RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 COL18A1P39060 1754 aa14.39□□□□□ -0.11
PABPN1-203ENST00000553960 HOXC9P31274 260 aa14.39□□□□□ -0.11
PABPN1-203ENST00000553960 RRS1Q15050 365 aaKnown RBP14.39□□□□□ -0.11
PABPN1-203ENST00000553960 WDR63Q8IWG1 891 aa14.39□□□□□ -0.11
PABPN1-203ENST00000553960 IL16Q14005 1332 aa14.39□□□□□ -0.11
PABPN1-203ENST00000553960 U2AF1L5P0DN76 240 aaPredicted RBP14.38□□□□□ -0.11
PABPN1-203ENST00000553960 U2AF1Q01081 240 aaKnown RBP eCLIP14.38□□□□□ -0.11
PABPN1-203ENST00000553960 EIF4A2Q14240 407 aaKnown RBP14.38□□□□□ -0.11
PABPN1-203ENST00000553960 FAM208AQ9UK61 1670 aaKnown RBP14.38□□□□□ -0.11
PABPN1-203ENST00000553960 LMO7Q8WWI1 1683 aa14.37□□□□□ -0.11
PABPN1-203ENST00000553960 PAK3O75914 559 aaPredicted RBP14.37□□□□□ -0.11
PABPN1-203ENST00000553960 TCP11L2Q8N4U5 519 aa14.37□□□□□ -0.11
PABPN1-203ENST00000553960 RNF123Q5XPI4 1314 aa14.37□□□□□ -0.11
PABPN1-203ENST00000553960 APAF1O14727 1248 aa14.36□□□□□ -0.11
PABPN1-203ENST00000553960 HSP90AB2PQ58FF8 381 aa14.36□□□□□ -0.11
PABPN1-203ENST00000553960 ROBO1Q9Y6N7 1651 aa14.36□□□□□ -0.11
PABPN1-203ENST00000553960 FBLN1P23142 703 aa14.35□□□□□ -0.11
PABPN1-203ENST00000553960 WWC1Q8IX03 1113 aa14.35□□□□□ -0.11
PABPN1-203ENST00000553960 ABCA3Q99758 1704 aa14.35□□□□□ -0.11
PABPN1-203ENST00000553960 TMPOP42166 694 aaKnown RBP14.34□□□□□ -0.11
PABPN1-203ENST00000553960 AMPHP49418 695 aa14.34□□□□□ -0.11
PABPN1-203ENST00000553960 GOLGA2Q08379 1002 aa14.34□□□□□ -0.11
PABPN1-203ENST00000553960 LRRC59Q96AG4 307 aaKnown RBP14.34□□□□□ -0.11
PABPN1-203ENST00000553960 E9PSI1 815 aa14.33□□□□□ -0.12
PABPN1-203ENST00000553960 HTATSF1O43719 755 aaKnown RBP14.33□□□□□ -0.12
PABPN1-203ENST00000553960 TOM1O60784 492 aa14.33□□□□□ -0.12
PABPN1-203ENST00000553960 SLFN5Q08AF3 891 aa14.33□□□□□ -0.12
PABPN1-203ENST00000553960 CT47B1P0C2W7 299 aaPredicted RBP14.32□□□□□ -0.12
PABPN1-203ENST00000553960 COL16A1Q07092 1604 aaPredicted RBP14.31□□□□□ -0.12
PABPN1-203ENST00000553960 U2SURPO15042 1029 aaKnown RBP14.31□□□□□ -0.12
PABPN1-203ENST00000553960 NEFMP07197 916 aa14.31□□□□□ -0.12
PABPN1-203ENST00000553960 LMOD3Q0VAK6 560 aa14.31□□□□□ -0.12
PABPN1-203ENST00000553960 NFE2L2Q16236 605 aa14.31□□□□□ -0.12
PABPN1-203ENST00000553960 DUSP27Q5VZP5 1158 aa14.31□□□□□ -0.12
PABPN1-203ENST00000553960 ERICH6BQ5W0A0 696 aa14.31□□□□□ -0.12
PABPN1-203ENST00000553960 EYA1Q99502 592 aa14.31□□□□□ -0.12
PABPN1-203ENST00000553960 MAPK8IP3Q9UPT6 1336 aa14.31□□□□□ -0.12
PABPN1-203ENST00000553960 PRKAR2BP31323 418 aa14.3□□□□□ -0.12
PABPN1-203ENST00000553960 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
PABPN1-203ENST00000553960 PPM1GO15355 546 aaPredicted RBP14.29□□□□□ -0.12
PABPN1-203ENST00000553960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.29□□□□□ -0.122e-30■■□□□ 14
PABPN1-203ENST00000553960 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
PABPN1-203ENST00000553960 ERBB3P21860 1342 aa14.29□□□□□ -0.12
PABPN1-203ENST00000553960 XPCQ01831 940 aaPredicted RBP14.28□□□□□ -0.12
PABPN1-203ENST00000553960 DLG5Q8TDM6 1919 aa14.28□□□□□ -0.12
PABPN1-203ENST00000553960 OVOS2A0A0G2JMS6 1433 aa14.27□□□□□ -0.12
PABPN1-203ENST00000553960 NUTM2GQ5VZR2 741 aa14.27□□□□□ -0.13
PABPN1-203ENST00000553960 CCDC146Q8IYE0 955 aa14.27□□□□□ -0.13
PABPN1-203ENST00000553960 BABAM1Q9NWV8 329 aa14.27□□□□□ -0.13
PABPN1-203ENST00000553960 SULT6B1Q6IMI4 303 aa14.26□□□□□ -0.13
PABPN1-203ENST00000553960 GAS2L2Q8NHY3 880 aa14.26□□□□□ -0.13
PABPN1-203ENST00000553960 ZNF428Q96B54 188 aa14.26□□□□□ -0.13
PABPN1-203ENST00000553960 PHACTR3Q96KR7 559 aa14.26□□□□□ -0.13
PABPN1-203ENST00000553960 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
PABPN1-203ENST00000553960 DDX17Q92841 729 aaKnown RBP14.25□□□□□ -0.13
PABPN1-203ENST00000553960 MYH16Q9H6N6 1097 aa14.25□□□□□ -0.13
PABPN1-203ENST00000553960 ADAMTS7Q9UKP4 1686 aa14.25□□□□□ -0.13
PABPN1-203ENST00000553960 LRRC37A3O60309 1634 aa14.24□□□□□ -0.13
PABPN1-203ENST00000553960 RIPK4P57078 832 aa14.24□□□□□ -0.13
PABPN1-203ENST00000553960 AMOTQ4VCS5 1084 aa14.24□□□□□ -0.13
PABPN1-203ENST00000553960 COL14A1Q05707 1796 aaKnown RBP14.24□□□□□ -0.13
PABPN1-203ENST00000553960 RGPD5Q99666 1765 aa14.24□□□□□ -0.13
PABPN1-203ENST00000553960 PHLPP1O60346 1717 aa14.24□□□□□ -0.13
PABPN1-203ENST00000553960 KIAA0232Q92628 1395 aa14.23□□□□□ -0.13
PABPN1-203ENST00000553960 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
PABPN1-203ENST00000553960 AXIN2Q9Y2T1 843 aa14.23□□□□□ -0.13
PABPN1-203ENST00000553960 HMOX1P09601 288 aa14.22□□□□□ -0.13
PABPN1-203ENST00000553960 NBPF6Q5VWK0 638 aa14.22□□□□□ -0.13
PABPN1-203ENST00000553960 AEBP1Q8IUX7 1158 aa14.22□□□□□ -0.13
PABPN1-203ENST00000553960 ANKRD24Q8TF21 1146 aa14.22□□□□□ -0.13
PABPN1-203ENST00000553960 CDCA7LQ96GN5 454 aa14.22□□□□□ -0.13
PABPN1-203ENST00000553960 NBPF4Q96M43 638 aa14.22□□□□□ -0.13
PABPN1-203ENST00000553960 IFT57Q9NWB7 429 aa14.22□□□□□ -0.13
PABPN1-203ENST00000553960 SOS1Q07889 1333 aaPredicted RBP14.21□□□□□ -0.13
PABPN1-203ENST00000553960 WDR17Q8IZU2 1322 aa14.21□□□□□ -0.13
PABPN1-203ENST00000553960 COL5A2P05997 1499 aaPredicted RBP14.21□□□□□ -0.13
PABPN1-203ENST00000553960 BRPF1P55201 1214 aaPredicted RBP14.21□□□□□ -0.13
PABPN1-203ENST00000553960 RGPD2P0DJD1 1756 aa14.21□□□□□ -0.13
PABPN1-203ENST00000553960 PKD1L3Q7Z443 1732 aa14.21□□□□□ -0.14
PABPN1-203ENST00000553960 CEMIPQ8WUJ3 1361 aa14.21□□□□□ -0.14
PABPN1-203ENST00000553960 GNAI1P63096 354 aa14.2□□□□□ -0.14
PABPN1-203ENST00000553960 LMOD2Q6P5Q4 547 aa14.2□□□□□ -0.14
PABPN1-203ENST00000553960 CFAP44Q96MT7 982 aa14.2□□□□□ -0.14
PABPN1-203ENST00000553960 SPINK5Q9NQ38 1064 aaPredicted RBP14.2□□□□□ -0.14
PABPN1-203ENST00000553960 NWD2Q9ULI1 1742 aa14.19□□□□□ -0.14
PABPN1-203ENST00000553960 RCAN3Q9UKA8 241 aa14.19□□□□□ -0.14
PABPN1-203ENST00000553960 CRB1P82279 1406 aa14.18□□□□□ -0.14
PABPN1-203ENST00000553960 CHL1O00533 1208 aa14.18□□□□□ -0.14
PABPN1-203ENST00000553960 SOX12O15370 315 aa14.18□□□□□ -0.14
PABPN1-203ENST00000553960 ZC3H6P61129 1189 aaKnown RBP14.18□□□□□ -0.14
PABPN1-203ENST00000553960 CARD10Q9BWT7 1032 aa14.18□□□□□ -0.14
PABPN1-203ENST00000553960 PRDM11Q9NQV5 511 aa14.18□□□□□ -0.14
PABPN1-203ENST00000553960 HAP1P54257 671 aaPredicted RBP14.17□□□□□ -0.14
PABPN1-203ENST00000553960 MTHFSDQ2M296 383 aaKnown RBP14.17□□□□□ -0.14
PABPN1-203ENST00000553960 PLEKHO1Q53GL0 409 aaPredicted RBP14.17□□□□□ -0.14
PABPN1-203ENST00000553960 MAP3K5Q99683 1374 aa14.17□□□□□ -0.14
PABPN1-203ENST00000553960 JCADQ9P266 1359 aa14.17□□□□□ -0.14
PABPN1-203ENST00000553960 GNAT3A8MTJ3 354 aa14.16□□□□□ -0.14
PABPN1-203ENST00000553960 CABLES1Q8TDN4 633 aa14.16□□□□□ -0.14
PABPN1-203ENST00000553960 RRP7AQ9Y3A4 280 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms