RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MAPK8IP3Q9UPT6 1336 aa12.96□□□□□ -0.33
RAB5B-206ENST00000549505 ALDH1L2Q3SY69 923 aa12.96□□□□□ -0.34
RAB5B-206ENST00000549505 PLPPR3Q6T4P5 718 aa12.95□□□□□ -0.34
RAB5B-206ENST00000549505 EMILIN1Q9Y6C2 1016 aa12.95□□□□□ -0.34
RAB5B-206ENST00000549505 ABCC6O95255 1503 aa12.95□□□□□ -0.34
RAB5B-206ENST00000549505 FLT4P35916 1363 aa12.95□□□□□ -0.34
RAB5B-206ENST00000549505 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
RAB5B-206ENST00000549505 PLIN1O60240 522 aa12.94□□□□□ -0.34
RAB5B-206ENST00000549505 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
RAB5B-206ENST00000549505 IFT57Q9NWB7 429 aa12.94□□□□□ -0.34
RAB5B-206ENST00000549505 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
RAB5B-206ENST00000549505 BCAR3O75815 825 aa12.93□□□□□ -0.34
RAB5B-206ENST00000549505 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
RAB5B-206ENST00000549505 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
RAB5B-206ENST00000549505 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
RAB5B-206ENST00000549505 RIPK4P57078 832 aa12.92□□□□□ -0.34
RAB5B-206ENST00000549505 LMO7Q8WWI1 1683 aa12.92□□□□□ -0.34
RAB5B-206ENST00000549505 U2SURPO15042 1029 aaKnown RBP12.92□□□□□ -0.34
RAB5B-206ENST00000549505 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
RAB5B-206ENST00000549505 IGSF1Q8N6C5 1336 aa12.92□□□□□ -0.34
RAB5B-206ENST00000549505 RRP7AQ9Y3A4 280 aaKnown RBP12.91□□□□□ -0.34
RAB5B-206ENST00000549505 VIRMAQ69YN4 1812 aaKnown RBP12.91□□□□□ -0.34
RAB5B-206ENST00000549505 LTN1O94822 1766 aa12.91□□□□□ -0.34
RAB5B-206ENST00000549505 ARHGAP45Q92619 1136 aa12.91□□□□□ -0.34
RAB5B-206ENST00000549505 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.34
RAB5B-206ENST00000549505 STRCP1A6NGW2 1772 aa12.9□□□□□ -0.34
RAB5B-206ENST00000549505 KIAA0232Q92628 1395 aa12.9□□□□□ -0.34
RAB5B-206ENST00000549505 PHACTR3Q96KR7 559 aa12.9□□□□□ -0.34
RAB5B-206ENST00000549505 CRB1P82279 1406 aa12.89□□□□□ -0.35
RAB5B-206ENST00000549505 HTATSF1O43719 755 aaKnown RBP12.89□□□□□ -0.35
RAB5B-206ENST00000549505 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
RAB5B-206ENST00000549505 ADAMTS7Q9UKP4 1686 aa12.89□□□□□ -0.35
RAB5B-206ENST00000549505 CRYBG1Q9Y4K1 1723 aa12.89□□□□□ -0.35
RAB5B-206ENST00000549505 MAP3K19Q56UN5 1328 aa12.89□□□□□ -0.35
RAB5B-206ENST00000549505 GNAI1P63096 354 aa12.88□□□□□ -0.35
RAB5B-206ENST00000549505 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
RAB5B-206ENST00000549505 N4BP2Q86UW6 1770 aaPredicted RBP12.88□□□□□ -0.35
RAB5B-206ENST00000549505 USP19O94966 1318 aa12.87□□□□□ -0.35
RAB5B-206ENST00000549505 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
RAB5B-206ENST00000549505 CLUAP1Q96AJ1 413 aa12.87□□□□□ -0.35
RAB5B-206ENST00000549505 NEFMP07197 916 aa12.86□□□□□ -0.35
RAB5B-206ENST00000549505 EXOSC9Q06265 439 aaKnown RBP12.86□□□□□ -0.35
RAB5B-206ENST00000549505 RRS1Q15050 365 aaKnown RBP12.86□□□□□ -0.35
RAB5B-206ENST00000549505 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
RAB5B-206ENST00000549505 SOS1Q07889 1333 aaPredicted RBP12.86□□□□□ -0.35
RAB5B-206ENST00000549505 ZKSCAN2Q63HK3 967 aa12.86□□□□□ -0.35
RAB5B-206ENST00000549505 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
RAB5B-206ENST00000549505 OVOS2A0A0G2JMS6 1433 aa12.86□□□□□ -0.35
RAB5B-206ENST00000549505 MVPQ14764 893 aaKnown RBP12.86□□□□□ -0.35
RAB5B-206ENST00000549505 FBLN1P23142 703 aa12.85□□□□□ -0.35
RAB5B-206ENST00000549505 C1orf167Q5SNV9 1468 aa12.85□□□□□ -0.35
RAB5B-206ENST00000549505 VAMP4O75379 141 aa12.84□□□□□ -0.35
RAB5B-206ENST00000549505 BACH2Q9BYV9 841 aa12.84□□□□□ -0.35
RAB5B-206ENST00000549505 XIRP1Q702N8 1843 aaKnown RBP12.84□□□□□ -0.35
RAB5B-206ENST00000549505 CHL1O00533 1208 aa12.84□□□□□ -0.35
RAB5B-206ENST00000549505 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
RAB5B-206ENST00000549505 FAM208AQ9UK61 1670 aaKnown RBP12.84□□□□□ -0.35
RAB5B-206ENST00000549505 NGDNQ8NEJ9 315 aaKnown RBP12.84□□□□□ -0.35
RAB5B-206ENST00000549505 PMFBP1Q8TBY8 1022 aa12.84□□□□□ -0.35
RAB5B-206ENST00000549505 SSH1Q8WYL5 1049 aa12.84□□□□□ -0.35
RAB5B-206ENST00000549505 RLBP1P12271 317 aa12.83□□□□□ -0.36
RAB5B-206ENST00000549505 ATF7IPQ6VMQ6 1270 aa12.83□□□□□ -0.36
RAB5B-206ENST00000549505 HOXC9P31274 260 aa12.83□□□□□ -0.36
RAB5B-206ENST00000549505 TSR2Q969E8 191 aaKnown RBP12.83□□□□□ -0.36
RAB5B-206ENST00000549505 HDAC1Q13547 482 aaPredicted RBP12.82□□□□□ -0.36
RAB5B-206ENST00000549505 IPO8O15397 1037 aaKnown RBP12.82□□□□□ -0.36
RAB5B-206ENST00000549505 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
RAB5B-206ENST00000549505 DZIP1LQ8IYY4 767 aaKnown RBP12.82□□□□□ -0.36
RAB5B-206ENST00000549505 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
RAB5B-206ENST00000549505 COL18A1P39060 1754 aa12.82□□□□□ -0.36
RAB5B-206ENST00000549505 STRCQ7RTU9 1775 aa12.82□□□□□ -0.36
RAB5B-206ENST00000549505 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
RAB5B-206ENST00000549505 ERICH6Q7L0X2 663 aa12.82□□□□□ -0.36
RAB5B-206ENST00000549505 ABCC4O15439 1325 aa12.81□□□□□ -0.36
RAB5B-206ENST00000549505 KCNH5Q8NCM2 988 aa12.81□□□□□ -0.36
RAB5B-206ENST00000549505 MBIPQ9NS73 344 aa12.81□□□□□ -0.36
RAB5B-206ENST00000549505 KDM3BQ7LBC6 1761 aa12.81□□□□□ -0.36
RAB5B-206ENST00000549505 HMOX1P09601 288 aa12.81□□□□□ -0.36
RAB5B-206ENST00000549505 TRIM27P14373 513 aa12.81□□□□□ -0.36
RAB5B-206ENST00000549505 IP6K1Q92551 441 aa12.81□□□□□ -0.36
RAB5B-206ENST00000549505 PANK1Q8TE04 598 aa12.8□□□□□ -0.36
RAB5B-206ENST00000549505 DDX19BQ9UMR2 479 aa12.8□□□□□ -0.36
RAB5B-206ENST00000549505 RGS12O14924 1447 aa12.8□□□□□ -0.36
RAB5B-206ENST00000549505 SULT6B1Q6IMI4 303 aa12.79□□□□□ -0.36
RAB5B-206ENST00000549505 MSH6P52701 1360 aa12.79□□□□□ -0.36
RAB5B-206ENST00000549505 IGHDP01880 384 aa12.79□□□□□ -0.36
RAB5B-206ENST00000549505 CHMP4BQ9H444 224 aaKnown RBP12.79□□□□□ -0.36
RAB5B-206ENST00000549505 SIPA1L3O60292 1781 aaPredicted RBP12.79□□□□□ -0.36
RAB5B-206ENST00000549505 PDE4AP27815 886 aa12.79□□□□□ -0.36
RAB5B-206ENST00000549505 GAS2L2Q8NHY3 880 aa12.79□□□□□ -0.36
RAB5B-206ENST00000549505 EYA1Q99502 592 aa12.79□□□□□ -0.36
RAB5B-206ENST00000549505 C19orf44Q9H6X5 657 aa12.79□□□□□ -0.36
RAB5B-206ENST00000549505 ANO8Q9HCE9 1232 aaPredicted RBP12.79□□□□□ -0.36
RAB5B-206ENST00000549505 ZBTB40Q9NUA8 1239 aa12.79□□□□□ -0.36
RAB5B-206ENST00000549505 CEMIPQ8WUJ3 1361 aa12.78□□□□□ -0.36
RAB5B-206ENST00000549505 AEBP1Q8IUX7 1158 aa12.78□□□□□ -0.36
RAB5B-206ENST00000549505 PPM1GO15355 546 aaPredicted RBP12.78□□□□□ -0.36
RAB5B-206ENST00000549505 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
RAB5B-206ENST00000549505 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
RAB5B-206ENST00000549505 CACNA1FO60840 1977 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms