RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 OVOS2Q6IE36 1432 aa29.04■■■□□ 2.24
SSH1-207ENST00000547862 PARD3Q8TEW0 1356 aa29.04■■■□□ 2.24
SSH1-207ENST00000547862 NFAT5O94916 1531 aa29.04■■■□□ 2.24
SSH1-207ENST00000547862 LTN1O94822 1766 aa29.01■■■□□ 2.23
SSH1-207ENST00000547862 TTC21AQ8NDW8 1320 aa29.01■■■□□ 2.23
SSH1-207ENST00000547862 ZNF692Q9BU19 519 aaPredicted RBP29.01■■■□□ 2.23
SSH1-207ENST00000547862 CARD11Q9BXL7 1154 aa29.01■■■□□ 2.23
SSH1-207ENST00000547862 AXIN2Q9Y2T1 843 aa29.01■■■□□ 2.23
SSH1-207ENST00000547862 WDR17Q8IZU2 1322 aa29■■■□□ 2.23
SSH1-207ENST00000547862 CSB-PGBD3P0DP91 1061 aa29■■■□□ 2.23
SSH1-207ENST00000547862 DDB1Q16531 1140 aa28.99■■■□□ 2.23
SSH1-207ENST00000547862 TONSLQ96HA7 1378 aa28.99■■■□□ 2.23
SSH1-207ENST00000547862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.98■■■□□ 2.23
SSH1-207ENST00000547862 KCNH5Q8NCM2 988 aa28.98■■■□□ 2.23
SSH1-207ENST00000547862 USP54Q70EL1 1684 aa28.97■■■□□ 2.23
SSH1-207ENST00000547862 ARHGEF25Q86VW2 580 aa28.97■■■□□ 2.23
SSH1-207ENST00000547862 RGPD3A6NKT7 1758 aaPredicted RBP28.97■■■□□ 2.23
SSH1-207ENST00000547862 RGPD4Q7Z3J3 1758 aa28.97■■■□□ 2.23
SSH1-207ENST00000547862 SBNO2Q9Y2G9 1366 aa28.96■■■□□ 2.23
SSH1-207ENST00000547862 TMC1Q8TDI8 760 aa28.95■■■□□ 2.22
SSH1-207ENST00000547862 CD163L1Q9NR16 1453 aa28.93■■■□□ 2.22
SSH1-207ENST00000547862 ABCC6O95255 1503 aa28.91■■■□□ 2.22
SSH1-207ENST00000547862 NBPF14Q5TI25 921 aa28.91■■■□□ 2.22
SSH1-207ENST00000547862 NME9Q86XW9 330 aa28.91■■■□□ 2.22
SSH1-207ENST00000547862 C11orf95C9JLR9 678 aaPredicted RBP28.89■■■□□ 2.22
SSH1-207ENST00000547862 PTF1AQ7RTS3 328 aa28.87■■■□□ 2.21
SSH1-207ENST00000547862 HDGFL2Q7Z4V5 671 aaPredicted RBP28.87■■■□□ 2.21
SSH1-207ENST00000547862 MARCH10Q8NA82 808 aaPredicted RBP28.87■■■□□ 2.21
SSH1-207ENST00000547862 CARD10Q9BWT7 1032 aa28.87■■■□□ 2.21
SSH1-207ENST00000547862 CDCA7Q9BWT1 371 aaPredicted RBP28.85■■■□□ 2.21
SSH1-207ENST00000547862 SLC12A5Q9H2X9 1139 aa28.85■■■□□ 2.21
SSH1-207ENST00000547862 CCDC7Q96M83 1385 aa28.85■■■□□ 2.21
SSH1-207ENST00000547862 TNS2Q63HR2 1409 aa28.85■■■□□ 2.21
SSH1-207ENST00000547862 A0A1W2PP64 1363 aa28.84■■■□□ 2.21
SSH1-207ENST00000547862 USP31Q70CQ4 1352 aa28.84■■■□□ 2.21
SSH1-207ENST00000547862 EDC4Q6P2E9 1401 aaKnown RBP28.84■■■□□ 2.21
SSH1-207ENST00000547862 NHSQ6T4R5 1651 aa28.81■■■□□ 2.2
SSH1-207ENST00000547862 BCL11BQ9C0K0 894 aaPredicted RBP28.81■■■□□ 2.2
SSH1-207ENST00000547862 NLRP2Q9NX02 1062 aa28.8■■■□□ 2.2
SSH1-207ENST00000547862 CASZ1Q86V15 1759 aa28.8■■■□□ 2.2
SSH1-207ENST00000547862 ERBB3P21860 1342 aa28.79■■■□□ 2.2
SSH1-207ENST00000547862 EXOC5O00471 708 aa28.79■■■□□ 2.2
SSH1-207ENST00000547862 ANO8Q9HCE9 1232 aaPredicted RBP28.79■■■□□ 2.2
SSH1-207ENST00000547862 TERF2IPQ9NYB0 399 aa28.78■■■□□ 2.2
SSH1-207ENST00000547862 KAT6BQ8WYB5 2073 aa28.76■■■□□ 2.19
SSH1-207ENST00000547862 PLSCR1O15162 318 aa28.76■■■□□ 2.19
SSH1-207ENST00000547862 PPP1R1BQ9UD71 204 aaPredicted RBP28.76■■■□□ 2.19
SSH1-207ENST00000547862 FAM208AQ9UK61 1670 aaKnown RBP28.76■■■□□ 2.19
SSH1-207ENST00000547862 BCL9O00512 1426 aa28.76■■■□□ 2.19
SSH1-207ENST00000547862 ANKRD24Q8TF21 1146 aa28.75■■■□□ 2.19
SSH1-207ENST00000547862 SPON1Q9HCB6 807 aa28.74■■■□□ 2.19
SSH1-207ENST00000547862 BTAF1O14981 1849 aa28.73■■■□□ 2.19
SSH1-207ENST00000547862 ACSBG1Q96GR2 724 aa28.73■■■□□ 2.19
SSH1-207ENST00000547862 ST20-MTHFSA0A0A6YYL1 179 aa28.72■■■□□ 2.19
SSH1-207ENST00000547862 RGPD2P0DJD1 1756 aa28.72■■■□□ 2.19
SSH1-207ENST00000547862 KCNQ2O43526 872 aa28.71■■■□□ 2.19
SSH1-207ENST00000547862 IL2RBP14784 551 aa28.7■■■□□ 2.18
SSH1-207ENST00000547862 LTV1Q96GA3 475 aaPredicted RBP28.7■■■□□ 2.18
SSH1-207ENST00000547862 TESK2Q96S53 571 aa28.69■■■□□ 2.18
SSH1-207ENST00000547862 MYOM1P52179 1685 aa28.68■■■□□ 2.18
SSH1-207ENST00000547862 PROM2Q8N271 834 aa28.68■■■□□ 2.18
SSH1-207ENST00000547862 NINLQ9Y2I6 1382 aa28.67■■■□□ 2.18
SSH1-207ENST00000547862 TXNRD1Q16881 649 aa28.67■■■□□ 2.18
SSH1-207ENST00000547862 PDGFDQ9GZP0 370 aaPredicted RBP28.67■■■□□ 2.18
SSH1-207ENST00000547862 KIF20BQ96Q89 1820 aa28.64■■■□□ 2.18
SSH1-207ENST00000547862 ZBTB7AO95365 584 aa28.64■■■□□ 2.18
SSH1-207ENST00000547862 PUS7Q96PZ0 661 aaKnown RBP28.64■■■□□ 2.18
SSH1-207ENST00000547862 STK32BQ9NY57 414 aa28.64■■■□□ 2.18
SSH1-207ENST00000547862 DOT1LQ8TEK3 1739 aa28.63■■■□□ 2.17
SSH1-207ENST00000547862 COG3Q96JB2 828 aa28.63■■■□□ 2.17
SSH1-207ENST00000547862 USP47Q96K76 1375 aa28.62■■■□□ 2.17
SSH1-207ENST00000547862 PAPPAQ13219 1627 aa28.61■■■□□ 2.17
SSH1-207ENST00000547862 SHANK3Q9BYB0 1731 aa28.6■■■□□ 2.17
SSH1-207ENST00000547862 FBLN1P23142 703 aa28.6■■■□□ 2.17
SSH1-207ENST00000547862 IP6K1Q92551 441 aa28.6■■■□□ 2.17
SSH1-207ENST00000547862 ANKRD36BQ8N2N9 1353 aa28.6■■■□□ 2.17
SSH1-207ENST00000547862 TRIM26Q12899 539 aaPredicted RBP28.59■■■□□ 2.17
SSH1-207ENST00000547862 MAP3K19Q56UN5 1328 aa28.59■■■□□ 2.17
SSH1-207ENST00000547862 AMPHP49418 695 aa28.58■■■□□ 2.17
SSH1-207ENST00000547862 SLC15A2Q16348 729 aa28.57■■■□□ 2.16
SSH1-207ENST00000547862 DDX54Q8TDD1 881 aaKnown RBP28.57■■■□□ 2.16
SSH1-207ENST00000547862 ATF5Q9Y2D1 282 aaPredicted RBP28.57■■■□□ 2.16
SSH1-207ENST00000547862 HOXC9P31274 260 aa28.55■■■□□ 2.16
SSH1-207ENST00000547862 TMF1P82094 1093 aa28.54■■■□□ 2.16
SSH1-207ENST00000547862 RRS1Q15050 365 aaKnown RBP28.52■■■□□ 2.16
SSH1-207ENST00000547862 GGNBP2Q9H3C7 697 aa28.52■■■□□ 2.16
SSH1-207ENST00000547862 MEGF6O75095 1541 aa28.52■■■□□ 2.16
SSH1-207ENST00000547862 TUBGCP6Q96RT7 1819 aa28.51■■■□□ 2.15
SSH1-207ENST00000547862 DCAF8L1A6NGE4 600 aa28.51■■■□□ 2.15
SSH1-207ENST00000547862 SLC24A1O60721 1099 aa28.51■■■□□ 2.15
SSH1-207ENST00000547862 YY1P25490 414 aa28.5■■■□□ 2.15
SSH1-207ENST00000547862 SYTL4Q96C24 671 aaPredicted RBP28.5■■■□□ 2.15
SSH1-207ENST00000547862 RTL1A6NKG5 1358 aa28.5■■■□□ 2.15
SSH1-207ENST00000547862 PTGER2P43116 358 aa28.48■■■□□ 2.15
SSH1-207ENST00000547862 SMG6Q86US8 1419 aaKnown RBP28.47■■■□□ 2.15
SSH1-207ENST00000547862 ZNF827Q17R98 1081 aa28.47■■■□□ 2.15
SSH1-207ENST00000547862 USHBP1Q8N6Y0 703 aa28.47■■■□□ 2.15
SSH1-207ENST00000547862 LY75O60449 1722 aa28.46■■■□□ 2.15
SSH1-207ENST00000547862 QSER1Q2KHR3 1735 aa28.46■■■□□ 2.15
SSH1-207ENST00000547862 MTFR1LQ9H019 292 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms