164 U3KPZ7 1027 aaPredicted RBP8.51□□□□□ -1.05
PRKCH-220ENST00000556164 SBF2Q86WG5 1849 aa8.51□□□□□ -1.05
PRKCH-220ENST00000556164 NBPF8Q3BBV2 869 aa8.5□□□□□ -1.05
PRKCH-220ENST00000556164 NBPF14Q5TI25 921 aa8.5□□□□□ -1.05
PRKCH-220ENST00000556164 LARP1Q6PKG0 1096 aaKnown RBP8.5□□□□□ -1.05
PRKCH-220ENST00000556164 BARGINQ6ZT62 677 aa8.5□□□□□ -1.05
PRKCH-220ENST00000556164 CDK19Q9BWU1 502 aa8.5□□□□□ -1.05
PRKCH-220ENST00000556164 ACEP12821 1306 aa8.5□□□□□ -1.05
PRKCH-220ENST00000556164 POLR3AO14802 1390 aaPredicted RBP8.49□□□□□ -1.05
PRKCH-220ENST00000556164 KIAA1210Q9ULL0 1709 aa8.49□□□□□ -1.05
PRKCH-220ENST00000556164 TCP11L2Q8N4U5 519 aa8.49□□□□□ -1.05
PRKCH-220ENST00000556164 ABTB2Q8N961 1025 aa8.49□□□□□ -1.05
PRKCH-220ENST00000556164 RGPD3A6NKT7 1758 aaPredicted RBP8.48□□□□□ -1.05
PRKCH-220ENST00000556164 AKAP12Q02952 1782 aa8.48□□□□□ -1.05
PRKCH-220ENST00000556164 RGPD4Q7Z3J3 1758 aa8.48□□□□□ -1.05
PRKCH-220ENST00000556164 WNK3Q9BYP7 1800 aa8.48□□□□□ -1.05
PRKCH-220ENST00000556164 YY1P25490 414 aa8.48□□□□□ -1.05
PRKCH-220ENST00000556164 STAC3Q96MF2 364 aa8.48□□□□□ -1.05
PRKCH-220ENST00000556164 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
PRKCH-220ENST00000556164 CCDC61Q9Y6R9 512 aa8.48□□□□□ -1.05
PRKCH-220ENST00000556164 CPDO75976 1380 aa8.48□□□□□ -1.05
PRKCH-220ENST00000556164 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
PRKCH-220ENST00000556164 COL5A2P05997 1499 aaPredicted RBP8.47□□□□□ -1.05
PRKCH-220ENST00000556164 PEAK1Q9H792 1746 aa8.47□□□□□ -1.05
PRKCH-220ENST00000556164 ZBTB7CA1YPR0 619 aa8.47□□□□□ -1.05
PRKCH-220ENST00000556164 THRAP3Q9Y2W1 955 aaKnown RBP8.47□□□□□ -1.05
PRKCH-220ENST00000556164 USP19O94966 1318 aa8.47□□□□□ -1.05
PRKCH-220ENST00000556164 QRICH2Q9H0J4 1663 aa8.46□□□□□ -1.05
PRKCH-220ENST00000556164 OVOS2A0A0G2JMS6 1433 aa8.46□□□□□ -1.05
PRKCH-220ENST00000556164 OVOS2A0A0J9YW53 1432 aa8.46□□□□□ -1.05
PRKCH-220ENST00000556164 OVOS2Q6IE36 1432 aa8.46□□□□□ -1.05
PRKCH-220ENST00000556164 PPIP5K1Q6PFW1 1433 aa8.46□□□□□ -1.05
PRKCH-220ENST00000556164 RGPD5Q99666 1765 aa8.46□□□□□ -1.05
PRKCH-220ENST00000556164 PLEKHG3A1L390 1219 aa8.46□□□□□ -1.06
PRKCH-220ENST00000556164 DCAF8L1A6NGE4 600 aa8.46□□□□□ -1.06
PRKCH-220ENST00000556164 NLRP13Q86W25 1043 aa8.46□□□□□ -1.06
PRKCH-220ENST00000556164 RNF39Q9H2S5 420 aa8.46□□□□□ -1.06
PRKCH-220ENST00000556164 SPON1Q9HCB6 807 aa8.46□□□□□ -1.06
PRKCH-220ENST00000556164 CRB1P82279 1406 aa8.46□□□□□ -1.06
PRKCH-220ENST00000556164 CASZ1Q86V15 1759 aa8.45□□□□□ -1.06
PRKCH-220ENST00000556164 KCNQ2O43526 872 aa8.45□□□□□ -1.06
PRKCH-220ENST00000556164 GCP02774 474 aa8.45□□□□□ -1.06
PRKCH-220ENST00000556164 SRPK2P78362 688 aaKnown RBP8.45□□□□□ -1.06
PRKCH-220ENST00000556164 NINLQ9Y2I6 1382 aa8.45□□□□□ -1.06
PRKCH-220ENST00000556164 COL18A1P39060 1754 aa8.44□□□□□ -1.06
PRKCH-220ENST00000556164 C11orf95C9JLR9 678 aaPredicted RBP8.44□□□□□ -1.06
PRKCH-220ENST00000556164 NPM2Q86SE8 214 aaKnown RBP8.44□□□□□ -1.06
PRKCH-220ENST00000556164 PIK3C2AO00443 1686 aa8.43□□□□□ -1.06
PRKCH-220ENST00000556164 MYOM1P52179 1685 aa8.43□□□□□ -1.06
PRKCH-220ENST00000556164 KAT6BQ8WYB5 2073 aa8.43□□□□□ -1.06
PRKCH-220ENST00000556164 DDB1Q16531 1140 aa8.43□□□□□ -1.06
PRKCH-220ENST00000556164 TOM1L2Q6ZVM7 507 aa8.43□□□□□ -1.06
PRKCH-220ENST00000556164 CABP2Q9NPB3 220 aa8.43□□□□□ -1.06
PRKCH-220ENST00000556164 CENPJQ9HC77 1338 aaPredicted RBP8.43□□□□□ -1.06
PRKCH-220ENST00000556164 SLIT3O75094 1523 aa8.43□□□□□ -1.06
PRKCH-220ENST00000556164 BRPF1P55201 1214 aaPredicted RBP8.42□□□□□ -1.06
PRKCH-220ENST00000556164 NLRP6P59044 892 aa8.42□□□□□ -1.06
PRKCH-220ENST00000556164 NBPF1Q3BBV0 1214 aa8.42□□□□□ -1.06
PRKCH-220ENST00000556164 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
PRKCH-220ENST00000556164 BRD4O60885 1362 aaPredicted RBP8.42□□□□□ -1.06
PRKCH-220ENST00000556164 AATKQ6ZMQ8 1374 aa8.42□□□□□ -1.06
PRKCH-220ENST00000556164 USP6P35125 1406 aa8.42□□□□□ -1.06
PRKCH-220ENST00000556164 CHD4Q14839 1912 aa8.42□□□□□ -1.06
PRKCH-220ENST00000556164 PLSCR1O15162 318 aa8.41□□□□□ -1.06
PRKCH-220ENST00000556164 PTF1AQ7RTS3 328 aa8.41□□□□□ -1.06
PRKCH-220ENST00000556164 BCL11BQ9C0K0 894 aaPredicted RBP8.41□□□□□ -1.06
PRKCH-220ENST00000556164 CPSF1Q10570 1443 aaKnown RBP8.4□□□□□ -1.06
PRKCH-220ENST00000556164 ZBTB7AO95365 584 aa8.4□□□□□ -1.06
PRKCH-220ENST00000556164 PDGFDQ9GZP0 370 aaPredicted RBP8.4□□□□□ -1.06
PRKCH-220ENST00000556164 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
PRKCH-220ENST00000556164 TRPM1Q7Z4N2 1603 aa8.4□□□□□ -1.07
PRKCH-220ENST00000556164 WDR17Q8IZU2 1322 aa8.39□□□□□ -1.07
PRKCH-220ENST00000556164 SOX12O15370 315 aa8.39□□□□□ -1.07
PRKCH-220ENST00000556164 CSB-PGBD3P0DP91 1061 aa8.39□□□□□ -1.07
PRKCH-220ENST00000556164 MARCH10Q8NA82 808 aaPredicted RBP8.39□□□□□ -1.07
PRKCH-220ENST00000556164 NHSQ6T4R5 1651 aa8.38□□□□□ -1.07
PRKCH-220ENST00000556164 TRIM26Q12899 539 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-220ENST00000556164 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-220ENST00000556164 STK32BQ9NY57 414 aa8.38□□□□□ -1.07
PRKCH-220ENST00000556164 AXIN2Q9Y2T1 843 aa8.38□□□□□ -1.07
PRKCH-220ENST00000556164 LTN1O94822 1766 aa8.38□□□□□ -1.07
PRKCH-220ENST00000556164 BCL9O00512 1426 aa8.37□□□□□ -1.07
PRKCH-220ENST00000556164 EVC2Q86UK5 1308 aa8.37□□□□□ -1.07
PRKCH-220ENST00000556164 PTGER2P43116 358 aa8.37□□□□□ -1.07
PRKCH-220ENST00000556164 TXNRD1Q16881 649 aa8.37□□□□□ -1.07
PRKCH-220ENST00000556164 BTAF1O14981 1849 aa8.37□□□□□ -1.07
PRKCH-220ENST00000556164 MON2Q7Z3U7 1717 aa8.37□□□□□ -1.07
PRKCH-220ENST00000556164 TTC21BQ7Z4L5 1316 aa8.36□□□□□ -1.07
PRKCH-220ENST00000556164 NFAT5O94916 1531 aa8.36□□□□□ -1.07
PRKCH-220ENST00000556164 EXOC5O00471 708 aa8.36□□□□□ -1.07
PRKCH-220ENST00000556164 ARHGEF25Q86VW2 580 aa8.36□□□□□ -1.07
PRKCH-220ENST00000556164 KCNH5Q8NCM2 988 aa8.36□□□□□ -1.07
PRKCH-220ENST00000556164 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
PRKCH-220ENST00000556164 TNS2Q63HR2 1409 aa8.36□□□□□ -1.07
PRKCH-220ENST00000556164 CCDC7Q96M83 1385 aa8.35□□□□□ -1.07
PRKCH-220ENST00000556164 ABCC6O95255 1503 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms