RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 SBNO2Q9Y2G9 1366 aa24.54■■□□□ 1.52
SEC23A-206ENST00000553970 ARHGEF25Q86VW2 580 aa24.52■■□□□ 1.52
SEC23A-206ENST00000553970 ABCC6O95255 1503 aa24.51■■□□□ 1.51
SEC23A-206ENST00000553970 NUP188Q5SRE5 1749 aa24.51■■□□□ 1.51
SEC23A-206ENST00000553970 KTN1Q86UP2 1357 aaKnown RBP24.51■■□□□ 1.51
SEC23A-206ENST00000553970 LRRC37A3O60309 1634 aa24.5■■□□□ 1.51
SEC23A-206ENST00000553970 RGPD3A6NKT7 1758 aaPredicted RBP24.5■■□□□ 1.51
SEC23A-206ENST00000553970 COL18A1P39060 1754 aa24.5■■□□□ 1.51
SEC23A-206ENST00000553970 RGPD4Q7Z3J3 1758 aa24.5■■□□□ 1.51
SEC23A-206ENST00000553970 CSB-PGBD3P0DP91 1061 aa24.49■■□□□ 1.51
SEC23A-206ENST00000553970 PLSCR1O15162 318 aa24.48■■□□□ 1.51
SEC23A-206ENST00000553970 CARD10Q9BWT7 1032 aa24.48■■□□□ 1.51
SEC23A-206ENST00000553970 PEAK1Q9H792 1746 aa24.47■■□□□ 1.51
SEC23A-206ENST00000553970 BCL9O00512 1426 aa24.47■■□□□ 1.51
SEC23A-206ENST00000553970 WNK3Q9BYP7 1800 aa24.47■■□□□ 1.51
SEC23A-206ENST00000553970 CCDC7Q96M83 1385 aa24.46■■□□□ 1.51
SEC23A-206ENST00000553970 CARD11Q9BXL7 1154 aa24.46■■□□□ 1.51
SEC23A-206ENST00000553970 BCL11BQ9C0K0 894 aaPredicted RBP24.46■■□□□ 1.51
SEC23A-206ENST00000553970 AXIN2Q9Y2T1 843 aa24.46■■□□□ 1.51
SEC23A-206ENST00000553970 MON2Q7Z3U7 1717 aa24.44■■□□□ 1.5
SEC23A-206ENST00000553970 SBF2Q86WG5 1849 aa24.43■■□□□ 1.5
SEC23A-206ENST00000553970 SOX12O15370 315 aa24.43■■□□□ 1.5
SEC23A-206ENST00000553970 HDGFL2Q7Z4V5 671 aaPredicted RBP24.43■■□□□ 1.5
SEC23A-206ENST00000553970 NFAT5O94916 1531 aa24.43■■□□□ 1.5
SEC23A-206ENST00000553970 SPON1Q9HCB6 807 aa24.42■■□□□ 1.5
SEC23A-206ENST00000553970 USP31Q70CQ4 1352 aa24.42■■□□□ 1.5
SEC23A-206ENST00000553970 EXOC5O00471 708 aa24.41■■□□□ 1.5
SEC23A-206ENST00000553970 TONSLQ96HA7 1378 aa24.41■■□□□ 1.5
SEC23A-206ENST00000553970 SLC24A1O60721 1099 aa24.4■■□□□ 1.5
SEC23A-206ENST00000553970 PPP1R1BQ9UD71 204 aaPredicted RBP24.4■■□□□ 1.5
SEC23A-206ENST00000553970 USP54Q70EL1 1684 aa24.4■■□□□ 1.5
SEC23A-206ENST00000553970 PUS7Q96PZ0 661 aaKnown RBP24.39■■□□□ 1.49
SEC23A-206ENST00000553970 TERF2IPQ9NYB0 399 aa24.39■■□□□ 1.49
SEC23A-206ENST00000553970 RGPD5Q99666 1765 aa24.39■■□□□ 1.49
SEC23A-206ENST00000553970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.38■■□□□ 1.49
SEC23A-206ENST00000553970 MARCH10Q8NA82 808 aaPredicted RBP24.38■■□□□ 1.49
SEC23A-206ENST00000553970 KCNQ2O43526 872 aa24.37■■□□□ 1.49
SEC23A-206ENST00000553970 TMC1Q8TDI8 760 aa24.37■■□□□ 1.49
SEC23A-206ENST00000553970 TNS2Q63HR2 1409 aa24.36■■□□□ 1.49
SEC23A-206ENST00000553970 EDC4Q6P2E9 1401 aaKnown RBP24.36■■□□□ 1.49
SEC23A-206ENST00000553970 DCAF8L1A6NGE4 600 aa24.36■■□□□ 1.49
SEC23A-206ENST00000553970 ERBB3P21860 1342 aa24.35■■□□□ 1.49
SEC23A-206ENST00000553970 NINLQ9Y2I6 1382 aa24.34■■□□□ 1.49
SEC23A-206ENST00000553970 CD163L1Q9NR16 1453 aa24.32■■□□□ 1.48
SEC23A-206ENST00000553970 NME9Q86XW9 330 aa24.31■■□□□ 1.48
SEC23A-206ENST00000553970 NLRP2Q9NX02 1062 aa24.31■■□□□ 1.48
SEC23A-206ENST00000553970 LTN1O94822 1766 aa24.3■■□□□ 1.48
SEC23A-206ENST00000553970 IL2RBP14784 551 aa24.29■■□□□ 1.48
SEC23A-206ENST00000553970 SLC12A5Q9H2X9 1139 aa24.28■■□□□ 1.48
SEC23A-206ENST00000553970 STK32BQ9NY57 414 aa24.28■■□□□ 1.48
SEC23A-206ENST00000553970 A0A1W2PP64 1363 aa24.28■■□□□ 1.48
SEC23A-206ENST00000553970 TXNRD1Q16881 649 aa24.27■■□□□ 1.48
SEC23A-206ENST00000553970 ANO8Q9HCE9 1232 aaPredicted RBP24.27■■□□□ 1.48
SEC23A-206ENST00000553970 ANKRD24Q8TF21 1146 aa24.26■■□□□ 1.47
SEC23A-206ENST00000553970 NHSQ6T4R5 1651 aa24.26■■□□□ 1.47
SEC23A-206ENST00000553970 CASZ1Q86V15 1759 aa24.24■■□□□ 1.47
SEC23A-206ENST00000553970 PTF1AQ7RTS3 328 aa24.24■■□□□ 1.47
SEC23A-206ENST00000553970 PROM2Q8N271 834 aa24.24■■□□□ 1.47
SEC23A-206ENST00000553970 FAM208AQ9UK61 1670 aaKnown RBP24.24■■□□□ 1.47
SEC23A-206ENST00000553970 SLC15A2Q16348 729 aa24.22■■□□□ 1.47
SEC23A-206ENST00000553970 COG3Q96JB2 828 aa24.22■■□□□ 1.47
SEC23A-206ENST00000553970 IP6K1Q92551 441 aa24.21■■□□□ 1.47
SEC23A-206ENST00000553970 YY1P25490 414 aa24.19■■□□□ 1.46
SEC23A-206ENST00000553970 TESK2Q96S53 571 aa24.18■■□□□ 1.46
SEC23A-206ENST00000553970 ST20-MTHFSA0A0A6YYL1 179 aa24.17■■□□□ 1.46
SEC23A-206ENST00000553970 ACSBG1Q96GR2 724 aa24.17■■□□□ 1.46
SEC23A-206ENST00000553970 MTFR1LQ9H019 292 aa24.17■■□□□ 1.46
SEC23A-206ENST00000553970 ZBTB7AO95365 584 aa24.16■■□□□ 1.46
SEC23A-206ENST00000553970 ANKRD36BQ8N2N9 1353 aa24.16■■□□□ 1.46
SEC23A-206ENST00000553970 KAT6BQ8WYB5 2073 aa24.15■■□□□ 1.46
SEC23A-206ENST00000553970 AMPHP49418 695 aa24.14■■□□□ 1.45
SEC23A-206ENST00000553970 BTAF1O14981 1849 aa24.13■■□□□ 1.45
SEC23A-206ENST00000553970 TMF1P82094 1093 aa24.13■■□□□ 1.45
SEC23A-206ENST00000553970 RTL1A6NKG5 1358 aa24.13■■□□□ 1.45
SEC23A-206ENST00000553970 CDCA8Q53HL2 280 aa24.12■■□□□ 1.45
SEC23A-206ENST00000553970 SLC27A3Q5K4L6 730 aa24.12■■□□□ 1.45
SEC23A-206ENST00000553970 PTGER2P43116 358 aa24.11■■□□□ 1.45
SEC23A-206ENST00000553970 LTV1Q96GA3 475 aaPredicted RBP24.11■■□□□ 1.45
SEC23A-206ENST00000553970 ATF5Q9Y2D1 282 aaPredicted RBP24.11■■□□□ 1.45
SEC23A-206ENST00000553970 MAP3K19Q56UN5 1328 aa24.1■■□□□ 1.45
SEC23A-206ENST00000553970 HOXC9P31274 260 aa24.1■■□□□ 1.45
SEC23A-206ENST00000553970 DDX54Q8TDD1 881 aaKnown RBP24.1■■□□□ 1.45
SEC23A-206ENST00000553970 PDGFDQ9GZP0 370 aaPredicted RBP24.1■■□□□ 1.45
SEC23A-206ENST00000553970 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
SEC23A-206ENST00000553970 MYOM1P52179 1685 aa24.09■■□□□ 1.45
SEC23A-206ENST00000553970 PAPPAQ13219 1627 aa24.09■■□□□ 1.45
SEC23A-206ENST00000553970 CGNL1Q0VF96 1302 aa24.09■■□□□ 1.45
SEC23A-206ENST00000553970 HMGB2P26583 209 aaKnown RBP24.07■■□□□ 1.44
SEC23A-206ENST00000553970 USP47Q96K76 1375 aa24.06■■□□□ 1.44
SEC23A-206ENST00000553970 ZCRB1Q8TBF4 217 aaKnown RBP24.05■■□□□ 1.44
SEC23A-206ENST00000553970 SLC16A10Q8TF71 515 aa24.05■■□□□ 1.44
SEC23A-206ENST00000553970 TRIM26Q12899 539 aaPredicted RBP24.04■■□□□ 1.44
SEC23A-206ENST00000553970 SYTL4Q96C24 671 aaPredicted RBP24.04■■□□□ 1.44
SEC23A-206ENST00000553970 SYT17Q9BSW7 474 aa24.04■■□□□ 1.44
SEC23A-206ENST00000553970 FHDC1Q9C0D6 1143 aaPredicted RBP24.04■■□□□ 1.44
SEC23A-206ENST00000553970 ARXQ96QS3 562 aa24.03■■□□□ 1.44
SEC23A-206ENST00000553970 KIF24Q5T7B8 1368 aa24.03■■□□□ 1.44
SEC23A-206ENST00000553970 MAP3K5Q99683 1374 aa24.03■■□□□ 1.44
SEC23A-206ENST00000553970 SGIP1Q9BQI5 828 aa24.02■■□□□ 1.44
SEC23A-206ENST00000553970 QSER1Q2KHR3 1735 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms