RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 SLC12A5Q9H2X9 1139 aa22.28■■□□□ 1.16
CDK4-206ENST00000549606 WDR17Q8IZU2 1322 aa22.28■■□□□ 1.16
CDK4-206ENST00000549606 CSB-PGBD3P0DP91 1061 aa22.27■■□□□ 1.16
CDK4-206ENST00000549606 HDGFL2Q7Z4V5 671 aaPredicted RBP22.27■■□□□ 1.16
CDK4-206ENST00000549606 CD163L1Q9NR16 1453 aa22.27■■□□□ 1.16
CDK4-206ENST00000549606 CAMKK2Q96RR4 588 aa22.26■■□□□ 1.15
CDK4-206ENST00000549606 NFAT5O94916 1531 aa22.26■■□□□ 1.15
CDK4-206ENST00000549606 NME9Q86XW9 330 aa22.25■■□□□ 1.15
CDK4-206ENST00000549606 WNK3Q9BYP7 1800 aa22.24■■□□□ 1.15
CDK4-206ENST00000549606 LRRC37A3O60309 1634 aa22.24■■□□□ 1.15
CDK4-206ENST00000549606 R3HDM1Q15032 1099 aaKnown RBP22.24■■□□□ 1.15
CDK4-206ENST00000549606 DDB1Q16531 1140 aa22.24■■□□□ 1.15
CDK4-206ENST00000549606 ST20-MTHFSA0A0A6YYL1 179 aa22.23■■□□□ 1.15
CDK4-206ENST00000549606 TERF2IPQ9NYB0 399 aa22.23■■□□□ 1.15
CDK4-206ENST00000549606 USP31Q70CQ4 1352 aa22.23■■□□□ 1.15
CDK4-206ENST00000549606 USP54Q70EL1 1684 aa22.22■■□□□ 1.15
CDK4-206ENST00000549606 LTN1O94822 1766 aa22.21■■□□□ 1.15
CDK4-206ENST00000549606 PUS7Q96PZ0 661 aaKnown RBP22.21■■□□□ 1.15
CDK4-206ENST00000549606 OVOS2A0A0G2JMS6 1433 aa22.21■■□□□ 1.15
CDK4-206ENST00000549606 OVOS2A0A0J9YW53 1432 aa22.21■■□□□ 1.15
CDK4-206ENST00000549606 OVOS2Q6IE36 1432 aa22.21■■□□□ 1.15
CDK4-206ENST00000549606 LRP5O75197 1615 aa22.2■■□□□ 1.15
CDK4-206ENST00000549606 C11orf95C9JLR9 678 aaPredicted RBP22.2■■□□□ 1.14
CDK4-206ENST00000549606 TESK2Q96S53 571 aa22.2■■□□□ 1.14
CDK4-206ENST00000549606 CARD10Q9BWT7 1032 aa22.2■■□□□ 1.14
CDK4-206ENST00000549606 A0A1W2PP64 1363 aa22.2■■□□□ 1.14
CDK4-206ENST00000549606 PARD3Q8TEW0 1356 aa22.2■■□□□ 1.14
CDK4-206ENST00000549606 EDC4Q6P2E9 1401 aaKnown RBP22.2■■□□□ 1.14
CDK4-206ENST00000549606 RREB1Q92766 1687 aa22.2■■□□□ 1.14
CDK4-206ENST00000549606 PEAK1Q9H792 1746 aa22.2■■□□□ 1.14
CDK4-206ENST00000549606 CDCA7Q9BWT1 371 aaPredicted RBP22.19■■□□□ 1.14
CDK4-206ENST00000549606 SBF2Q86WG5 1849 aa22.19■■□□□ 1.14
CDK4-206ENST00000549606 ABCC6O95255 1503 aa22.17■■□□□ 1.14
CDK4-206ENST00000549606 NUP188Q5SRE5 1749 aa22.17■■□□□ 1.14
CDK4-206ENST00000549606 SLC24A1O60721 1099 aa22.15■■□□□ 1.14
CDK4-206ENST00000549606 MARCH10Q8NA82 808 aaPredicted RBP22.15■■□□□ 1.14
CDK4-206ENST00000549606 CCDC7Q96M83 1385 aa22.14■■□□□ 1.14
CDK4-206ENST00000549606 EXOC5O00471 708 aa22.14■■□□□ 1.13
CDK4-206ENST00000549606 NBPF14Q5TI25 921 aa22.14■■□□□ 1.13
CDK4-206ENST00000549606 NINLQ9Y2I6 1382 aa22.13■■□□□ 1.13
CDK4-206ENST00000549606 NLRP2Q9NX02 1062 aa22.13■■□□□ 1.13
CDK4-206ENST00000549606 ERBB3P21860 1342 aa22.12■■□□□ 1.13
CDK4-206ENST00000549606 PTF1AQ7RTS3 328 aa22.11■■□□□ 1.13
CDK4-206ENST00000549606 ANKRD24Q8TF21 1146 aa22.11■■□□□ 1.13
CDK4-206ENST00000549606 BCL11BQ9C0K0 894 aaPredicted RBP22.11■■□□□ 1.13
CDK4-206ENST00000549606 USP47Q96K76 1375 aa22.11■■□□□ 1.13
CDK4-206ENST00000549606 TMF1P82094 1093 aa22.1■■□□□ 1.13
CDK4-206ENST00000549606 RGPD3A6NKT7 1758 aaPredicted RBP22.08■■□□□ 1.13
CDK4-206ENST00000549606 RGPD4Q7Z3J3 1758 aa22.08■■□□□ 1.13
CDK4-206ENST00000549606 PLSCR1O15162 318 aa22.08■■□□□ 1.13
CDK4-206ENST00000549606 COG3Q96JB2 828 aa22.08■■□□□ 1.13
CDK4-206ENST00000549606 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
CDK4-206ENST00000549606 BCL9O00512 1426 aa22.06■■□□□ 1.12
CDK4-206ENST00000549606 TNS2Q63HR2 1409 aa22.06■■□□□ 1.12
CDK4-206ENST00000549606 IL2RBP14784 551 aa22.06■■□□□ 1.12
CDK4-206ENST00000549606 ANKRD36BQ8N2N9 1353 aa22.06■■□□□ 1.12
CDK4-206ENST00000549606 IP6K1Q92551 441 aa22.05■■□□□ 1.12
CDK4-206ENST00000549606 LTV1Q96GA3 475 aaPredicted RBP22.05■■□□□ 1.12
CDK4-206ENST00000549606 FBLN1P23142 703 aa22.03■■□□□ 1.12
CDK4-206ENST00000549606 AMPHP49418 695 aa22.02■■□□□ 1.12
CDK4-206ENST00000549606 MAP3K19Q56UN5 1328 aa22.02■■□□□ 1.12
CDK4-206ENST00000549606 FAM208AQ9UK61 1670 aaKnown RBP22.01■■□□□ 1.11
CDK4-206ENST00000549606 KCNQ2O43526 872 aa22.01■■□□□ 1.11
CDK4-206ENST00000549606 CDCA8Q53HL2 280 aa22.01■■□□□ 1.11
CDK4-206ENST00000549606 ACSBG1Q96GR2 724 aa22.01■■□□□ 1.11
CDK4-206ENST00000549606 PROM2Q8N271 834 aa22■■□□□ 1.11
CDK4-206ENST00000549606 GGNBP2Q9H3C7 697 aa22■■□□□ 1.11
CDK4-206ENST00000549606 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
CDK4-206ENST00000549606 NHSQ6T4R5 1651 aa22■■□□□ 1.11
CDK4-206ENST00000549606 HOXC9P31274 260 aa21.99■■□□□ 1.11
CDK4-206ENST00000549606 RGPD2P0DJD1 1756 aa21.98■■□□□ 1.11
CDK4-206ENST00000549606 FYB1O15117 783 aa21.98■■□□□ 1.11
CDK4-206ENST00000549606 TXNRD1Q16881 649 aa21.98■■□□□ 1.11
CDK4-206ENST00000549606 ANO8Q9HCE9 1232 aaPredicted RBP21.98■■□□□ 1.11
CDK4-206ENST00000549606 KIF20BQ96Q89 1820 aa21.97■■□□□ 1.11
CDK4-206ENST00000549606 KAT6BQ8WYB5 2073 aa21.96■■□□□ 1.11
CDK4-206ENST00000549606 RRS1Q15050 365 aaKnown RBP21.96■■□□□ 1.11
CDK4-206ENST00000549606 CLSPNQ9HAW4 1339 aa21.96■■□□□ 1.11
CDK4-206ENST00000549606 DDX54Q8TDD1 881 aaKnown RBP21.95■■□□□ 1.1
CDK4-206ENST00000549606 SPON1Q9HCB6 807 aa21.95■■□□□ 1.1
CDK4-206ENST00000549606 MYOM1P52179 1685 aa21.94■■□□□ 1.1
CDK4-206ENST00000549606 BTAF1O14981 1849 aa21.93■■□□□ 1.1
CDK4-206ENST00000549606 PPP1R1BQ9UD71 204 aaPredicted RBP21.93■■□□□ 1.1
CDK4-206ENST00000549606 STK32BQ9NY57 414 aa21.92■■□□□ 1.1
CDK4-206ENST00000549606 RTL1A6NKG5 1358 aa21.91■■□□□ 1.1
CDK4-206ENST00000549606 PDGFDQ9GZP0 370 aaPredicted RBP21.91■■□□□ 1.1
CDK4-206ENST00000549606 CASZ1Q86V15 1759 aa21.91■■□□□ 1.1
CDK4-206ENST00000549606 CARD14Q9BXL6 1004 aa21.9■■□□□ 1.1
CDK4-206ENST00000549606 SLC15A2Q16348 729 aa21.89■■□□□ 1.09
CDK4-206ENST00000549606 NBPF6Q5VWK0 638 aa21.88■■□□□ 1.09
CDK4-206ENST00000549606 USHBP1Q8N6Y0 703 aa21.88■■□□□ 1.09
CDK4-206ENST00000549606 NBPF4Q96M43 638 aa21.88■■□□□ 1.09
CDK4-206ENST00000549606 POLR3GLQ9BT43 218 aa21.88■■□□□ 1.09
CDK4-206ENST00000549606 SMG6Q86US8 1419 aaKnown RBP21.88■■□□□ 1.09
CDK4-206ENST00000549606 NSD3Q9BZ95 1437 aa21.88■■□□□ 1.09
CDK4-206ENST00000549606 ZBTB7AO95365 584 aa21.87■■□□□ 1.09
CDK4-206ENST00000549606 ZCRB1Q8TBF4 217 aaKnown RBP21.87■■□□□ 1.09
CDK4-206ENST00000549606 SHANK3Q9BYB0 1731 aa21.86■■□□□ 1.09
CDK4-206ENST00000549606 HSP90AB2PQ58FF8 381 aa21.86■■□□□ 1.09
CDK4-206ENST00000549606 CCER1Q8TC90 406 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms