RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 CD163L1Q9NR16 1453 aa20.29■□□□□ 0.84
TROAP-203ENST00000546735 NME9Q86XW9 330 aa20.28■□□□□ 0.84
TROAP-203ENST00000546735 WDR17Q8IZU2 1322 aa20.27■□□□□ 0.84
TROAP-203ENST00000546735 CSB-PGBD3P0DP91 1061 aa20.27■□□□□ 0.84
TROAP-203ENST00000546735 PARP4Q9UKK3 1724 aaKnown RBP20.27■□□□□ 0.83
TROAP-203ENST00000546735 MON2Q7Z3U7 1717 aa20.26■□□□□ 0.83
TROAP-203ENST00000546735 NFAT5O94916 1531 aa20.26■□□□□ 0.83
TROAP-203ENST00000546735 DDB1Q16531 1140 aa20.25■□□□□ 0.83
TROAP-203ENST00000546735 HDGFL2Q7Z4V5 671 aaPredicted RBP20.25■□□□□ 0.83
TROAP-203ENST00000546735 USP31Q70CQ4 1352 aa20.23■□□□□ 0.83
TROAP-203ENST00000546735 ST20-MTHFSA0A0A6YYL1 179 aa20.23■□□□□ 0.83
TROAP-203ENST00000546735 LRRC37A3O60309 1634 aa20.23■□□□□ 0.83
TROAP-203ENST00000546735 A0A1W2PP64 1363 aa20.22■□□□□ 0.83
TROAP-203ENST00000546735 TESK2Q96S53 571 aa20.22■□□□□ 0.83
TROAP-203ENST00000546735 RGPD5Q99666 1765 aa20.21■□□□□ 0.83
TROAP-203ENST00000546735 OVOS2A0A0G2JMS6 1433 aa20.21■□□□□ 0.83
TROAP-203ENST00000546735 OVOS2A0A0J9YW53 1432 aa20.21■□□□□ 0.83
TROAP-203ENST00000546735 OVOS2Q6IE36 1432 aa20.21■□□□□ 0.83
TROAP-203ENST00000546735 CARD10Q9BWT7 1032 aa20.21■□□□□ 0.83
TROAP-203ENST00000546735 MARCH10Q8NA82 808 aaPredicted RBP20.2■□□□□ 0.82
TROAP-203ENST00000546735 TERF2IPQ9NYB0 399 aa20.2■□□□□ 0.82
TROAP-203ENST00000546735 LRP5O75197 1615 aa20.2■□□□□ 0.82
TROAP-203ENST00000546735 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.82
TROAP-203ENST00000546735 PEAK1Q9H792 1746 aa20.19■□□□□ 0.82
TROAP-203ENST00000546735 PTF1AQ7RTS3 328 aa20.19■□□□□ 0.82
TROAP-203ENST00000546735 EDC4Q6P2E9 1401 aaKnown RBP20.19■□□□□ 0.82
TROAP-203ENST00000546735 PUS7Q96PZ0 661 aaKnown RBP20.18■□□□□ 0.82
TROAP-203ENST00000546735 CDCA7Q9BWT1 371 aaPredicted RBP20.17■□□□□ 0.82
TROAP-203ENST00000546735 WNK3Q9BYP7 1800 aa20.17■□□□□ 0.82
TROAP-203ENST00000546735 RREB1Q92766 1687 aa20.16■□□□□ 0.82
TROAP-203ENST00000546735 C11orf95C9JLR9 678 aaPredicted RBP20.16■□□□□ 0.82
TROAP-203ENST00000546735 USP54Q70EL1 1684 aa20.16■□□□□ 0.82
TROAP-203ENST00000546735 NLRP2Q9NX02 1062 aa20.15■□□□□ 0.82
TROAP-203ENST00000546735 CCDC7Q96M83 1385 aa20.15■□□□□ 0.82
TROAP-203ENST00000546735 NUP188Q5SRE5 1749 aa20.15■□□□□ 0.82
TROAP-203ENST00000546735 ABCC6O95255 1503 aa20.14■□□□□ 0.81
TROAP-203ENST00000546735 ERBB3P21860 1342 aa20.14■□□□□ 0.81
TROAP-203ENST00000546735 EXOC5O00471 708 aa20.14■□□□□ 0.81
TROAP-203ENST00000546735 NBPF14Q5TI25 921 aa20.14■□□□□ 0.81
TROAP-203ENST00000546735 ANKRD24Q8TF21 1146 aa20.13■□□□□ 0.81
TROAP-203ENST00000546735 BCL11BQ9C0K0 894 aaPredicted RBP20.13■□□□□ 0.81
TROAP-203ENST00000546735 LTN1O94822 1766 aa20.11■□□□□ 0.81
TROAP-203ENST00000546735 USP47Q96K76 1375 aa20.11■□□□□ 0.81
TROAP-203ENST00000546735 NINLQ9Y2I6 1382 aa20.1■□□□□ 0.81
TROAP-203ENST00000546735 PLSCR1O15162 318 aa20.1■□□□□ 0.81
TROAP-203ENST00000546735 FBLN1P23142 703 aa20.1■□□□□ 0.81
TROAP-203ENST00000546735 SBF2Q86WG5 1849 aa20.1■□□□□ 0.81
TROAP-203ENST00000546735 TNS2Q63HR2 1409 aa20.1■□□□□ 0.81
TROAP-203ENST00000546735 LTV1Q96GA3 475 aaPredicted RBP20.09■□□□□ 0.81
TROAP-203ENST00000546735 BCL9O00512 1426 aa20.09■□□□□ 0.81
TROAP-203ENST00000546735 KCNQ2O43526 872 aa20.08■□□□□ 0.81
TROAP-203ENST00000546735 SLC24A1O60721 1099 aa20.08■□□□□ 0.81
TROAP-203ENST00000546735 IL2RBP14784 551 aa20.08■□□□□ 0.81
TROAP-203ENST00000546735 TMF1P82094 1093 aa20.08■□□□□ 0.81
TROAP-203ENST00000546735 PROM2Q8N271 834 aa20.08■□□□□ 0.81
TROAP-203ENST00000546735 IP6K1Q92551 441 aa20.08■□□□□ 0.81
TROAP-203ENST00000546735 COG3Q96JB2 828 aa20.08■□□□□ 0.81
TROAP-203ENST00000546735 ACSBG1Q96GR2 724 aa20.07■□□□□ 0.8
TROAP-203ENST00000546735 ANO8Q9HCE9 1232 aaPredicted RBP20.07■□□□□ 0.8
TROAP-203ENST00000546735 ANKRD36BQ8N2N9 1353 aa20.07■□□□□ 0.8
TROAP-203ENST00000546735 PCGF6Q9BYE7 350 aa20.06■□□□□ 0.8
TROAP-203ENST00000546735 MAP3K19Q56UN5 1328 aa20.05■□□□□ 0.8
TROAP-203ENST00000546735 GGNBP2Q9H3C7 697 aa20.04■□□□□ 0.8
TROAP-203ENST00000546735 HOXC9P31274 260 aa20.03■□□□□ 0.8
TROAP-203ENST00000546735 TXNRD1Q16881 649 aa20.03■□□□□ 0.8
TROAP-203ENST00000546735 RGPD3A6NKT7 1758 aaPredicted RBP20.03■□□□□ 0.8
TROAP-203ENST00000546735 RGPD4Q7Z3J3 1758 aa20.03■□□□□ 0.8
TROAP-203ENST00000546735 FYB1O15117 783 aa20.02■□□□□ 0.8
TROAP-203ENST00000546735 AMPHP49418 695 aa20.02■□□□□ 0.8
TROAP-203ENST00000546735 RRS1Q15050 365 aaKnown RBP20.01■□□□□ 0.79
TROAP-203ENST00000546735 PDGFDQ9GZP0 370 aaPredicted RBP20■□□□□ 0.79
TROAP-203ENST00000546735 DDX54Q8TDD1 881 aaKnown RBP19.99■□□□□ 0.79
TROAP-203ENST00000546735 SPON1Q9HCB6 807 aa19.99■□□□□ 0.79
TROAP-203ENST00000546735 NHSQ6T4R5 1651 aa19.97■□□□□ 0.79
TROAP-203ENST00000546735 CDCA8Q53HL2 280 aa19.97■□□□□ 0.79
TROAP-203ENST00000546735 STK32BQ9NY57 414 aa19.96■□□□□ 0.79
TROAP-203ENST00000546735 PPP1R1BQ9UD71 204 aaPredicted RBP19.96■□□□□ 0.79
TROAP-203ENST00000546735 TIMELESSQ9UNS1 1208 aa19.96■□□□□ 0.79
TROAP-203ENST00000546735 USHBP1Q8N6Y0 703 aa19.95■□□□□ 0.78
TROAP-203ENST00000546735 CARD14Q9BXL6 1004 aa19.95■□□□□ 0.78
TROAP-203ENST00000546735 ZBTB7AO95365 584 aa19.94■□□□□ 0.78
TROAP-203ENST00000546735 SLC15A2Q16348 729 aa19.94■□□□□ 0.78
TROAP-203ENST00000546735 NBPF6Q5VWK0 638 aa19.94■□□□□ 0.78
TROAP-203ENST00000546735 NBPF4Q96M43 638 aa19.94■□□□□ 0.78
TROAP-203ENST00000546735 FAM208AQ9UK61 1670 aaKnown RBP19.93■□□□□ 0.78
TROAP-203ENST00000546735 RTL1A6NKG5 1358 aa19.93■□□□□ 0.78
TROAP-203ENST00000546735 CASZ1Q86V15 1759 aa19.93■□□□□ 0.78
TROAP-203ENST00000546735 MEGF6O75095 1541 aa19.92■□□□□ 0.78
TROAP-203ENST00000546735 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
TROAP-203ENST00000546735 RGPD2P0DJD1 1756 aa19.92■□□□□ 0.78
TROAP-203ENST00000546735 NSD3Q9BZ95 1437 aa19.92■□□□□ 0.78
TROAP-203ENST00000546735 HSP90AB2PQ58FF8 381 aa19.91■□□□□ 0.78
TROAP-203ENST00000546735 ZCRB1Q8TBF4 217 aaKnown RBP19.91■□□□□ 0.78
TROAP-203ENST00000546735 ATF5Q9Y2D1 282 aaPredicted RBP19.91■□□□□ 0.78
TROAP-203ENST00000546735 MYOM1P52179 1685 aa19.91■□□□□ 0.78
TROAP-203ENST00000546735 BTAF1O14981 1849 aa19.9■□□□□ 0.78
TROAP-203ENST00000546735 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
TROAP-203ENST00000546735 POLR3GLQ9BT43 218 aa19.9■□□□□ 0.78
TROAP-203ENST00000546735 KIF20BQ96Q89 1820 aa19.89■□□□□ 0.77
TROAP-203ENST00000546735 LRRC4BQ9NT99 713 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms