RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
PRPF40B-212ENST00000551111 LTN1O94822 1766 aa16.54■□□□□ 0.24
PRPF40B-212ENST00000551111 KAT6BQ8WYB5 2073 aa16.53■□□□□ 0.24
PRPF40B-212ENST00000551111 CD163L1Q9NR16 1453 aa16.53■□□□□ 0.24
PRPF40B-212ENST00000551111 KTN1Q86UP2 1357 aaKnown RBP16.52■□□□□ 0.24
PRPF40B-212ENST00000551111 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
PRPF40B-212ENST00000551111 WDR17Q8IZU2 1322 aa16.51■□□□□ 0.23
PRPF40B-212ENST00000551111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRPF40B-212ENST00000551111 DDB1Q16531 1140 aa16.5■□□□□ 0.23
PRPF40B-212ENST00000551111 MARCH10Q8NA82 808 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-212ENST00000551111 PARD3Q8TEW0 1356 aa16.5■□□□□ 0.23
PRPF40B-212ENST00000551111 USP54Q70EL1 1684 aa16.5■□□□□ 0.23
PRPF40B-212ENST00000551111 TTC21AQ8NDW8 1320 aa16.49■□□□□ 0.23
PRPF40B-212ENST00000551111 OVOS2A0A0G2JMS6 1433 aa16.49■□□□□ 0.23
PRPF40B-212ENST00000551111 OVOS2A0A0J9YW53 1432 aa16.49■□□□□ 0.23
PRPF40B-212ENST00000551111 OVOS2Q6IE36 1432 aa16.49■□□□□ 0.23
PRPF40B-212ENST00000551111 NME9Q86XW9 330 aa16.49■□□□□ 0.23
PRPF40B-212ENST00000551111 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
PRPF40B-212ENST00000551111 SLC12A5Q9H2X9 1139 aa16.48■□□□□ 0.23
PRPF40B-212ENST00000551111 RGPD3A6NKT7 1758 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-212ENST00000551111 RGPD4Q7Z3J3 1758 aa16.48■□□□□ 0.23
PRPF40B-212ENST00000551111 SBNO2Q9Y2G9 1366 aa16.48■□□□□ 0.23
PRPF40B-212ENST00000551111 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
PRPF40B-212ENST00000551111 CSB-PGBD3P0DP91 1061 aa16.46■□□□□ 0.23
PRPF40B-212ENST00000551111 PROM2Q8N271 834 aa16.46■□□□□ 0.23
PRPF40B-212ENST00000551111 TMC1Q8TDI8 760 aa16.46■□□□□ 0.23
PRPF40B-212ENST00000551111 CARD10Q9BWT7 1032 aa16.46■□□□□ 0.23
PRPF40B-212ENST00000551111 PDGFDQ9GZP0 370 aaPredicted RBP16.45■□□□□ 0.22
PRPF40B-212ENST00000551111 ANO8Q9HCE9 1232 aaPredicted RBP16.45■□□□□ 0.22
PRPF40B-212ENST00000551111 USP31Q70CQ4 1352 aa16.45■□□□□ 0.22
PRPF40B-212ENST00000551111 RGPD2P0DJD1 1756 aa16.43■□□□□ 0.22
PRPF40B-212ENST00000551111 CASZ1Q86V15 1759 aa16.43■□□□□ 0.22
PRPF40B-212ENST00000551111 PLSCR1O15162 318 aa16.43■□□□□ 0.22
PRPF40B-212ENST00000551111 BCL11BQ9C0K0 894 aaPredicted RBP16.43■□□□□ 0.22
PRPF40B-212ENST00000551111 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
PRPF40B-212ENST00000551111 TONSLQ96HA7 1378 aa16.42■□□□□ 0.22
PRPF40B-212ENST00000551111 KCNQ2O43526 872 aa16.42■□□□□ 0.22
PRPF40B-212ENST00000551111 NBPF14Q5TI25 921 aa16.42■□□□□ 0.22
PRPF40B-212ENST00000551111 FBLN1P23142 703 aa16.41■□□□□ 0.22
PRPF40B-212ENST00000551111 TESK2Q96S53 571 aa16.41■□□□□ 0.22
PRPF40B-212ENST00000551111 ABCC6O95255 1503 aa16.4■□□□□ 0.22
PRPF40B-212ENST00000551111 BCL9O00512 1426 aa16.4■□□□□ 0.22
PRPF40B-212ENST00000551111 EXOC5O00471 708 aa16.4■□□□□ 0.22
PRPF40B-212ENST00000551111 ERBB3P21860 1342 aa16.4■□□□□ 0.22
PRPF40B-212ENST00000551111 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.21
PRPF40B-212ENST00000551111 ST20-MTHFSA0A0A6YYL1 179 aa16.39■□□□□ 0.21
PRPF40B-212ENST00000551111 CDCA7Q9BWT1 371 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-212ENST00000551111 NLRP2Q9NX02 1062 aa16.39■□□□□ 0.21
PRPF40B-212ENST00000551111 BTAF1O14981 1849 aa16.39■□□□□ 0.21
PRPF40B-212ENST00000551111 NHSQ6T4R5 1651 aa16.39■□□□□ 0.21
PRPF40B-212ENST00000551111 CCDC7Q96M83 1385 aa16.38■□□□□ 0.21
PRPF40B-212ENST00000551111 TNS2Q63HR2 1409 aa16.38■□□□□ 0.21
PRPF40B-212ENST00000551111 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-212ENST00000551111 HDGFL2Q7Z4V5 671 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-212ENST00000551111 ACSBG1Q96GR2 724 aa16.38■□□□□ 0.21
PRPF40B-212ENST00000551111 ANKRD24Q8TF21 1146 aa16.37■□□□□ 0.21
PRPF40B-212ENST00000551111 TXNRD1Q16881 649 aa16.36■□□□□ 0.21
PRPF40B-212ENST00000551111 SPON1Q9HCB6 807 aa16.36■□□□□ 0.21
PRPF40B-212ENST00000551111 TERF2IPQ9NYB0 399 aa16.35■□□□□ 0.21
PRPF40B-212ENST00000551111 SHANK3Q9BYB0 1731 aa16.34■□□□□ 0.21
PRPF40B-212ENST00000551111 LTV1Q96GA3 475 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-212ENST00000551111 MYOM1P52179 1685 aa16.34■□□□□ 0.21
PRPF40B-212ENST00000551111 ZBTB7AO95365 584 aa16.33■□□□□ 0.2
PRPF40B-212ENST00000551111 IL2RBP14784 551 aa16.33■□□□□ 0.2
PRPF40B-212ENST00000551111 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-212ENST00000551111 FAM208AQ9UK61 1670 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-212ENST00000551111 IP6K1Q92551 441 aa16.32■□□□□ 0.2
PRPF40B-212ENST00000551111 PAPPAQ13219 1627 aa16.31■□□□□ 0.2
PRPF40B-212ENST00000551111 PPP1R1BQ9UD71 204 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-212ENST00000551111 ATF5Q9Y2D1 282 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-212ENST00000551111 MAP3K19Q56UN5 1328 aa16.3■□□□□ 0.2
PRPF40B-212ENST00000551111 PTGER2P43116 358 aa16.3■□□□□ 0.2
PRPF40B-212ENST00000551111 SLC15A2Q16348 729 aa16.3■□□□□ 0.2
PRPF40B-212ENST00000551111 TUBGCP6Q96RT7 1819 aa16.29■□□□□ 0.2
PRPF40B-212ENST00000551111 LRRC4BQ9NT99 713 aa16.29■□□□□ 0.2
PRPF40B-212ENST00000551111 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
PRPF40B-212ENST00000551111 HOXC9P31274 260 aa16.28■□□□□ 0.2
PRPF40B-212ENST00000551111 DDX54Q8TDD1 881 aaKnown RBP16.28■□□□□ 0.2
PRPF40B-212ENST00000551111 KIF20BQ96Q89 1820 aa16.28■□□□□ 0.2
PRPF40B-212ENST00000551111 RRS1Q15050 365 aaKnown RBP16.27■□□□□ 0.2
PRPF40B-212ENST00000551111 COG3Q96JB2 828 aa16.27■□□□□ 0.2
PRPF40B-212ENST00000551111 STK32BQ9NY57 414 aa16.27■□□□□ 0.2
PRPF40B-212ENST00000551111 UTRNP46939 3433 aa16.26■□□□□ 0.19
PRPF40B-212ENST00000551111 FYB1O15117 783 aa16.26■□□□□ 0.19
PRPF40B-212ENST00000551111 KCNQ4P56696 695 aa16.26■□□□□ 0.19
PRPF40B-212ENST00000551111 TRIM26Q12899 539 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-212ENST00000551111 ZNF827Q17R98 1081 aa16.26■□□□□ 0.19
PRPF40B-212ENST00000551111 GGNBP2Q9H3C7 697 aa16.26■□□□□ 0.19
PRPF40B-212ENST00000551111 ANKRD36BQ8N2N9 1353 aa16.26■□□□□ 0.19
PRPF40B-212ENST00000551111 USP47Q96K76 1375 aa16.26■□□□□ 0.19
PRPF40B-212ENST00000551111 MEGF6O75095 1541 aa16.25■□□□□ 0.19
PRPF40B-212ENST00000551111 LY75O60449 1722 aa16.25■□□□□ 0.19
PRPF40B-212ENST00000551111 NINLQ9Y2I6 1382 aa16.25■□□□□ 0.19
PRPF40B-212ENST00000551111 AMPHP49418 695 aa16.24■□□□□ 0.19
PRPF40B-212ENST00000551111 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
PRPF40B-212ENST00000551111 SGIP1Q9BQI5 828 aa16.24■□□□□ 0.19
PRPF40B-212ENST00000551111 NBPF6Q5VWK0 638 aa16.23■□□□□ 0.19
PRPF40B-212ENST00000551111 NBPF4Q96M43 638 aa16.23■□□□□ 0.19
PRPF40B-212ENST00000551111 YY1P25490 414 aa16.22■□□□□ 0.19
PRPF40B-212ENST00000551111 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms