RNA–Protein interactions for RNA: ENST00000551459.5

RAB5B-209, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-209ENST00000551459 ADGRB1O14514 1584 aa8.05□□□□□ -1.12
RAB5B-209ENST00000551459 ONECUT3O60422 494 aaPredicted RBP8.05□□□□□ -1.12
RAB5B-209ENST00000551459 CFAP70Q5T0N1 1121 aa8.05□□□□□ -1.12
RAB5B-209ENST00000551459 SEPT12Q8IYM1 358 aa8.05□□□□□ -1.12
RAB5B-209ENST00000551459 CABLES1Q8TDN4 633 aa8.05□□□□□ -1.12
RAB5B-209ENST00000551459 GPRASP1Q5JY77 1395 aa8.05□□□□□ -1.12
RAB5B-209ENST00000551459 POTEIP0CG38 1075 aa8.04□□□□□ -1.12
RAB5B-209ENST00000551459 VPS72Q15906 364 aa8.04□□□□□ -1.12
RAB5B-209ENST00000551459 IL27Q8NEV9 243 aa8.04□□□□□ -1.12
RAB5B-209ENST00000551459 GLI3P10071 1580 aa8.04□□□□□ -1.12
RAB5B-209ENST00000551459 BLMP54132 1417 aaPredicted RBP8.03□□□□□ -1.12
RAB5B-209ENST00000551459 YTHDC2Q9H6S0 1430 aaKnown RBP8.03□□□□□ -1.12
RAB5B-209ENST00000551459 PHF8Q9UPP1 1060 aa8.03□□□□□ -1.12
RAB5B-209ENST00000551459 FAM83GA6ND36 823 aa8.02□□□□□ -1.13
RAB5B-209ENST00000551459 CLCN6P51797 869 aa8.02□□□□□ -1.13
RAB5B-209ENST00000551459 PSME1Q06323 249 aa8.02□□□□□ -1.13
RAB5B-209ENST00000551459 NBPF8Q3BBV2 869 aa8.02□□□□□ -1.13
RAB5B-209ENST00000551459 GPBP1L1Q9HC44 474 aaPredicted RBP8.02□□□□□ -1.13
RAB5B-209ENST00000551459 ARHGEF28Q8N1W1 1705 aaKnown RBP8.02□□□□□ -1.13
RAB5B-209ENST00000551459 ROCK2O75116 1388 aaKnown RBP8.01□□□□□ -1.13
RAB5B-209ENST00000551459 EIF3AQ14152 1382 aaKnown RBP8.01□□□□□ -1.13
RAB5B-209ENST00000551459 SF3B2Q13435 895 aaKnown RBP8.01□□□□□ -1.13
RAB5B-209ENST00000551459 KRT27Q7Z3Y8 459 aa8.01□□□□□ -1.13
RAB5B-209ENST00000551459 KDM4CQ9H3R0 1056 aa8.01□□□□□ -1.13
RAB5B-209ENST00000551459 TNS3Q68CZ2 1445 aa8.01□□□□□ -1.13
RAB5B-209ENST00000551459 SBNO1A3KN83 1393 aa8□□□□□ -1.13
RAB5B-209ENST00000551459 SBNO2Q9Y2G9 1366 aa8□□□□□ -1.13
RAB5B-209ENST00000551459 PYGBP11216 843 aa8□□□□□ -1.13
RAB5B-209ENST00000551459 FLIIQ13045 1269 aa8□□□□□ -1.13
RAB5B-209ENST00000551459 SAFB2Q14151 953 aaKnown RBP eCLIP8□□□□□ -1.13
RAB5B-209ENST00000551459 NBPF1Q3BBV0 1214 aa8□□□□□ -1.13
RAB5B-209ENST00000551459 ZNF467Q7Z7K2 595 aaPredicted RBP8□□□□□ -1.13
RAB5B-209ENST00000551459 KRI1Q8N9T8 703 aaKnown RBP8□□□□□ -1.13
RAB5B-209ENST00000551459 PMFBP1Q8TBY8 1022 aa8□□□□□ -1.13
RAB5B-209ENST00000551459 PRAM1Q96QH2 718 aa8□□□□□ -1.13
RAB5B-209ENST00000551459 C1orf115Q9H7X2 142 aa8□□□□□ -1.13
RAB5B-209ENST00000551459 APBB1O00213 710 aa7.99□□□□□ -1.13
RAB5B-209ENST00000551459 RASEFQ8IZ41 740 aa7.99□□□□□ -1.13
RAB5B-209ENST00000551459 PUS7Q96PZ0 661 aaKnown RBP7.99□□□□□ -1.13
RAB5B-209ENST00000551459 CARD11Q9BXL7 1154 aa7.99□□□□□ -1.13
RAB5B-209ENST00000551459 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.99□□□□□ -1.13
RAB5B-209ENST00000551459 MARF1Q9Y4F3 1742 aaKnown RBP7.99□□□□□ -1.13
RAB5B-209ENST00000551459 USP32Q8NFA0 1604 aa7.99□□□□□ -1.13
RAB5B-209ENST00000551459 ARHGEF10O15013 1369 aa7.98□□□□□ -1.13
RAB5B-209ENST00000551459 FMN2Q9NZ56 1722 aa7.98□□□□□ -1.13
RAB5B-209ENST00000551459 ADGRB2O60241 1585 aa7.98□□□□□ -1.13
RAB5B-209ENST00000551459 PSDA5PKW4 1024 aaPredicted RBP7.98□□□□□ -1.13
RAB5B-209ENST00000551459 FAM98CQ17RN3 349 aaKnown RBP7.98□□□□□ -1.13
RAB5B-209ENST00000551459 BTG4Q9NY30 223 aa7.98□□□□□ -1.13
RAB5B-209ENST00000551459 A0A0G2JS52 829 aa7.97□□□□□ -1.13
RAB5B-209ENST00000551459 BAG6P46379 1132 aa7.97□□□□□ -1.13
RAB5B-209ENST00000551459 MYT1Q01538 1121 aa7.97□□□□□ -1.13
RAB5B-209ENST00000551459 EN1Q05925 392 aaPredicted RBP7.97□□□□□ -1.13
RAB5B-209ENST00000551459 FAM182BQ5T319 152 aa7.97□□□□□ -1.13
RAB5B-209ENST00000551459 GPIHBP1Q8IV16 184 aa7.97□□□□□ -1.13
RAB5B-209ENST00000551459 DCBLD2Q96PD2 775 aa7.97□□□□□ -1.13
RAB5B-209ENST00000551459 POGKQ9P215 609 aa7.97□□□□□ -1.13
RAB5B-209ENST00000551459 TRAK1Q9UPV9 953 aa7.97□□□□□ -1.13
RAB5B-209ENST00000551459 ARIH1Q9Y4X5 557 aaPredicted RBP7.97□□□□□ -1.13
RAB5B-209ENST00000551459 KIF1AQ12756 1690 aa7.97□□□□□ -1.13
RAB5B-209ENST00000551459 PRR36Q9H6K5 1346 aa7.97□□□□□ -1.13
RAB5B-209ENST00000551459 QRICH2Q9H0J4 1663 aa7.96□□□□□ -1.13
RAB5B-209ENST00000551459 PDAP1Q13442 181 aaKnown RBP7.96□□□□□ -1.14
RAB5B-209ENST00000551459 ZNF579Q8NAF0 562 aaKnown RBP7.96□□□□□ -1.14
RAB5B-209ENST00000551459 HIRIP3Q9BW71 556 aaPredicted RBP7.96□□□□□ -1.14
RAB5B-209ENST00000551459 SPATA31A5Q5VU36 1347 aa7.96□□□□□ -1.14
RAB5B-209ENST00000551459 SPATA31A7Q8IWB4 1347 aa7.96□□□□□ -1.14
RAB5B-209ENST00000551459 CENPJQ9HC77 1338 aaPredicted RBP7.96□□□□□ -1.14
RAB5B-209ENST00000551459 BRWD3Q6RI45 1802 aa7.96□□□□□ -1.14
RAB5B-209ENST00000551459 ANKARQ7Z5J8 1434 aa7.95□□□□□ -1.14
RAB5B-209ENST00000551459 MNX1P50219 401 aaPredicted RBP7.95□□□□□ -1.14
RAB5B-209ENST00000551459 EIF4G2P78344 907 aaKnown RBP eCLIP7.95□□□□□ -1.14
RAB5B-209ENST00000551459 PDE4DQ08499 809 aa7.95□□□□□ -1.14
RAB5B-209ENST00000551459 MKRN3Q13064 507 aaKnown RBP7.95□□□□□ -1.14
RAB5B-209ENST00000551459 CDCA8Q53HL2 280 aa7.95□□□□□ -1.14
RAB5B-209ENST00000551459 MFRPQ9BY79 579 aa7.95□□□□□ -1.14
RAB5B-209ENST00000551459 ITSN1Q15811 1721 aa7.95□□□□□ -1.14
RAB5B-209ENST00000551459 WASLO00401 505 aaPredicted RBP7.94□□□□□ -1.14
RAB5B-209ENST00000551459 R3HDM1Q15032 1099 aaKnown RBP7.94□□□□□ -1.14
RAB5B-209ENST00000551459 CREBZFQ9NS37 354 aa7.94□□□□□ -1.14
RAB5B-209ENST00000551459 MINK1Q8N4C8 1332 aaPredicted RBP7.94□□□□□ -1.14
RAB5B-209ENST00000551459 RGPD8O14715 1765 aaPredicted RBP7.94□□□□□ -1.14
RAB5B-209ENST00000551459 NWD2Q9ULI1 1742 aa7.93□□□□□ -1.14
RAB5B-209ENST00000551459 TRIM66O15016 1216 aa7.93□□□□□ -1.14
RAB5B-209ENST00000551459 EZH2Q15910 746 aaKnown RBP7.93□□□□□ -1.14
RAB5B-209ENST00000551459 EVC2Q86UK5 1308 aa7.93□□□□□ -1.14
RAB5B-209ENST00000551459 USP47Q96K76 1375 aa7.93□□□□□ -1.14
RAB5B-209ENST00000551459 PLCH1Q4KWH8 1693 aa7.92□□□□□ -1.14
RAB5B-209ENST00000551459 ST20-MTHFSA0A0A6YYL1 179 aa7.92□□□□□ -1.14
RAB5B-209ENST00000551459 PAK3O75914 559 aaPredicted RBP7.92□□□□□ -1.14
RAB5B-209ENST00000551459 TMF1P82094 1093 aa7.92□□□□□ -1.14
RAB5B-209ENST00000551459 NGDNQ8NEJ9 315 aaKnown RBP7.92□□□□□ -1.14
RAB5B-209ENST00000551459 DDRGK1Q96HY6 314 aa7.92□□□□□ -1.14
RAB5B-209ENST00000551459 CAMKK2Q96RR4 588 aa7.92□□□□□ -1.14
RAB5B-209ENST00000551459 PRDM11Q9NQV5 511 aa7.92□□□□□ -1.14
RAB5B-209ENST00000551459 SPATA31A1Q5TZJ5 1347 aa7.92□□□□□ -1.14
RAB5B-209ENST00000551459 LRP5O75197 1615 aa7.92□□□□□ -1.14
RAB5B-209ENST00000551459 TRIM37O94972 964 aa7.91□□□□□ -1.14
RAB5B-209ENST00000551459 CHRNA2Q15822 529 aa7.91□□□□□ -1.14
RAB5B-209ENST00000551459 TESK2Q96S53 571 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms