RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 DIAPH1O60610 1272 aaKnown RBP13.06□□□□□ -0.32
CHD8-204ENST00000553622 HOXC9P31274 260 aa13.06□□□□□ -0.32
CHD8-204ENST00000553622 PRDM11Q9NQV5 511 aa13.06□□□□□ -0.32
CHD8-204ENST00000553622 COL18A1P39060 1754 aa13.06□□□□□ -0.32
CHD8-204ENST00000553622 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
CHD8-204ENST00000553622 ADAMTS2O95450 1211 aa13.05□□□□□ -0.32
CHD8-204ENST00000553622 HSP90AB2PQ58FF8 381 aa13.05□□□□□ -0.32
CHD8-204ENST00000553622 ARHGEF25Q86VW2 580 aa13.05□□□□□ -0.32
CHD8-204ENST00000553622 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
CHD8-204ENST00000553622 COL14A1Q05707 1796 aaKnown RBP13.04□□□□□ -0.32
CHD8-204ENST00000553622 IP6K1Q92551 441 aa13.04□□□□□ -0.32
CHD8-204ENST00000553622 YTHDC1Q96MU7 727 aaKnown RBP13.04□□□□□ -0.32
CHD8-204ENST00000553622 PLCH1Q4KWH8 1693 aa13.04□□□□□ -0.32
CHD8-204ENST00000553622 U2AF1L5P0DN76 240 aaPredicted RBP13.03□□□□□ -0.32
CHD8-204ENST00000553622 U2AF1Q01081 240 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHD8-204ENST00000553622 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
CHD8-204ENST00000553622 CPDO75976 1380 aa13.03□□□□□ -0.32
CHD8-204ENST00000553622 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
CHD8-204ENST00000553622 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
CHD8-204ENST00000553622 EIF4A2Q14240 407 aaKnown RBP13.02□□□□□ -0.33
CHD8-204ENST00000553622 INSRP06213 1382 aa13.02□□□□□ -0.33
CHD8-204ENST00000553622 CSB-PGBD3P0DP91 1061 aa13.01□□□□□ -0.33
CHD8-204ENST00000553622 BLMP54132 1417 aaPredicted RBP13.01□□□□□ -0.33
CHD8-204ENST00000553622 ABCC6O95255 1503 aa13.01□□□□□ -0.33
CHD8-204ENST00000553622 LMO7Q8WWI1 1683 aa13.01□□□□□ -0.33
CHD8-204ENST00000553622 RGPD1P0DJD0 1748 aa13.01□□□□□ -0.33
CHD8-204ENST00000553622 IL13P35225 146 aa13□□□□□ -0.33
CHD8-204ENST00000553622 MEX3CQ5U5Q3 659 aaKnown RBP13□□□□□ -0.33
CHD8-204ENST00000553622 ANKRD24Q8TF21 1146 aa13□□□□□ -0.33
CHD8-204ENST00000553622 FBXO41Q8TF61 875 aa13□□□□□ -0.33
CHD8-204ENST00000553622 ADAMTS8Q9UP79 889 aa13□□□□□ -0.33
CHD8-204ENST00000553622 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
CHD8-204ENST00000553622 CAMTA1Q9Y6Y1 1673 aa12.99□□□□□ -0.33
CHD8-204ENST00000553622 SPATA31A6Q5VVP1 1343 aa12.99□□□□□ -0.33
CHD8-204ENST00000553622 SENP3-EIF4A1A0A087X0R7 540 aa12.99□□□□□ -0.33
CHD8-204ENST00000553622 FAM83GA6ND36 823 aa12.99□□□□□ -0.33
CHD8-204ENST00000553622 HMOX1P09601 288 aa12.99□□□□□ -0.33
CHD8-204ENST00000553622 EVA1CP58658 441 aa12.99□□□□□ -0.33
CHD8-204ENST00000553622 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
CHD8-204ENST00000553622 STRN4Q9NRL3 753 aa12.99□□□□□ -0.33
CHD8-204ENST00000553622 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
CHD8-204ENST00000553622 NRAPQ86VF7 1730 aa12.97□□□□□ -0.33
CHD8-204ENST00000553622 SULT6B1Q6IMI4 303 aa12.97□□□□□ -0.33
CHD8-204ENST00000553622 USHBP1Q8N6Y0 703 aa12.97□□□□□ -0.33
CHD8-204ENST00000553622 C8orf37Q96NL8 207 aa12.97□□□□□ -0.33
CHD8-204ENST00000553622 NLRP2Q9NX02 1062 aa12.97□□□□□ -0.33
CHD8-204ENST00000553622 BTG4Q9NY30 223 aa12.97□□□□□ -0.33
CHD8-204ENST00000553622 LRP6O75581 1613 aa12.97□□□□□ -0.33
CHD8-204ENST00000553622 DLG5Q8TDM6 1919 aa12.97□□□□□ -0.33
CHD8-204ENST00000553622 NEFMP07197 916 aa12.96□□□□□ -0.33
CHD8-204ENST00000553622 NGLY1Q96IV0 654 aa12.96□□□□□ -0.33
CHD8-204ENST00000553622 EYA1Q99502 592 aa12.96□□□□□ -0.33
CHD8-204ENST00000553622 COL5A2P05997 1499 aaPredicted RBP12.96□□□□□ -0.34
CHD8-204ENST00000553622 ERBB3P21860 1342 aa12.95□□□□□ -0.34
CHD8-204ENST00000553622 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHD8-204ENST00000553622 TOM1L2Q6ZVM7 507 aa12.95□□□□□ -0.34
CHD8-204ENST00000553622 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
CHD8-204ENST00000553622 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
CHD8-204ENST00000553622 PRKAR2BP31323 418 aa12.94□□□□□ -0.34
CHD8-204ENST00000553622 NBPF6Q5VWK0 638 aa12.94□□□□□ -0.34
CHD8-204ENST00000553622 NBPF4Q96M43 638 aa12.94□□□□□ -0.34
CHD8-204ENST00000553622 PNNQ9H307 717 aaKnown RBP12.94□□□□□ -0.34
CHD8-204ENST00000553622 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
CHD8-204ENST00000553622 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
CHD8-204ENST00000553622 LARP1Q6PKG0 1096 aaKnown RBP12.93□□□□□ -0.34
CHD8-204ENST00000553622 RUNDC1Q96C34 613 aa12.93□□□□□ -0.34
CHD8-204ENST00000553622 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
CHD8-204ENST00000553622 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
CHD8-204ENST00000553622 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
CHD8-204ENST00000553622 WNK3Q9BYP7 1800 aa12.92□□□□□ -0.34
CHD8-204ENST00000553622 WDR17Q8IZU2 1322 aa12.92□□□□□ -0.34
CHD8-204ENST00000553622 FCHSD2O94868 740 aa12.92□□□□□ -0.34
CHD8-204ENST00000553622 USP35Q9P2H5 1018 aa12.92□□□□□ -0.34
CHD8-204ENST00000553622 PARP4Q9UKK3 1724 aaKnown RBP12.92□□□□□ -0.34
CHD8-204ENST00000553622 KAT6BQ8WYB5 2073 aa12.92□□□□□ -0.34
CHD8-204ENST00000553622 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.91□□□□□ -0.34
CHD8-204ENST00000553622 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
CHD8-204ENST00000553622 APAF1O14727 1248 aa12.9□□□□□ -0.34
CHD8-204ENST00000553622 RRP7AQ9Y3A4 280 aaKnown RBP12.9□□□□□ -0.34
CHD8-204ENST00000553622 CRB1P82279 1406 aa12.89□□□□□ -0.35
CHD8-204ENST00000553622 SLIT2O94813 1529 aa12.89□□□□□ -0.35
CHD8-204ENST00000553622 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
CHD8-204ENST00000553622 USP21Q9UK80 565 aa12.89□□□□□ -0.35
CHD8-204ENST00000553622 AFF2P51816 1311 aa12.88□□□□□ -0.35
CHD8-204ENST00000553622 TCP11L2Q8N4U5 519 aa12.88□□□□□ -0.35
CHD8-204ENST00000553622 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
CHD8-204ENST00000553622 PLEKHF1Q96S99 279 aa12.88□□□□□ -0.35
CHD8-204ENST00000553622 CARD10Q9BWT7 1032 aa12.88□□□□□ -0.35
CHD8-204ENST00000553622 KDRP35968 1356 aa12.88□□□□□ -0.35
CHD8-204ENST00000553622 TATP17735 454 aaPredicted RBP12.87□□□□□ -0.35
CHD8-204ENST00000553622 UNC5CLQ8IV45 518 aa12.87□□□□□ -0.35
CHD8-204ENST00000553622 PKD1L3Q7Z443 1732 aa12.86□□□□□ -0.35
CHD8-204ENST00000553622 MEGF6O75095 1541 aa12.86□□□□□ -0.35
CHD8-204ENST00000553622 NCAPD2Q15021 1401 aa12.86□□□□□ -0.35
CHD8-204ENST00000553622 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
CHD8-204ENST00000553622 TMPOP42166 694 aaKnown RBP12.85□□□□□ -0.35
CHD8-204ENST00000553622 RIPK4P57078 832 aa12.85□□□□□ -0.35
CHD8-204ENST00000553622 NFE2L2Q16236 605 aa12.85□□□□□ -0.35
CHD8-204ENST00000553622 PLEKHO1Q53GL0 409 aaPredicted RBP12.85□□□□□ -0.35
CHD8-204ENST00000553622 FNBP4Q8N3X1 1017 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms