RNA–Protein interactions for RNA: ENST00000555057.5

TTC8-210, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 1 (best)

Gene TTC8, Length 2,113 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-210ENST00000555057 WDR43Q15061 677 aaKnown RBP eCLIP16.66■□□□□ 0.26
TTC8-210ENST00000555057 PRDM11Q9NQV5 511 aa16.66■□□□□ 0.26
TTC8-210ENST00000555057 PEAK1Q9H792 1746 aa16.66■□□□□ 0.26
TTC8-210ENST00000555057 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
TTC8-210ENST00000555057 JCADQ9P266 1359 aa16.65■□□□□ 0.26
TTC8-210ENST00000555057 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
TTC8-210ENST00000555057 U2AF1L5P0DN76 240 aaPredicted RBP16.64■□□□□ 0.25
TTC8-210ENST00000555057 U2AF1Q01081 240 aaKnown RBP eCLIP16.64■□□□□ 0.25
TTC8-210ENST00000555057 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
TTC8-210ENST00000555057 CDK12Q9NYV4 1490 aaPredicted RBP16.64■□□□□ 0.25
TTC8-210ENST00000555057 YTHDC1Q96MU7 727 aaKnown RBP16.64■□□□□ 0.25
TTC8-210ENST00000555057 CRYBG1Q9Y4K1 1723 aa16.63■□□□□ 0.25
TTC8-210ENST00000555057 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
TTC8-210ENST00000555057 CPDO75976 1380 aa16.63■□□□□ 0.25
TTC8-210ENST00000555057 LTN1O94822 1766 aa16.63■□□□□ 0.25
TTC8-210ENST00000555057 KIF24Q5T7B8 1368 aa16.62■□□□□ 0.25
TTC8-210ENST00000555057 ANKRD24Q8TF21 1146 aa16.61■□□□□ 0.25
TTC8-210ENST00000555057 HMOX1P09601 288 aa16.61■□□□□ 0.25
TTC8-210ENST00000555057 FBXO41Q8TF61 875 aa16.61■□□□□ 0.25
TTC8-210ENST00000555057 EYA1Q99502 592 aa16.61■□□□□ 0.25
TTC8-210ENST00000555057 RTL1A6NKG5 1358 aa16.61■□□□□ 0.25
TTC8-210ENST00000555057 COL22A1Q8NFW1 1626 aaPredicted RBP16.6■□□□□ 0.25
TTC8-210ENST00000555057 CCDC146Q8IYE0 955 aa16.6■□□□□ 0.25
TTC8-210ENST00000555057 NBPF6Q5VWK0 638 aa16.59■□□□□ 0.25
TTC8-210ENST00000555057 NBPF4Q96M43 638 aa16.59■□□□□ 0.25
TTC8-210ENST00000555057 SULT6B1Q6IMI4 303 aa16.58■□□□□ 0.25
TTC8-210ENST00000555057 BTG4Q9NY30 223 aa16.58■□□□□ 0.25
TTC8-210ENST00000555057 ABCA3Q99758 1704 aa16.58■□□□□ 0.25
TTC8-210ENST00000555057 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
TTC8-210ENST00000555057 EVA1CP58658 441 aa16.58■□□□□ 0.24
TTC8-210ENST00000555057 AEBP1Q8IUX7 1158 aa16.58■□□□□ 0.24
TTC8-210ENST00000555057 USHBP1Q8N6Y0 703 aa16.58■□□□□ 0.24
TTC8-210ENST00000555057 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
TTC8-210ENST00000555057 RGPD5Q99666 1765 aa16.57■□□□□ 0.24
TTC8-210ENST00000555057 SPATA31A6Q5VVP1 1343 aa16.57■□□□□ 0.24
TTC8-210ENST00000555057 SHPRHQ149N8 1683 aa16.57■□□□□ 0.24
TTC8-210ENST00000555057 COL18A1P39060 1754 aa16.57■□□□□ 0.24
TTC8-210ENST00000555057 CAMTA1Q9Y6Y1 1673 aa16.57■□□□□ 0.24
TTC8-210ENST00000555057 ERBB3P21860 1342 aa16.56■□□□□ 0.24
TTC8-210ENST00000555057 BLMP54132 1417 aaPredicted RBP16.56■□□□□ 0.24
TTC8-210ENST00000555057 NLRP2Q9NX02 1062 aa16.56■□□□□ 0.24
TTC8-210ENST00000555057 FCHSD2O94868 740 aa16.55■□□□□ 0.24
TTC8-210ENST00000555057 C8orf37Q96NL8 207 aa16.55■□□□□ 0.24
TTC8-210ENST00000555057 NGLY1Q96IV0 654 aa16.55■□□□□ 0.24
TTC8-210ENST00000555057 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
TTC8-210ENST00000555057 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
TTC8-210ENST00000555057 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
TTC8-210ENST00000555057 SALL2Q9Y467 1007 aaPredicted RBP16.54■□□□□ 0.24
TTC8-210ENST00000555057 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
TTC8-210ENST00000555057 PLEKHF1Q96S99 279 aa16.54■□□□□ 0.24
TTC8-210ENST00000555057 IGSF1Q8N6C5 1336 aa16.54■□□□□ 0.24
TTC8-210ENST00000555057 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
TTC8-210ENST00000555057 APAF1O14727 1248 aa16.52■□□□□ 0.24
TTC8-210ENST00000555057 MEX3CQ5U5Q3 659 aaKnown RBP16.52■□□□□ 0.24
TTC8-210ENST00000555057 TOM1L2Q6ZVM7 507 aa16.52■□□□□ 0.24
TTC8-210ENST00000555057 RUNDC1Q96C34 613 aa16.52■□□□□ 0.24
TTC8-210ENST00000555057 LRP6O75581 1613 aa16.52■□□□□ 0.24
TTC8-210ENST00000555057 WDR17Q8IZU2 1322 aa16.51■□□□□ 0.23
TTC8-210ENST00000555057 USP35Q9P2H5 1018 aa16.51■□□□□ 0.23
TTC8-210ENST00000555057 NEUROD2Q15784 382 aa16.51■□□□□ 0.23
TTC8-210ENST00000555057 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
TTC8-210ENST00000555057 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
TTC8-210ENST00000555057 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
TTC8-210ENST00000555057 PNNQ9H307 717 aaKnown RBP16.5■□□□□ 0.23
TTC8-210ENST00000555057 RRP7AQ9Y3A4 280 aaKnown RBP16.5■□□□□ 0.23
TTC8-210ENST00000555057 RGPD2P0DJD1 1756 aa16.5■□□□□ 0.23
TTC8-210ENST00000555057 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
TTC8-210ENST00000555057 ABCC6O95255 1503 aa16.48■□□□□ 0.23
TTC8-210ENST00000555057 RGPD1P0DJD0 1748 aa16.48■□□□□ 0.23
TTC8-210ENST00000555057 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
TTC8-210ENST00000555057 NEFMP07197 916 aa16.47■□□□□ 0.23
TTC8-210ENST00000555057 FNBP4Q8N3X1 1017 aaPredicted RBP16.47■□□□□ 0.23
TTC8-210ENST00000555057 CARD10Q9BWT7 1032 aa16.47■□□□□ 0.23
TTC8-210ENST00000555057 KDRP35968 1356 aa16.47■□□□□ 0.23
TTC8-210ENST00000555057 UNC5CLQ8IV45 518 aa16.46■□□□□ 0.23
TTC8-210ENST00000555057 USP21Q9UK80 565 aa16.46■□□□□ 0.23
TTC8-210ENST00000555057 SLIT2O94813 1529 aa16.45■□□□□ 0.22
TTC8-210ENST00000555057 TMPOP42166 694 aaKnown RBP16.45■□□□□ 0.22
TTC8-210ENST00000555057 CCDC9Q9Y3X0 531 aaKnown RBP16.45■□□□□ 0.22
TTC8-210ENST00000555057 MTHFSDQ2M296 383 aaKnown RBP16.45■□□□□ 0.22
TTC8-210ENST00000555057 BCL9LQ86UU0 1499 aa16.44■□□□□ 0.22
TTC8-210ENST00000555057 RIPK4P57078 832 aa16.44■□□□□ 0.22
TTC8-210ENST00000555057 RAPGEF4Q8WZA2 1011 aa16.44■□□□□ 0.22
TTC8-210ENST00000555057 AFF2P51816 1311 aa16.44■□□□□ 0.22
TTC8-210ENST00000555057 CRB1P82279 1406 aa16.43■□□□□ 0.22
TTC8-210ENST00000555057 PLCH1Q4KWH8 1693 aa16.42■□□□□ 0.22
TTC8-210ENST00000555057 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
TTC8-210ENST00000555057 NCAPD2Q15021 1401 aa16.42■□□□□ 0.22
TTC8-210ENST00000555057 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
TTC8-210ENST00000555057 SPATA31A1Q5TZJ5 1347 aa16.41■□□□□ 0.22
TTC8-210ENST00000555057 IL2RBP14784 551 aa16.4■□□□□ 0.22
TTC8-210ENST00000555057 PLEKHO1Q53GL0 409 aaPredicted RBP16.4■□□□□ 0.22
TTC8-210ENST00000555057 SPATA31A5Q5VU36 1347 aa16.4■□□□□ 0.22
TTC8-210ENST00000555057 SPATA31A7Q8IWB4 1347 aa16.4■□□□□ 0.22
TTC8-210ENST00000555057 VPS72Q15906 364 aa16.4■□□□□ 0.22
TTC8-210ENST00000555057 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
TTC8-210ENST00000555057 WWC1Q8IX03 1113 aa16.39■□□□□ 0.21
TTC8-210ENST00000555057 AMOTQ4VCS5 1084 aa16.39■□□□□ 0.21
TTC8-210ENST00000555057 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
TTC8-210ENST00000555057 MEGF6O75095 1541 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms