RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 ERICH6Q7L0X2 663 aa7.75□□□□□ -1.17
PCNX4-206ENST00000553513 KLF16Q9BXK1 252 aaPredicted RBP7.75□□□□□ -1.17
PCNX4-206ENST00000553513 SENP2Q9HC62 589 aa7.75□□□□□ -1.17
PCNX4-206ENST00000553513 GMPR2Q9P2T1 348 aaKnown RBP7.75□□□□□ -1.17
PCNX4-206ENST00000553513 POTECB2RU33 542 aa7.74□□□□□ -1.17
PCNX4-206ENST00000553513 FBXO45P0C2W1 286 aa7.74□□□□□ -1.17
PCNX4-206ENST00000553513 DHX9Q08211 1270 aaKnown RBP7.74□□□□□ -1.17
PCNX4-206ENST00000553513 ZNF592Q92610 1267 aa7.74□□□□□ -1.17
PCNX4-206ENST00000553513 ZNF330Q9Y3S2 320 aaPredicted RBP7.74□□□□□ -1.17
PCNX4-206ENST00000553513 EMILIN1Q9Y6C2 1016 aa7.74□□□□□ -1.17
PCNX4-206ENST00000553513 C11orf95C9JLR9 678 aaPredicted RBP7.73□□□□□ -1.17
PCNX4-206ENST00000553513 BMP1P13497 986 aa7.73□□□□□ -1.17
PCNX4-206ENST00000553513 NR1H3Q13133 447 aa7.73□□□□□ -1.17
PCNX4-206ENST00000553513 KIFC2Q96AC6 838 aa7.73□□□□□ -1.17
PCNX4-206ENST00000553513 ITPKCQ96DU7 683 aa7.73□□□□□ -1.17
PCNX4-206ENST00000553513 PGPEP1Q9NXJ5 209 aa7.73□□□□□ -1.17
PCNX4-206ENST00000553513 GPR37L1O60883 481 aa7.72□□□□□ -1.17
PCNX4-206ENST00000553513 MCCD1P59942 119 aaPredicted RBP7.72□□□□□ -1.17
PCNX4-206ENST00000553513 MCM6Q14566 821 aa7.72□□□□□ -1.17
PCNX4-206ENST00000553513 ZFAND3Q9H8U3 227 aa7.72□□□□□ -1.17
PCNX4-206ENST00000553513 TBC1D2BQ9UPU7 963 aa7.72□□□□□ -1.17
PCNX4-206ENST00000553513 PCDHB9Q9Y5E1 797 aa7.72□□□□□ -1.17
PCNX4-206ENST00000553513 SCARF1Q14162 830 aa7.71□□□□□ -1.18
PCNX4-206ENST00000553513 INTS6LQ5JSJ4 861 aaKnown RBP7.71□□□□□ -1.18
PCNX4-206ENST00000553513 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.18
PCNX4-206ENST00000553513 MRPL14Q6P1L8 145 aaKnown RBP7.71□□□□□ -1.18
PCNX4-206ENST00000553513 TRIM46Q7Z4K8 759 aa7.71□□□□□ -1.18
PCNX4-206ENST00000553513 TRIM47Q96LD4 638 aa7.71□□□□□ -1.18
PCNX4-206ENST00000553513 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
PCNX4-206ENST00000553513 ESPNB1AK53 854 aa7.69□□□□□ -1.18
PCNX4-206ENST00000553513 UPP2O95045 317 aa7.69□□□□□ -1.18
PCNX4-206ENST00000553513 SEPT12Q8IYM1 358 aa7.69□□□□□ -1.18
PCNX4-206ENST00000553513 TRIM52Q96A61 297 aa7.69□□□□□ -1.18
PCNX4-206ENST00000553513 RAB15P59190 212 aa7.68□□□□□ -1.18
PCNX4-206ENST00000553513 FLIIQ13045 1269 aa7.68□□□□□ -1.18
PCNX4-206ENST00000553513 CCDC125Q86Z20 511 aa7.68□□□□□ -1.18
PCNX4-206ENST00000553513 MEIOBQ8N635 442 aa7.68□□□□□ -1.18
PCNX4-206ENST00000553513 GDPD2Q9HCC8 539 aa7.68□□□□□ -1.18
PCNX4-206ENST00000553513 SNRPBP14678 240 aaKnown RBP7.67□□□□□ -1.18
PCNX4-206ENST00000553513 ZFP42Q96MM3 310 aa7.67□□□□□ -1.18
PCNX4-206ENST00000553513 PURBQ96QR8 312 aaKnown RBP7.67□□□□□ -1.18
PCNX4-206ENST00000553513 ERVH48-1M5A8F1 160 aa7.66□□□□□ -1.18
PCNX4-206ENST00000553513 GIGYF1O75420 1035 aaPredicted RBP7.66□□□□□ -1.18
PCNX4-206ENST00000553513 ABL2P42684 1182 aa7.66□□□□□ -1.18
PCNX4-206ENST00000553513 RNF20Q5VTR2 975 aa7.66□□□□□ -1.18
PCNX4-206ENST00000553513 Q6ZVU0 165 aa7.66□□□□□ -1.18
PCNX4-206ENST00000553513 LINC00528Q8N1L1 170 aa7.66□□□□□ -1.18
PCNX4-206ENST00000553513 TSEN34Q9BSV6 310 aaKnown RBP7.66□□□□□ -1.18
PCNX4-206ENST00000553513 BMP2P12643 396 aa7.65□□□□□ -1.18
PCNX4-206ENST00000553513 EIF4G2P78344 907 aaKnown RBP eCLIP7.65□□□□□ -1.18
PCNX4-206ENST00000553513 IRF5Q13568 498 aa7.65□□□□□ -1.18
PCNX4-206ENST00000553513 WASHC4Q2M389 1173 aa7.65□□□□□ -1.18
PCNX4-206ENST00000553513 CBLBQ13191 982 aa7.64□□□□□ -1.19
PCNX4-206ENST00000553513 C6orf118Q5T5N4 469 aa7.64□□□□□ -1.19
PCNX4-206ENST00000553513 ZNF784Q8NCA9 323 aaPredicted RBP7.64□□□□□ -1.19
PCNX4-206ENST00000553513 ZNF775Q96BV0 537 aaPredicted RBP7.64□□□□□ -1.19
PCNX4-206ENST00000553513 TMPRSS4Q9NRS4 437 aa7.64□□□□□ -1.19
PCNX4-206ENST00000553513 RAD21O60216 631 aa7.63□□□□□ -1.19
PCNX4-206ENST00000553513 WWC1Q8IX03 1113 aa7.63□□□□□ -1.19
PCNX4-206ENST00000553513 COG6Q9Y2V7 657 aa7.63□□□□□ -1.19
PCNX4-206ENST00000553513 UBTFP17480 764 aaKnown RBP7.62□□□□□ -1.19
PCNX4-206ENST00000553513 VAC14Q08AM6 782 aa7.62□□□□□ -1.19
PCNX4-206ENST00000553513 CYLDQ9NQC7 956 aa7.61□□□□□ -1.19
PCNX4-206ENST00000553513 CEP126Q9P2H0 1117 aa7.61□□□□□ -1.19
PCNX4-206ENST00000553513 LILRA1O75019 489 aa7.6□□□□□ -1.19
PCNX4-206ENST00000553513 ADH1AP07327 375 aa7.6□□□□□ -1.19
PCNX4-206ENST00000553513 TIMELESSQ9UNS1 1208 aa7.6□□□□□ -1.19
PCNX4-206ENST00000553513 SPINT1O43278 529 aa7.59□□□□□ -1.19
PCNX4-206ENST00000553513 MAN1A2O60476 641 aa7.59□□□□□ -1.19
PCNX4-206ENST00000553513 SOX11P35716 441 aa7.59□□□□□ -1.19
PCNX4-206ENST00000553513 RELBQ01201 579 aa7.59□□□□□ -1.19
PCNX4-206ENST00000553513 AGBL1Q96MI9 1066 aa7.59□□□□□ -1.19
PCNX4-206ENST00000553513 PCDHB11Q9Y5F2 797 aa7.59□□□□□ -1.19
PCNX4-206ENST00000553513 SOS2Q07890 1332 aaPredicted RBP7.58□□□□□ -1.2
PCNX4-206ENST00000553513 ADD1P35611 737 aaKnown RBP7.58□□□□□ -1.2
PCNX4-206ENST00000553513 ERVK-9P63128 1117 aa7.58□□□□□ -1.2
PCNX4-206ENST00000553513 SEMA3FQ13275 785 aa7.58□□□□□ -1.2
PCNX4-206ENST00000553513 SLFNL1Q499Z3 407 aa7.58□□□□□ -1.2
PCNX4-206ENST00000553513 CC2D2BQ6DHV5 1058 aa7.58□□□□□ -1.2
PCNX4-206ENST00000553513 POM121Q96HA1 1249 aa7.58□□□□□ -1.2
PCNX4-206ENST00000553513 ESF1Q9H501 851 aaKnown RBP7.58□□□□□ -1.2
PCNX4-206ENST00000553513 TTLL8A6PVC2 850 aa7.57□□□□□ -1.2
PCNX4-206ENST00000553513 C14orf37Q86TY3 774 aa7.57□□□□□ -1.2
PCNX4-206ENST00000553513 ATP5J2-PTCD1G3V325 749 aa7.56□□□□□ -1.2
PCNX4-206ENST00000553513 PTGIRP43119 386 aa7.56□□□□□ -1.2
PCNX4-206ENST00000553513 NXF1Q9UBU9 619 aaKnown RBP7.56□□□□□ -1.2
PCNX4-206ENST00000553513 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
PCNX4-206ENST00000553513 TERTO14746 1132 aaKnown RBP7.55□□□□□ -1.2
PCNX4-206ENST00000553513 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.55□□□□□ -1.2
PCNX4-206ENST00000553513 TREML4Q6UXN2 200 aa7.55□□□□□ -1.2
PCNX4-206ENST00000553513 CYP2U1Q7Z449 544 aa7.55□□□□□ -1.2
PCNX4-206ENST00000553513 RNF135Q8IUD6 432 aa7.55□□□□□ -1.2
PCNX4-206ENST00000553513 CCDC85AQ96PX6 553 aaPredicted RBP7.55□□□□□ -1.2
PCNX4-206ENST00000553513 INSM2Q96T92 566 aaPredicted RBP7.55□□□□□ -1.2
PCNX4-206ENST00000553513 ZNF395Q9H8N7 513 aaPredicted RBP7.55□□□□□ -1.2
PCNX4-206ENST00000553513 POLMQ9NP87 494 aaPredicted RBP7.55□□□□□ -1.2
PCNX4-206ENST00000553513 DNMT3LQ9UJW3 386 aa7.55□□□□□ -1.2
PCNX4-206ENST00000553513 MYCP01106 439 aaPredicted RBP7.54□□□□□ -1.2
PCNX4-206ENST00000553513 SCTRP47872 440 aa7.54□□□□□ -1.2
PCNX4-206ENST00000553513 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms