RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 CARD10Q9BWT7 1032 aa13.38□□□□□ -0.27
CHD8-203ENST00000553283 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
CHD8-203ENST00000553283 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
CHD8-203ENST00000553283 KTN1Q86UP2 1357 aaKnown RBP13.37□□□□□ -0.27
CHD8-203ENST00000553283 PARP4Q9UKK3 1724 aaKnown RBP13.37□□□□□ -0.27
CHD8-203ENST00000553283 CSB-PGBD3P0DP91 1061 aa13.37□□□□□ -0.27
CHD8-203ENST00000553283 COL18A1P39060 1754 aa13.36□□□□□ -0.27
CHD8-203ENST00000553283 PTF1AQ7RTS3 328 aa13.36□□□□□ -0.27
CHD8-203ENST00000553283 PIK3C2AO00443 1686 aa13.36□□□□□ -0.27
CHD8-203ENST00000553283 SBNO2Q9Y2G9 1366 aa13.35□□□□□ -0.27
CHD8-203ENST00000553283 EXOC5O00471 708 aa13.35□□□□□ -0.27
CHD8-203ENST00000553283 CARD11Q9BXL7 1154 aa13.35□□□□□ -0.27
CHD8-203ENST00000553283 SPON1Q9HCB6 807 aa13.35□□□□□ -0.27
CHD8-203ENST00000553283 RREB1Q92766 1687 aa13.34□□□□□ -0.27
CHD8-203ENST00000553283 BCL9O00512 1426 aa13.34□□□□□ -0.27
CHD8-203ENST00000553283 KCNQ2O43526 872 aa13.34□□□□□ -0.27
CHD8-203ENST00000553283 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.34□□□□□ -0.277e-6■■■■□ 19.6
CHD8-203ENST00000553283 USP31Q70CQ4 1352 aa13.33□□□□□ -0.27
CHD8-203ENST00000553283 PEAK1Q9H792 1746 aa13.33□□□□□ -0.27
CHD8-203ENST00000553283 PROM2Q8N271 834 aa13.33□□□□□ -0.28
CHD8-203ENST00000553283 TMC1Q8TDI8 760 aa13.33□□□□□ -0.28
CHD8-203ENST00000553283 NUP188Q5SRE5 1749 aa13.33□□□□□ -0.28
CHD8-203ENST00000553283 CCDC7Q96M83 1385 aa13.32□□□□□ -0.28
CHD8-203ENST00000553283 NME9Q86XW9 330 aa13.32□□□□□ -0.28
CHD8-203ENST00000553283 SLC12A5Q9H2X9 1139 aa13.32□□□□□ -0.28
CHD8-203ENST00000553283 NFAT5O94916 1531 aa13.32□□□□□ -0.28
CHD8-203ENST00000553283 LRRC37A3O60309 1634 aa13.31□□□□□ -0.28
CHD8-203ENST00000553283 AKAP12Q02952 1782 aa13.31□□□□□ -0.28
CHD8-203ENST00000553283 HDGFL2Q7Z4V5 671 aaPredicted RBP13.31□□□□□ -0.28
CHD8-203ENST00000553283 PUS7Q96PZ0 661 aaKnown RBP13.31□□□□□ -0.28
CHD8-203ENST00000553283 ANO8Q9HCE9 1232 aaPredicted RBP13.31□□□□□ -0.28
CHD8-203ENST00000553283 PPP1R1BQ9UD71 204 aaPredicted RBP13.31□□□□□ -0.28
CHD8-203ENST00000553283 NLRP2Q9NX02 1062 aa13.3□□□□□ -0.28
CHD8-203ENST00000553283 CD163L1Q9NR16 1453 aa13.29□□□□□ -0.28
CHD8-203ENST00000553283 TXNRD1Q16881 649 aa13.29□□□□□ -0.28
CHD8-203ENST00000553283 TERF2IPQ9NYB0 399 aa13.29□□□□□ -0.28
CHD8-203ENST00000553283 ERBB3P21860 1342 aa13.29□□□□□ -0.28
CHD8-203ENST00000553283 ABCC6O95255 1503 aa13.29□□□□□ -0.28
CHD8-203ENST00000553283 IL2RBP14784 551 aa13.28□□□□□ -0.28
CHD8-203ENST00000553283 SBF2Q86WG5 1849 aa13.27□□□□□ -0.28
CHD8-203ENST00000553283 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
CHD8-203ENST00000553283 PDGFDQ9GZP0 370 aaPredicted RBP13.27□□□□□ -0.29
CHD8-203ENST00000553283 STK32BQ9NY57 414 aa13.27□□□□□ -0.29
CHD8-203ENST00000553283 TONSLQ96HA7 1378 aa13.27□□□□□ -0.29
CHD8-203ENST00000553283 RGPD3A6NKT7 1758 aaPredicted RBP13.26□□□□□ -0.29
CHD8-203ENST00000553283 SLC15A2Q16348 729 aa13.26□□□□□ -0.29
CHD8-203ENST00000553283 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
CHD8-203ENST00000553283 RGPD4Q7Z3J3 1758 aa13.26□□□□□ -0.29
CHD8-203ENST00000553283 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
CHD8-203ENST00000553283 NINLQ9Y2I6 1382 aa13.26□□□□□ -0.29
CHD8-203ENST00000553283 MON2Q7Z3U7 1717 aa13.25□□□□□ -0.29
CHD8-203ENST00000553283 TNS2Q63HR2 1409 aa13.25□□□□□ -0.29
CHD8-203ENST00000553283 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
CHD8-203ENST00000553283 ZBTB7AO95365 584 aa13.25□□□□□ -0.29
CHD8-203ENST00000553283 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
CHD8-203ENST00000553283 TESK2Q96S53 571 aa13.25□□□□□ -0.29
CHD8-203ENST00000553283 A0A1W2PP64 1363 aa13.24□□□□□ -0.29
CHD8-203ENST00000553283 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
CHD8-203ENST00000553283 YY1P25490 414 aa13.24□□□□□ -0.29
CHD8-203ENST00000553283 IP6K1Q92551 441 aa13.24□□□□□ -0.29
CHD8-203ENST00000553283 WNK3Q9BYP7 1800 aa13.24□□□□□ -0.29
CHD8-203ENST00000553283 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
CHD8-203ENST00000553283 PTGER2P43116 358 aa13.23□□□□□ -0.29
CHD8-203ENST00000553283 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
CHD8-203ENST00000553283 USP54Q70EL1 1684 aa13.22□□□□□ -0.29
CHD8-203ENST00000553283 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
CHD8-203ENST00000553283 COG3Q96JB2 828 aa13.21□□□□□ -0.29
CHD8-203ENST00000553283 MTFR1LQ9H019 292 aa13.2□□□□□ -0.3
CHD8-203ENST00000553283 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
CHD8-203ENST00000553283 DDX54Q8TDD1 881 aaKnown RBP13.19□□□□□ -0.3
CHD8-203ENST00000553283 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
CHD8-203ENST00000553283 FBLN1P23142 703 aa13.18□□□□□ -0.3
CHD8-203ENST00000553283 HOXC9P31274 260 aa13.18□□□□□ -0.3
CHD8-203ENST00000553283 AMPHP49418 695 aa13.18□□□□□ -0.3
CHD8-203ENST00000553283 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
CHD8-203ENST00000553283 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
CHD8-203ENST00000553283 LTN1O94822 1766 aa13.17□□□□□ -0.3
CHD8-203ENST00000553283 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
CHD8-203ENST00000553283 NHSQ6T4R5 1651 aa13.17□□□□□ -0.3
CHD8-203ENST00000553283 ZNF827Q17R98 1081 aa13.16□□□□□ -0.3
CHD8-203ENST00000553283 SLC27A3Q5K4L6 730 aa13.16□□□□□ -0.3
CHD8-203ENST00000553283 FHDC1Q9C0D6 1143 aaPredicted RBP13.16□□□□□ -0.3
CHD8-203ENST00000553283 ANKRD36BQ8N2N9 1353 aa13.16□□□□□ -0.3
CHD8-203ENST00000553283 FYB1O15117 783 aa13.15□□□□□ -0.3
CHD8-203ENST00000553283 PRIM1P49642 420 aaKnown RBP13.15□□□□□ -0.3
CHD8-203ENST00000553283 TMF1P82094 1093 aa13.15□□□□□ -0.3
CHD8-203ENST00000553283 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
CHD8-203ENST00000553283 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
CHD8-203ENST00000553283 ARXQ96QS3 562 aa13.15□□□□□ -0.3
CHD8-203ENST00000553283 SYTL4Q96C24 671 aaPredicted RBP13.14□□□□□ -0.31
CHD8-203ENST00000553283 KAT6BQ8WYB5 2073 aa13.13□□□□□ -0.31
CHD8-203ENST00000553283 RRS1Q15050 365 aaKnown RBP13.13□□□□□ -0.31
CHD8-203ENST00000553283 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
CHD8-203ENST00000553283 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
CHD8-203ENST00000553283 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
CHD8-203ENST00000553283 GGNBP2Q9H3C7 697 aa13.13□□□□□ -0.31
CHD8-203ENST00000553283 RTL1A6NKG5 1358 aa13.12□□□□□ -0.31
CHD8-203ENST00000553283 BTAF1O14981 1849 aa13.12□□□□□ -0.31
CHD8-203ENST00000553283 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
CHD8-203ENST00000553283 PAPPAQ13219 1627 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms