RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 PUS7Q96PZ0 661 aaKnown RBP28.87■■■□□ 2.21
HIF1A-206ENST00000553999 POLR3GLQ9BT43 218 aa28.87■■■□□ 2.21
HIF1A-206ENST00000553999 RGPD5Q99666 1765 aa28.87■■■□□ 2.21
HIF1A-206ENST00000553999 USP31Q70CQ4 1352 aa28.86■■■□□ 2.21
HIF1A-206ENST00000553999 CCDC125Q86Z20 511 aa28.85■■■□□ 2.21
HIF1A-206ENST00000553999 NINLQ9Y2I6 1382 aa28.85■■■□□ 2.21
HIF1A-206ENST00000553999 BARGINQ6ZT62 677 aa28.84■■■□□ 2.21
HIF1A-206ENST00000553999 PDE3BQ13370 1112 aa28.82■■■□□ 2.2
HIF1A-206ENST00000553999 OVOS2A0A0J9YW53 1432 aa28.81■■■□□ 2.2
HIF1A-206ENST00000553999 OVOS2Q6IE36 1432 aa28.81■■■□□ 2.2
HIF1A-206ENST00000553999 ANKRD36BQ8N2N9 1353 aa28.81■■■□□ 2.2
HIF1A-206ENST00000553999 WDR17Q8IZU2 1322 aa28.81■■■□□ 2.2
HIF1A-206ENST00000553999 SLC24A1O60721 1099 aa28.81■■■□□ 2.2
HIF1A-206ENST00000553999 USP54Q70EL1 1684 aa28.8■■■□□ 2.2
HIF1A-206ENST00000553999 LTN1O94822 1766 aa28.8■■■□□ 2.2
HIF1A-206ENST00000553999 FBLN1P23142 703 aa28.79■■■□□ 2.2
HIF1A-206ENST00000553999 TRIM37O94972 964 aa28.77■■■□□ 2.2
HIF1A-206ENST00000553999 COG3Q96JB2 828 aa28.77■■■□□ 2.2
HIF1A-206ENST00000553999 GGNBP2Q9H3C7 697 aa28.77■■■□□ 2.2
HIF1A-206ENST00000553999 THRAP3Q9Y2W1 955 aaKnown RBP28.77■■■□□ 2.2
HIF1A-206ENST00000553999 CDCA8Q53HL2 280 aa28.76■■■□□ 2.19
HIF1A-206ENST00000553999 MYOM1P52179 1685 aa28.75■■■□□ 2.19
HIF1A-206ENST00000553999 HSPA5P11021 654 aaKnown RBP28.75■■■□□ 2.19
HIF1A-206ENST00000553999 BAG6P46379 1132 aa28.75■■■□□ 2.19
HIF1A-206ENST00000553999 LRRC37A3O60309 1634 aa28.74■■■□□ 2.19
HIF1A-206ENST00000553999 EN1Q05925 392 aaPredicted RBP28.74■■■□□ 2.19
HIF1A-206ENST00000553999 LTV1Q96GA3 475 aaPredicted RBP28.74■■■□□ 2.19
HIF1A-206ENST00000553999 RGPD1P0DJD0 1748 aa28.73■■■□□ 2.19
HIF1A-206ENST00000553999 FAM196AQ6ZSG2 479 aa28.73■■■□□ 2.19
HIF1A-206ENST00000553999 NLRP2Q9NX02 1062 aa28.73■■■□□ 2.19
HIF1A-206ENST00000553999 PARP4Q9UKK3 1724 aaKnown RBP28.73■■■□□ 2.19
HIF1A-206ENST00000553999 WNK3Q9BYP7 1800 aa28.71■■■□□ 2.19
HIF1A-206ENST00000553999 EIF4G2P78344 907 aaKnown RBP eCLIP28.71■■■□□ 2.19
HIF1A-206ENST00000553999 ANKRD24Q8TF21 1146 aa28.71■■■□□ 2.19
HIF1A-206ENST00000553999 TNS1Q9HBL0 1735 aaKnown RBP28.71■■■□□ 2.19
HIF1A-206ENST00000553999 DDB1Q16531 1140 aa28.7■■■□□ 2.18
HIF1A-206ENST00000553999 CARD10Q9BWT7 1032 aa28.7■■■□□ 2.18
HIF1A-206ENST00000553999 NSD3Q9BZ95 1437 aa28.69■■■□□ 2.18
HIF1A-206ENST00000553999 ABCC6O95255 1503 aa28.69■■■□□ 2.18
HIF1A-206ENST00000553999 ERBB3P21860 1342 aa28.69■■■□□ 2.18
HIF1A-206ENST00000553999 MAP3K19Q56UN5 1328 aa28.68■■■□□ 2.18
HIF1A-206ENST00000553999 FYB1O15117 783 aa28.67■■■□□ 2.18
HIF1A-206ENST00000553999 RRS1Q15050 365 aaKnown RBP28.67■■■□□ 2.18
HIF1A-206ENST00000553999 CARD14Q9BXL6 1004 aa28.67■■■□□ 2.18
HIF1A-206ENST00000553999 KIF20BQ96Q89 1820 aa28.66■■■□□ 2.18
HIF1A-206ENST00000553999 APBA3O96018 575 aa28.65■■■□□ 2.18
HIF1A-206ENST00000553999 AMPHP49418 695 aa28.65■■■□□ 2.18
HIF1A-206ENST00000553999 EZH2Q15910 746 aaKnown RBP28.64■■■□□ 2.18
HIF1A-206ENST00000553999 CCDC7Q96M83 1385 aa28.63■■■□□ 2.17
HIF1A-206ENST00000553999 DISP2A7MBM2 1401 aa28.63■■■□□ 2.17
HIF1A-206ENST00000553999 OVOS2A0A0G2JMS6 1433 aa28.62■■■□□ 2.17
HIF1A-206ENST00000553999 PSDA5PKW4 1024 aaPredicted RBP28.62■■■□□ 2.17
HIF1A-206ENST00000553999 IP6K1Q92551 441 aa28.62■■■□□ 2.17
HIF1A-206ENST00000553999 HOXC9P31274 260 aa28.61■■■□□ 2.17
HIF1A-206ENST00000553999 MARCH10Q8NA82 808 aaPredicted RBP28.61■■■□□ 2.17
HIF1A-206ENST00000553999 PEAK1Q9H792 1746 aa28.58■■■□□ 2.17
HIF1A-206ENST00000553999 PTF1AQ7RTS3 328 aa28.58■■■□□ 2.17
HIF1A-206ENST00000553999 CDCA7Q9BWT1 371 aaPredicted RBP28.58■■■□□ 2.17
HIF1A-206ENST00000553999 EXOC5O00471 708 aa28.57■■■□□ 2.16
HIF1A-206ENST00000553999 TNS2Q63HR2 1409 aa28.55■■■□□ 2.16
HIF1A-206ENST00000553999 IL2RBP14784 551 aa28.55■■■□□ 2.16
HIF1A-206ENST00000553999 C11orf95C9JLR9 678 aaPredicted RBP28.54■■■□□ 2.16
HIF1A-206ENST00000553999 USHBP1Q8N6Y0 703 aa28.54■■■□□ 2.16
HIF1A-206ENST00000553999 CAMKK2Q96RR4 588 aa28.53■■■□□ 2.16
HIF1A-206ENST00000553999 PPM1GO15355 546 aaPredicted RBP28.52■■■□□ 2.16
HIF1A-206ENST00000553999 RGPD2P0DJD1 1756 aa28.52■■■□□ 2.16
HIF1A-206ENST00000553999 TNNT2P45379 298 aaPredicted RBP28.51■■■□□ 2.15
HIF1A-206ENST00000553999 R3HDM1Q15032 1099 aaKnown RBP28.51■■■□□ 2.15
HIF1A-206ENST00000553999 EMILIN1Q9Y6C2 1016 aa28.51■■■□□ 2.15
HIF1A-206ENST00000553999 ACSBG1Q96GR2 724 aa28.5■■■□□ 2.15
HIF1A-206ENST00000553999 RTL1A6NKG5 1358 aa28.5■■■□□ 2.15
HIF1A-206ENST00000553999 CGNL1Q0VF96 1302 aa28.49■■■□□ 2.15
HIF1A-206ENST00000553999 PANK3Q9H999 370 aa28.49■■■□□ 2.15
HIF1A-206ENST00000553999 SBF2Q86WG5 1849 aa28.48■■■□□ 2.15
HIF1A-206ENST00000553999 HSP90AB2PQ58FF8 381 aa28.48■■■□□ 2.15
HIF1A-206ENST00000553999 FAM208AQ9UK61 1670 aaKnown RBP28.48■■■□□ 2.15
HIF1A-206ENST00000553999 DDX54Q8TDD1 881 aaKnown RBP28.46■■■□□ 2.15
HIF1A-206ENST00000553999 KCNQ2O43526 872 aa28.45■■■□□ 2.14
HIF1A-206ENST00000553999 SMG6Q86US8 1419 aaKnown RBP28.44■■■□□ 2.14
HIF1A-206ENST00000553999 NBPF6Q5VWK0 638 aa28.44■■■□□ 2.14
HIF1A-206ENST00000553999 NBPF4Q96M43 638 aa28.44■■■□□ 2.14
HIF1A-206ENST00000553999 FLT4P35916 1363 aa28.44■■■□□ 2.14
HIF1A-206ENST00000553999 NUP188Q5SRE5 1749 aa28.43■■■□□ 2.14
HIF1A-206ENST00000553999 RREB1Q92766 1687 aa28.43■■■□□ 2.14
HIF1A-206ENST00000553999 BCL11BQ9C0K0 894 aaPredicted RBP28.43■■■□□ 2.14
HIF1A-206ENST00000553999 MEGF6O75095 1541 aa28.43■■■□□ 2.14
HIF1A-206ENST00000553999 PARD3Q8TEW0 1356 aa28.4■■■□□ 2.14
HIF1A-206ENST00000553999 KIF7Q2M1P5 1343 aa28.4■■■□□ 2.14
HIF1A-206ENST00000553999 INSRP06213 1382 aa28.39■■■□□ 2.14
HIF1A-206ENST00000553999 BCL9O00512 1426 aa28.36■■■□□ 2.13
HIF1A-206ENST00000553999 ANKRD26Q9UPS8 1709 aa28.36■■■□□ 2.13
HIF1A-206ENST00000553999 NHSQ6T4R5 1651 aa28.35■■■□□ 2.13
HIF1A-206ENST00000553999 RAPGEF4Q8WZA2 1011 aa28.34■■■□□ 2.13
HIF1A-206ENST00000553999 SYTL4Q96C24 671 aaPredicted RBP28.34■■■□□ 2.13
HIF1A-206ENST00000553999 CNGB1Q14028 1251 aaPredicted RBP28.33■■■□□ 2.13
HIF1A-206ENST00000553999 NBPF14Q5TI25 921 aa28.33■■■□□ 2.13
HIF1A-206ENST00000553999 ZCRB1Q8TBF4 217 aaKnown RBP28.33■■■□□ 2.13
HIF1A-206ENST00000553999 POLKQ9UBT6 870 aa28.33■■■□□ 2.13
HIF1A-206ENST00000553999 MAP2P11137 1827 aaKnown RBP28.32■■■□□ 2.12
HIF1A-206ENST00000553999 ANO8Q9HCE9 1232 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms