RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 EVA1CP58658 441 aa13.43□□□□□ -0.26
ACTN1-215ENST00000555616 MYT1Q01538 1121 aa13.43□□□□□ -0.26
ACTN1-215ENST00000555616 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
ACTN1-215ENST00000555616 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
ACTN1-215ENST00000555616 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
ACTN1-215ENST00000555616 PARP4Q9UKK3 1724 aaKnown RBP13.42□□□□□ -0.26
ACTN1-215ENST00000555616 ZBTB7CA1YPR0 619 aa13.41□□□□□ -0.26
ACTN1-215ENST00000555616 THRAP3Q9Y2W1 955 aaKnown RBP13.41□□□□□ -0.26
ACTN1-215ENST00000555616 WDR17Q8IZU2 1322 aa13.4□□□□□ -0.26
ACTN1-215ENST00000555616 SOX12O15370 315 aa13.4□□□□□ -0.26
ACTN1-215ENST00000555616 AXIN2Q9Y2T1 843 aa13.4□□□□□ -0.26
ACTN1-215ENST00000555616 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
ACTN1-215ENST00000555616 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
ACTN1-215ENST00000555616 USP35Q9P2H5 1018 aa13.39□□□□□ -0.27
ACTN1-215ENST00000555616 LTN1O94822 1766 aa13.38□□□□□ -0.27
ACTN1-215ENST00000555616 DISP2A7MBM2 1401 aa13.38□□□□□ -0.27
ACTN1-215ENST00000555616 RGPD1P0DJD0 1748 aa13.37□□□□□ -0.27
ACTN1-215ENST00000555616 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.276e-7■■■■■ 48.9
ACTN1-215ENST00000555616 ERBB3P21860 1342 aa13.37□□□□□ -0.27
ACTN1-215ENST00000555616 TNS1Q9HBL0 1735 aaKnown RBP13.36□□□□□ -0.27
ACTN1-215ENST00000555616 TOM1L2Q6ZVM7 507 aa13.36□□□□□ -0.27
ACTN1-215ENST00000555616 RGPD5Q99666 1765 aa13.35□□□□□ -0.27
ACTN1-215ENST00000555616 CCDC7Q96M83 1385 aa13.35□□□□□ -0.27
ACTN1-215ENST00000555616 HSPA5P11021 654 aaKnown RBP13.35□□□□□ -0.27
ACTN1-215ENST00000555616 COG3Q96JB2 828 aa13.35□□□□□ -0.27
ACTN1-215ENST00000555616 CARD10Q9BWT7 1032 aa13.35□□□□□ -0.27
ACTN1-215ENST00000555616 PEAK1Q9H792 1746 aa13.35□□□□□ -0.27
ACTN1-215ENST00000555616 KIF20BQ96Q89 1820 aa13.34□□□□□ -0.27
ACTN1-215ENST00000555616 NSD3Q9BZ95 1437 aa13.34□□□□□ -0.27
ACTN1-215ENST00000555616 SF3B2Q13435 895 aaKnown RBP13.34□□□□□ -0.27
ACTN1-215ENST00000555616 FAM182BQ5T319 152 aa13.34□□□□□ -0.27
ACTN1-215ENST00000555616 RTL1A6NKG5 1358 aa13.33□□□□□ -0.27
ACTN1-215ENST00000555616 OVOS2A0A0G2JMS6 1433 aa13.33□□□□□ -0.28
ACTN1-215ENST00000555616 FYB1O15117 783 aa13.33□□□□□ -0.28
ACTN1-215ENST00000555616 CSB-PGBD3P0DP91 1061 aa13.33□□□□□ -0.28
ACTN1-215ENST00000555616 PDE3BQ13370 1112 aa13.33□□□□□ -0.28
ACTN1-215ENST00000555616 FAM196AQ6ZSG2 479 aa13.33□□□□□ -0.28
ACTN1-215ENST00000555616 CDCA7Q9BWT1 371 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-215ENST00000555616 FAM208AQ9UK61 1670 aaKnown RBP13.33□□□□□ -0.28
ACTN1-215ENST00000555616 MAP3K19Q56UN5 1328 aa13.33□□□□□ -0.28
ACTN1-215ENST00000555616 TNS2Q63HR2 1409 aa13.32□□□□□ -0.28
ACTN1-215ENST00000555616 DEFB132Q7Z7B7 95 aa13.32□□□□□ -0.28
ACTN1-215ENST00000555616 CARD14Q9BXL6 1004 aa13.32□□□□□ -0.28
ACTN1-215ENST00000555616 IP6K1Q92551 441 aa13.31□□□□□ -0.28
ACTN1-215ENST00000555616 GGNBP2Q9H3C7 697 aa13.31□□□□□ -0.28
ACTN1-215ENST00000555616 LRP5O75197 1615 aa13.31□□□□□ -0.28
ACTN1-215ENST00000555616 BCL9O00512 1426 aa13.3□□□□□ -0.28
ACTN1-215ENST00000555616 ZNF316A6NFI3 1004 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-215ENST00000555616 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-215ENST00000555616 BAG6P46379 1132 aa13.3□□□□□ -0.28
ACTN1-215ENST00000555616 DDB1Q16531 1140 aa13.3□□□□□ -0.28
ACTN1-215ENST00000555616 ANKRD24Q8TF21 1146 aa13.3□□□□□ -0.28
ACTN1-215ENST00000555616 SRCAPQ6ZRS2 3230 aa13.3□□□□□ -0.28
ACTN1-215ENST00000555616 KIF24Q5T7B8 1368 aa13.29□□□□□ -0.28
ACTN1-215ENST00000555616 PARD3Q8TEW0 1356 aa13.29□□□□□ -0.28
ACTN1-215ENST00000555616 ANKRD26Q9UPS8 1709 aa13.28□□□□□ -0.28
ACTN1-215ENST00000555616 TRIM37O94972 964 aa13.28□□□□□ -0.28
ACTN1-215ENST00000555616 HOXC9P31274 260 aa13.28□□□□□ -0.28
ACTN1-215ENST00000555616 NLRP2Q9NX02 1062 aa13.28□□□□□ -0.28
ACTN1-215ENST00000555616 CGNL1Q0VF96 1302 aa13.28□□□□□ -0.28
ACTN1-215ENST00000555616 RGPD3A6NKT7 1758 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-215ENST00000555616 FBLN1P23142 703 aa13.26□□□□□ -0.29
ACTN1-215ENST00000555616 FLT4P35916 1363 aa13.26□□□□□ -0.29
ACTN1-215ENST00000555616 AMPHP49418 695 aa13.26□□□□□ -0.29
ACTN1-215ENST00000555616 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
ACTN1-215ENST00000555616 RGPD4Q7Z3J3 1758 aa13.26□□□□□ -0.29
ACTN1-215ENST00000555616 MARCH10Q8NA82 808 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-215ENST00000555616 RREB1Q92766 1687 aa13.26□□□□□ -0.29
ACTN1-215ENST00000555616 SMG6Q86US8 1419 aaKnown RBP13.25□□□□□ -0.29
ACTN1-215ENST00000555616 INSRP06213 1382 aa13.25□□□□□ -0.29
ACTN1-215ENST00000555616 IL2RBP14784 551 aa13.25□□□□□ -0.29
ACTN1-215ENST00000555616 EN1Q05925 392 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-215ENST00000555616 CAMKK2Q96RR4 588 aa13.24□□□□□ -0.29
ACTN1-215ENST00000555616 POLR3GLQ9BT43 218 aa13.24□□□□□ -0.29
ACTN1-215ENST00000555616 NSD2O96028 1365 aa13.23□□□□□ -0.29
ACTN1-215ENST00000555616 EXOC5O00471 708 aa13.23□□□□□ -0.29
ACTN1-215ENST00000555616 APBA3O96018 575 aa13.23□□□□□ -0.29
ACTN1-215ENST00000555616 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-215ENST00000555616 MEGF6O75095 1541 aa13.23□□□□□ -0.29
ACTN1-215ENST00000555616 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
ACTN1-215ENST00000555616 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
ACTN1-215ENST00000555616 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
ACTN1-215ENST00000555616 NUP188Q5SRE5 1749 aa13.22□□□□□ -0.29
ACTN1-215ENST00000555616 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
ACTN1-215ENST00000555616 EZH2Q15910 746 aaKnown RBP13.21□□□□□ -0.29
ACTN1-215ENST00000555616 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-215ENST00000555616 PANK3Q9H999 370 aa13.21□□□□□ -0.29
ACTN1-215ENST00000555616 EMILIN1Q9Y6C2 1016 aa13.21□□□□□ -0.29
ACTN1-215ENST00000555616 HSP90AB2PQ58FF8 381 aa13.2□□□□□ -0.3
ACTN1-215ENST00000555616 RGPD2P0DJD1 1756 aa13.2□□□□□ -0.3
ACTN1-215ENST00000555616 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
ACTN1-215ENST00000555616 NBPF6Q5VWK0 638 aa13.19□□□□□ -0.3
ACTN1-215ENST00000555616 PTF1AQ7RTS3 328 aa13.19□□□□□ -0.3
ACTN1-215ENST00000555616 NBPF4Q96M43 638 aa13.19□□□□□ -0.3
ACTN1-215ENST00000555616 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
ACTN1-215ENST00000555616 PLSCR1O15162 318 aa13.17□□□□□ -0.3
ACTN1-215ENST00000555616 POLKQ9UBT6 870 aa13.17□□□□□ -0.3
ACTN1-215ENST00000555616 USHBP1Q8N6Y0 703 aa13.16□□□□□ -0.3
ACTN1-215ENST00000555616 PSDA5PKW4 1024 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-215ENST00000555616 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms