RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 KIF20BQ96Q89 1820 aa15.17■□□□□ 0.02
PNN-203ENST00000554117 AATKQ6ZMQ8 1374 aa15.16■□□□□ 0.02
PNN-203ENST00000554117 LARP1Q6PKG0 1096 aaKnown RBP15.16■□□□□ 0.02
PNN-203ENST00000554117 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
PNN-203ENST00000554117 PARD3Q8TEW0 1356 aa15.15■□□□□ 0.02
PNN-203ENST00000554117 CSB-PGBD3P0DP91 1061 aa15.15■□□□□ 0.02
PNN-203ENST00000554117 FAM182BQ5T319 152 aa15.15■□□□□ 0.02
PNN-203ENST00000554117 TERF2IPQ9NYB0 399 aa15.15■□□□□ 0.02
PNN-203ENST00000554117 CPSF1Q10570 1443 aaKnown RBP15.15■□□□□ 0.02
PNN-203ENST00000554117 SOX12O15370 315 aa15.14■□□□□ 0.01
PNN-203ENST00000554117 EN1Q05925 392 aaPredicted RBP15.14■□□□□ 0.01
PNN-203ENST00000554117 CDCA7Q9BWT1 371 aaPredicted RBP15.14■□□□□ 0.01
PNN-203ENST00000554117 OVOS2A0A0G2JMS6 1433 aa15.13■□□□□ 0.01
PNN-203ENST00000554117 OVOS2A0A0J9YW53 1432 aa15.13■□□□□ 0.01
PNN-203ENST00000554117 DISP2A7MBM2 1401 aa15.13■□□□□ 0.01
PNN-203ENST00000554117 TRIM37O94972 964 aa15.13■□□□□ 0.01
PNN-203ENST00000554117 OVOS2Q6IE36 1432 aa15.13■□□□□ 0.01
PNN-203ENST00000554117 APBA3O96018 575 aa15.12■□□□□ 0.01
PNN-203ENST00000554117 DDB1Q16531 1140 aa15.12■□□□□ 0.01
PNN-203ENST00000554117 PEAK1Q9H792 1746 aa15.12■□□□□ 0.01
PNN-203ENST00000554117 NINLQ9Y2I6 1382 aa15.11■□□□□ 0.01
PNN-203ENST00000554117 NBPF14Q5TI25 921 aa15.11■□□□□ 0.01
PNN-203ENST00000554117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.11■□□□□ 0.01
PNN-203ENST00000554117 WDR17Q8IZU2 1322 aa15.11■□□□□ 0.01
PNN-203ENST00000554117 EDC4Q6P2E9 1401 aaKnown RBP15.1■□□□□ 0.01
PNN-203ENST00000554117 NFAT5O94916 1531 aa15.1■□□□□ 0.01
PNN-203ENST00000554117 RGPD2P0DJD1 1756 aa15.09■□□□□ 0.01
PNN-203ENST00000554117 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
PNN-203ENST00000554117 CCDC7Q96M83 1385 aa15.09■□□□□ 0.01
PNN-203ENST00000554117 PSDA5PKW4 1024 aaPredicted RBP15.08■□□□□ 0
PNN-203ENST00000554117 EZH2Q15910 746 aaKnown RBP15.08■□□□□ 0
PNN-203ENST00000554117 ARHGEF25Q86VW2 580 aa15.07■□□□□ 0
PNN-203ENST00000554117 NHSQ6T4R5 1651 aa15.06■□□□□ 0
PNN-203ENST00000554117 CDCA8Q53HL2 280 aa15.06■□□□□ 0
PNN-203ENST00000554117 USP31Q70CQ4 1352 aa15.06■□□□□ 0
PNN-203ENST00000554117 EXOC5O00471 708 aa15.05■□□□□ -0
PNN-203ENST00000554117 TMF1P82094 1093 aa15.05■□□□□ -0
PNN-203ENST00000554117 CARD10Q9BWT7 1032 aa15.05■□□□□ -0
PNN-203ENST00000554117 BTAF1O14981 1849 aa15.05■□□□□ -0
PNN-203ENST00000554117 MAP2P11137 1827 aaKnown RBP15.05■□□□□ -0
PNN-203ENST00000554117 A0A1W2PP64 1363 aa15.04■□□□□ -0
PNN-203ENST00000554117 R3HDM1Q15032 1099 aaKnown RBP15.04■□□□□ -0
PNN-203ENST00000554117 CD163L1Q9NR16 1453 aa15.03■□□□□ -0
PNN-203ENST00000554117 ST20-MTHFSA0A0A6YYL1 179 aa15.03■□□□□ -0
PNN-203ENST00000554117 COG3Q96JB2 828 aa15.03■□□□□ -0
PNN-203ENST00000554117 SLC12A5Q9H2X9 1139 aa15.03■□□□□ -0
PNN-203ENST00000554117 NME9Q86XW9 330 aa15.02■□□□□ -0
PNN-203ENST00000554117 CAMKK2Q96RR4 588 aa15.02■□□□□ -0
PNN-203ENST00000554117 NLRP2Q9NX02 1062 aa15.02■□□□□ -0
PNN-203ENST00000554117 AXIN2Q9Y2T1 843 aa15.02■□□□□ -0
PNN-203ENST00000554117 TNS2Q63HR2 1409 aa15.01□□□□□ -0.01
PNN-203ENST00000554117 ANKRD26Q9UPS8 1709 aa15□□□□□ -0.01
PNN-203ENST00000554117 USP47Q96K76 1375 aa15□□□□□ -0.01
PNN-203ENST00000554117 MYOM1P52179 1685 aa15□□□□□ -0.01
PNN-203ENST00000554117 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
PNN-203ENST00000554117 DCAF8L1A6NGE4 600 aa14.99□□□□□ -0.01
PNN-203ENST00000554117 BCL11BQ9C0K0 894 aaPredicted RBP14.99□□□□□ -0.01
PNN-203ENST00000554117 TIMELESSQ9UNS1 1208 aa14.99□□□□□ -0.01
PNN-203ENST00000554117 DOT1LQ8TEK3 1739 aa14.99□□□□□ -0.01
PNN-203ENST00000554117 SMG6Q86US8 1419 aaKnown RBP14.99□□□□□ -0.01
PNN-203ENST00000554117 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
PNN-203ENST00000554117 ERBB3P21860 1342 aa14.98□□□□□ -0.01
PNN-203ENST00000554117 PLSCR1O15162 318 aa14.98□□□□□ -0.01
PNN-203ENST00000554117 IL2RBP14784 551 aa14.98□□□□□ -0.01
PNN-203ENST00000554117 AMPHP49418 695 aa14.98□□□□□ -0.01
PNN-203ENST00000554117 ANKRD24Q8TF21 1146 aa14.98□□□□□ -0.01
PNN-203ENST00000554117 PPP1R1BQ9UD71 204 aaPredicted RBP14.98□□□□□ -0.01
PNN-203ENST00000554117 PCGF6Q9BYE7 350 aa14.97□□□□□ -0.01
PNN-203ENST00000554117 BCL9O00512 1426 aa14.97□□□□□ -0.01
PNN-203ENST00000554117 QSER1Q2KHR3 1735 aa14.97□□□□□ -0.01
PNN-203ENST00000554117 CASZ1Q86V15 1759 aa14.96□□□□□ -0.02
PNN-203ENST00000554117 SHANK3Q9BYB0 1731 aa14.95□□□□□ -0.02
PNN-203ENST00000554117 TESK2Q96S53 571 aa14.95□□□□□ -0.02
PNN-203ENST00000554117 MARCH10Q8NA82 808 aaPredicted RBP14.94□□□□□ -0.02
PNN-203ENST00000554117 IP6K1Q92551 441 aa14.94□□□□□ -0.02
PNN-203ENST00000554117 LTV1Q96GA3 475 aaPredicted RBP14.94□□□□□ -0.02
PNN-203ENST00000554117 SPON1Q9HCB6 807 aa14.93□□□□□ -0.02
PNN-203ENST00000554117 STK32BQ9NY57 414 aa14.93□□□□□ -0.02
PNN-203ENST00000554117 ITGB4P16144 1822 aa14.93□□□□□ -0.02
PNN-203ENST00000554117 RTL1A6NKG5 1358 aa14.93□□□□□ -0.02
PNN-203ENST00000554117 CHD4Q14839 1912 aa14.93□□□□□ -0.02
PNN-203ENST00000554117 LY75O60449 1722 aa14.92□□□□□ -0.02
PNN-203ENST00000554117 KCNQ2O43526 872 aa14.89□□□□□ -0.03
PNN-203ENST00000554117 HOXC9P31274 260 aa14.89□□□□□ -0.03
PNN-203ENST00000554117 ACSBG1Q96GR2 724 aa14.89□□□□□ -0.03
PNN-203ENST00000554117 TUBGCP6Q96RT7 1819 aa14.89□□□□□ -0.03
PNN-203ENST00000554117 TAF1LQ8IZX4 1826 aa14.88□□□□□ -0.03
PNN-203ENST00000554117 HMGB2P26583 209 aaKnown RBP14.88□□□□□ -0.03
PNN-203ENST00000554117 TXNRD1Q16881 649 aa14.88□□□□□ -0.03
PNN-203ENST00000554117 DDX54Q8TDD1 881 aaKnown RBP14.88□□□□□ -0.03
PNN-203ENST00000554117 POLR3GLQ9BT43 218 aa14.88□□□□□ -0.03
PNN-203ENST00000554117 MAP3K19Q56UN5 1328 aa14.88□□□□□ -0.03
PNN-203ENST00000554117 KIF24Q5T7B8 1368 aa14.87□□□□□ -0.03
PNN-203ENST00000554117 CCER1Q8TC90 406 aaPredicted RBP14.87□□□□□ -0.03
PNN-203ENST00000554117 RAPGEF4Q8WZA2 1011 aa14.87□□□□□ -0.03
PNN-203ENST00000554117 GGNBP2Q9H3C7 697 aa14.87□□□□□ -0.03
PNN-203ENST00000554117 CGNL1Q0VF96 1302 aa14.87□□□□□ -0.03
PNN-203ENST00000554117 SYTL4Q96C24 671 aaPredicted RBP14.86□□□□□ -0.03
PNN-203ENST00000554117 VIRMAQ69YN4 1812 aaKnown RBP14.86□□□□□ -0.03
PNN-203ENST00000554117 C5P01031 1676 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms