RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 ZNF775Q96BV0 537 aaPredicted RBP11.9□□□□□ -0.5
GNPTAB-209ENST00000552009 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
GNPTAB-209ENST00000552009 C11orf95C9JLR9 678 aaPredicted RBP11.89□□□□□ -0.51
GNPTAB-209ENST00000552009 VARSP26640 1264 aaKnown RBP11.89□□□□□ -0.51
GNPTAB-209ENST00000552009 CLK2P49760 499 aaKnown RBP11.89□□□□□ -0.51
GNPTAB-209ENST00000552009 HPS1Q92902 700 aa11.89□□□□□ -0.51
GNPTAB-209ENST00000552009 DACH1Q9UI36 760 aa11.89□□□□□ -0.51
GNPTAB-209ENST00000552009 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
GNPTAB-209ENST00000552009 SIAH2O43255 324 aa11.88□□□□□ -0.51
GNPTAB-209ENST00000552009 LILRB3O75022 631 aa11.87□□□□□ -0.51
GNPTAB-209ENST00000552009 QPCTQ16769 361 aa11.87□□□□□ -0.51
GNPTAB-209ENST00000552009 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
GNPTAB-209ENST00000552009 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
GNPTAB-209ENST00000552009 DIP2BQ9P265 1576 aa11.87□□□□□ -0.51
GNPTAB-209ENST00000552009 SENP2Q9HC62 589 aa11.86□□□□□ -0.51
GNPTAB-209ENST00000552009 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
GNPTAB-209ENST00000552009 GMPR2Q9P2T1 348 aaKnown RBP11.86□□□□□ -0.51
GNPTAB-209ENST00000552009 MAPKBP1O60336 1514 aa11.86□□□□□ -0.51
GNPTAB-209ENST00000552009 ARMC2Q8NEN0 867 aa11.85□□□□□ -0.51
GNPTAB-209ENST00000552009 ATP13A2Q9NQ11 1180 aa11.85□□□□□ -0.51
GNPTAB-209ENST00000552009 MAP10Q9P2G4 905 aa11.85□□□□□ -0.51
GNPTAB-209ENST00000552009 F12P00748 615 aaPredicted RBP11.84□□□□□ -0.51
GNPTAB-209ENST00000552009 AGERQ15109 404 aa11.84□□□□□ -0.51
GNPTAB-209ENST00000552009 FAM174AQ8TBP5 190 aa11.84□□□□□ -0.51
GNPTAB-209ENST00000552009 DDRGK1Q96HY6 314 aa11.84□□□□□ -0.51
GNPTAB-209ENST00000552009 PTPRGP23470 1445 aa11.84□□□□□ -0.51
GNPTAB-209ENST00000552009 KDM4CQ9H3R0 1056 aa11.83□□□□□ -0.52
GNPTAB-209ENST00000552009 IQGAP2Q13576 1575 aa11.83□□□□□ -0.52
GNPTAB-209ENST00000552009 KIFC2Q96AC6 838 aa11.81□□□□□ -0.52
GNPTAB-209ENST00000552009 PER1O15534 1290 aaPredicted RBP11.8□□□□□ -0.52
GNPTAB-209ENST00000552009 SKIV2LQ15477 1246 aaKnown RBP11.8□□□□□ -0.52
GNPTAB-209ENST00000552009 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
GNPTAB-209ENST00000552009 BPHLQ86WA6 291 aaPredicted RBP11.8□□□□□ -0.52
GNPTAB-209ENST00000552009 MPNDQ8N594 471 aa11.8□□□□□ -0.52
GNPTAB-209ENST00000552009 GPBP1L1Q9HC44 474 aaPredicted RBP11.8□□□□□ -0.52
GNPTAB-209ENST00000552009 TSPOAP1O95153 1857 aa11.8□□□□□ -0.52
GNPTAB-209ENST00000552009 DISP1Q96F81 1524 aa11.8□□□□□ -0.52
GNPTAB-209ENST00000552009 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
GNPTAB-209ENST00000552009 CARMIL2Q6F5E8 1435 aa11.79□□□□□ -0.52
GNPTAB-209ENST00000552009 CAPN5O15484 640 aaPredicted RBP11.79□□□□□ -0.52
GNPTAB-209ENST00000552009 NBPF14Q5TI25 921 aa11.79□□□□□ -0.52
GNPTAB-209ENST00000552009 TLL2Q9Y6L7 1015 aa11.79□□□□□ -0.52
GNPTAB-209ENST00000552009 RAPGEF2Q9Y4G8 1499 aa11.77□□□□□ -0.52
GNPTAB-209ENST00000552009 ABCC2Q92887 1545 aa11.77□□□□□ -0.52
GNPTAB-209ENST00000552009 SH3D19Q5HYK7 790 aa11.77□□□□□ -0.53
GNPTAB-209ENST00000552009 FOXJ1Q92949 421 aa11.77□□□□□ -0.53
GNPTAB-209ENST00000552009 TRIM47Q96LD4 638 aa11.77□□□□□ -0.53
GNPTAB-209ENST00000552009 KDM6BO15054 1643 aa11.77□□□□□ -0.53
GNPTAB-209ENST00000552009 ASXL2Q76L83 1435 aa11.77□□□□□ -0.53
GNPTAB-209ENST00000552009 ARID5BQ14865 1188 aa11.76□□□□□ -0.53
GNPTAB-209ENST00000552009 NNTQ13423 1086 aa11.75□□□□□ -0.53
GNPTAB-209ENST00000552009 FAM117AQ9C073 453 aa11.74□□□□□ -0.53
GNPTAB-209ENST00000552009 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
GNPTAB-209ENST00000552009 KIAA0556O60303 1618 aa11.74□□□□□ -0.53
GNPTAB-209ENST00000552009 ADH1CP00326 375 aa11.73□□□□□ -0.53
GNPTAB-209ENST00000552009 UGGT2Q9NYU1 1516 aa11.73□□□□□ -0.53
GNPTAB-209ENST00000552009 TREML4Q6UXN2 200 aa11.72□□□□□ -0.53
GNPTAB-209ENST00000552009 GPKOWQ92917 476 aaPredicted RBP eCLIP11.72□□□□□ -0.53
GNPTAB-209ENST00000552009 PPRC1Q5VV67 1664 aaKnown RBP11.71□□□□□ -0.53
GNPTAB-209ENST00000552009 UHRF1BP1LA0JNW5 1464 aa11.71□□□□□ -0.53
GNPTAB-209ENST00000552009 SNRPBP14678 240 aaKnown RBP11.71□□□□□ -0.53
GNPTAB-209ENST00000552009 CDK15Q96Q40 435 aa11.71□□□□□ -0.53
GNPTAB-209ENST00000552009 ZCCHC11Q5TAX3 1644 aaKnown RBP11.71□□□□□ -0.54
GNPTAB-209ENST00000552009 PLB1Q6P1J6 1458 aa11.7□□□□□ -0.54
GNPTAB-209ENST00000552009 CTDSPL2Q05D32 466 aa11.7□□□□□ -0.54
GNPTAB-209ENST00000552009 NR5A1Q13285 461 aa11.7□□□□□ -0.54
GNPTAB-209ENST00000552009 ARID3CA6NKF2 412 aa11.69□□□□□ -0.54
GNPTAB-209ENST00000552009 WDR4P57081 412 aaKnown RBP11.69□□□□□ -0.54
GNPTAB-209ENST00000552009 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
GNPTAB-209ENST00000552009 KDM5BQ9UGL1 1544 aa11.69□□□□□ -0.54
GNPTAB-209ENST00000552009 CTTNBP2Q8WZ74 1663 aa11.68□□□□□ -0.54
GNPTAB-209ENST00000552009 WFS1O76024 890 aa11.68□□□□□ -0.54
GNPTAB-209ENST00000552009 BMP1P13497 986 aa11.68□□□□□ -0.54
GNPTAB-209ENST00000552009 SCARF1Q14162 830 aa11.68□□□□□ -0.54
GNPTAB-209ENST00000552009 EPRSP07814 1512 aaKnown RBP11.68□□□□□ -0.54
GNPTAB-209ENST00000552009 COL17A1Q9UMD9 1497 aaPredicted RBP11.68□□□□□ -0.54
GNPTAB-209ENST00000552009 MAGEB6P1A0A0J9YX57 407 aa11.67□□□□□ -0.54
GNPTAB-209ENST00000552009 PPP2R2DQ66LE6 453 aa11.67□□□□□ -0.54
GNPTAB-209ENST00000552009 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.67□□□□□ -0.54
GNPTAB-209ENST00000552009 GLI2P10070 1586 aa11.67□□□□□ -0.54
GNPTAB-209ENST00000552009 C4orf48Q5BLP8 95 aa11.66□□□□□ -0.54
GNPTAB-209ENST00000552009 PNMA1Q8ND90 353 aa11.66□□□□□ -0.54
GNPTAB-209ENST00000552009 PRXQ9BXM0 1461 aa11.65□□□□□ -0.54
GNPTAB-209ENST00000552009 AP1G2O75843 785 aa11.65□□□□□ -0.54
GNPTAB-209ENST00000552009 SH3BP5LQ7L8J4 393 aa11.65□□□□□ -0.54
GNPTAB-209ENST00000552009 TRIM46Q7Z4K8 759 aa11.65□□□□□ -0.54
GNPTAB-209ENST00000552009 MAP3K4Q9Y6R4 1608 aa11.64□□□□□ -0.55
GNPTAB-209ENST00000552009 TIMP2P16035 220 aa11.64□□□□□ -0.55
GNPTAB-209ENST00000552009 VASH1Q7L8A9 365 aaPredicted RBP11.64□□□□□ -0.55
GNPTAB-209ENST00000552009 SH3RF1Q7Z6J0 888 aa11.64□□□□□ -0.55
GNPTAB-209ENST00000552009 LRRN4Q8WUT4 740 aa11.64□□□□□ -0.55
GNPTAB-209ENST00000552009 C1QTNF2Q9BXJ5 285 aa11.64□□□□□ -0.55
GNPTAB-209ENST00000552009 CARD14Q9BXL6 1004 aa11.64□□□□□ -0.55
GNPTAB-209ENST00000552009 FKBPLQ9UIM3 349 aa11.64□□□□□ -0.55
GNPTAB-209ENST00000552009 RANGAP1P46060 587 aaPredicted RBP11.63□□□□□ -0.55
GNPTAB-209ENST00000552009 NEUROD2Q15784 382 aa11.63□□□□□ -0.55
GNPTAB-209ENST00000552009 MRPL14Q6P1L8 145 aaKnown RBP11.63□□□□□ -0.55
GNPTAB-209ENST00000552009 MAP4K5Q9Y4K4 846 aa11.63□□□□□ -0.55
GNPTAB-209ENST00000552009 WDR7Q9Y4E6 1490 aa11.63□□□□□ -0.55
GNPTAB-209ENST00000552009 ZC3H4Q9UPT8 1303 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms