RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
SMARCD1-207ENST00000549526 LRRC37A3O60309 1634 aa12.56□□□□□ -0.4
SMARCD1-207ENST00000549526 JMYQ8N9B5 988 aa12.56□□□□□ -0.4
SMARCD1-207ENST00000549526 ADCY9O60503 1353 aa12.56□□□□□ -0.4
SMARCD1-207ENST00000549526 CRB1P82279 1406 aa12.55□□□□□ -0.4
SMARCD1-207ENST00000549526 TOMM70O94826 608 aa12.55□□□□□ -0.4
SMARCD1-207ENST00000549526 HIRIP3Q9BW71 556 aaPredicted RBP12.55□□□□□ -0.4
SMARCD1-207ENST00000549526 AATKQ6ZMQ8 1374 aa12.55□□□□□ -0.4
SMARCD1-207ENST00000549526 WDR90Q96KV7 1748 aa12.54□□□□□ -0.4
SMARCD1-207ENST00000549526 HTRA3P83110 453 aa12.54□□□□□ -0.4
SMARCD1-207ENST00000549526 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
SMARCD1-207ENST00000549526 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
SMARCD1-207ENST00000549526 LMO7Q8WWI1 1683 aa12.53□□□□□ -0.4
SMARCD1-207ENST00000549526 PRR36Q9H6K5 1346 aa12.53□□□□□ -0.4
SMARCD1-207ENST00000549526 COL24A1Q17RW2 1714 aa12.52□□□□□ -0.41
SMARCD1-207ENST00000549526 ZBTB7CA1YPR0 619 aa12.52□□□□□ -0.41
SMARCD1-207ENST00000549526 ANKRD30BQ9BXX2 1392 aa12.52□□□□□ -0.41
SMARCD1-207ENST00000549526 BCL9O00512 1426 aa12.52□□□□□ -0.41
SMARCD1-207ENST00000549526 COL5A2P05997 1499 aaPredicted RBP12.52□□□□□ -0.41
SMARCD1-207ENST00000549526 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
SMARCD1-207ENST00000549526 CPDO75976 1380 aa12.51□□□□□ -0.41
SMARCD1-207ENST00000549526 EIF3AQ14152 1382 aaKnown RBP12.51□□□□□ -0.41
SMARCD1-207ENST00000549526 EXOC5O00471 708 aa12.5□□□□□ -0.41
SMARCD1-207ENST00000549526 CDCA7Q9BWT1 371 aaPredicted RBP12.5□□□□□ -0.41
SMARCD1-207ENST00000549526 MINK1Q8N4C8 1332 aaPredicted RBP12.5□□□□□ -0.41
SMARCD1-207ENST00000549526 PAPPAQ13219 1627 aa12.5□□□□□ -0.41
SMARCD1-207ENST00000549526 KAT6BQ8WYB5 2073 aa12.5□□□□□ -0.41
SMARCD1-207ENST00000549526 PIK3C2GO75747 1445 aa12.49□□□□□ -0.41
SMARCD1-207ENST00000549526 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
SMARCD1-207ENST00000549526 TFCP2L1Q9NZI6 479 aa12.49□□□□□ -0.41
SMARCD1-207ENST00000549526 ARHGEF28Q8N1W1 1705 aaKnown RBP12.48□□□□□ -0.41
SMARCD1-207ENST00000549526 PNPLA7Q6ZV29 1317 aa12.48□□□□□ -0.41
SMARCD1-207ENST00000549526 WASLO00401 505 aaPredicted RBP12.48□□□□□ -0.41
SMARCD1-207ENST00000549526 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
SMARCD1-207ENST00000549526 C14orf93Q9H972 538 aaKnown RBP12.48□□□□□ -0.41
SMARCD1-207ENST00000549526 LRRC4BQ9NT99 713 aa12.48□□□□□ -0.41
SMARCD1-207ENST00000549526 MSH5O43196 834 aa12.47□□□□□ -0.41
SMARCD1-207ENST00000549526 GCP02774 474 aa12.47□□□□□ -0.41
SMARCD1-207ENST00000549526 CFAP70Q5T0N1 1121 aa12.47□□□□□ -0.41
SMARCD1-207ENST00000549526 QSER1Q2KHR3 1735 aa12.47□□□□□ -0.41
SMARCD1-207ENST00000549526 TULP4Q9NRJ4 1543 aa12.47□□□□□ -0.41
SMARCD1-207ENST00000549526 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.42
SMARCD1-207ENST00000549526 HSPA1AP0DMV8 641 aaKnown RBP12.45□□□□□ -0.42
SMARCD1-207ENST00000549526 HSPA1BP0DMV9 641 aaKnown RBP12.45□□□□□ -0.42
SMARCD1-207ENST00000549526 NLRP13Q86W25 1043 aa12.45□□□□□ -0.42
SMARCD1-207ENST00000549526 C16orf71Q8IYS4 520 aaPredicted RBP12.45□□□□□ -0.42
SMARCD1-207ENST00000549526 SLC4A1APQ9BWU0 796 aaKnown RBP12.45□□□□□ -0.42
SMARCD1-207ENST00000549526 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
SMARCD1-207ENST00000549526 CD2APQ9Y5K6 639 aa12.44□□□□□ -0.42
SMARCD1-207ENST00000549526 BTAF1O14981 1849 aa12.44□□□□□ -0.42
SMARCD1-207ENST00000549526 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
SMARCD1-207ENST00000549526 ITSN1Q15811 1721 aa12.43□□□□□ -0.42
SMARCD1-207ENST00000549526 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
SMARCD1-207ENST00000549526 NUDT16Q96DE0 195 aaKnown RBP12.43□□□□□ -0.42
SMARCD1-207ENST00000549526 TRAK1Q9UPV9 953 aa12.43□□□□□ -0.42
SMARCD1-207ENST00000549526 TUBGCP6Q96RT7 1819 aa12.42□□□□□ -0.42
SMARCD1-207ENST00000549526 SLC27A3Q5K4L6 730 aa12.42□□□□□ -0.42
SMARCD1-207ENST00000549526 NMRK2Q9NPI5 230 aa12.42□□□□□ -0.42
SMARCD1-207ENST00000549526 USP6P35125 1406 aa12.42□□□□□ -0.42
SMARCD1-207ENST00000549526 USP19O94966 1318 aa12.41□□□□□ -0.42
SMARCD1-207ENST00000549526 ACEP12821 1306 aa12.41□□□□□ -0.42
SMARCD1-207ENST00000549526 WDR17Q8IZU2 1322 aa12.41□□□□□ -0.42
SMARCD1-207ENST00000549526 KCNQ4P56696 695 aa12.41□□□□□ -0.42
SMARCD1-207ENST00000549526 MSL1Q68DK7 614 aa12.41□□□□□ -0.42
SMARCD1-207ENST00000549526 SPATA31E1Q6ZUB1 1445 aa12.4□□□□□ -0.42
SMARCD1-207ENST00000549526 CSB-PGBD3P0DP91 1061 aa12.4□□□□□ -0.42
SMARCD1-207ENST00000549526 FSTL1Q12841 308 aa12.4□□□□□ -0.42
SMARCD1-207ENST00000549526 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
SMARCD1-207ENST00000549526 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
SMARCD1-207ENST00000549526 COL23A1Q86Y22 540 aaPredicted RBP12.38□□□□□ -0.43
SMARCD1-207ENST00000549526 CARD10Q9BWT7 1032 aa12.38□□□□□ -0.43
SMARCD1-207ENST00000549526 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
SMARCD1-207ENST00000549526 IGSF1Q8N6C5 1336 aa12.37□□□□□ -0.43
SMARCD1-207ENST00000549526 POLR3AO14802 1390 aaPredicted RBP12.36□□□□□ -0.43
SMARCD1-207ENST00000549526 NLRP6P59044 892 aa12.35□□□□□ -0.43
SMARCD1-207ENST00000549526 COL18A1P39060 1754 aa12.35□□□□□ -0.43
SMARCD1-207ENST00000549526 TNS2Q63HR2 1409 aa12.35□□□□□ -0.43
SMARCD1-207ENST00000549526 CDK19Q9BWU1 502 aa12.34□□□□□ -0.43
SMARCD1-207ENST00000549526 CCDC61Q9Y6R9 512 aa12.34□□□□□ -0.43
SMARCD1-207ENST00000549526 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
SMARCD1-207ENST00000549526 TRPM1Q7Z4N2 1603 aa12.32□□□□□ -0.44
SMARCD1-207ENST00000549526 CCDC7Q96M83 1385 aa12.31□□□□□ -0.44
SMARCD1-207ENST00000549526 ARHGAP27Q6ZUM4 889 aa12.31□□□□□ -0.44
SMARCD1-207ENST00000549526 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
SMARCD1-207ENST00000549526 PIK3C2AO00443 1686 aa12.3□□□□□ -0.44
SMARCD1-207ENST00000549526 MLLT1Q03111 559 aaPredicted RBP12.3□□□□□ -0.44
SMARCD1-207ENST00000549526 SMC1BQ8NDV3 1235 aa12.3□□□□□ -0.44
SMARCD1-207ENST00000549526 RRAGCQ9HB90 399 aa12.3□□□□□ -0.44
SMARCD1-207ENST00000549526 ABCC6O95255 1503 aa12.3□□□□□ -0.44
SMARCD1-207ENST00000549526 PPIP5K1Q6PFW1 1433 aa12.29□□□□□ -0.44
SMARCD1-207ENST00000549526 CCNL1Q9UK58 526 aaPredicted RBP12.29□□□□□ -0.44
SMARCD1-207ENST00000549526 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
SMARCD1-207ENST00000549526 SOX12O15370 315 aa12.28□□□□□ -0.44
SMARCD1-207ENST00000549526 IL2RBP14784 551 aa12.28□□□□□ -0.44
SMARCD1-207ENST00000549526 ARHGEF25Q86VW2 580 aa12.28□□□□□ -0.44
SMARCD1-207ENST00000549526 ADGRB1O14514 1584 aa12.27□□□□□ -0.44
SMARCD1-207ENST00000549526 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
SMARCD1-207ENST00000549526 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.45
SMARCD1-207ENST00000549526 NLRP2Q9NX02 1062 aa12.27□□□□□ -0.45
SMARCD1-207ENST00000549526 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms