RNA–Protein interactions for RNA: ENST00000544583.6

ABR-205, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 5,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-205ENST00000544583 PDZRN3Q9UPQ7 1066 aa17.62■□□□□ 0.41
ABR-205ENST00000544583 PTCD1O75127 700 aaKnown RBP17.62■□□□□ 0.41
ABR-205ENST00000544583 STARD3NLO95772 234 aa17.62■□□□□ 0.41
ABR-205ENST00000544583 USHBP1Q8N6Y0 703 aa17.62■□□□□ 0.41
ABR-205ENST00000544583 DHX29Q7Z478 1369 aaKnown RBP17.62■□□□□ 0.41
ABR-205ENST00000544583 CHMP5Q9NZZ3 219 aa17.61■□□□□ 0.41
ABR-205ENST00000544583 SLC3A2P08195 630 aaKnown RBP17.61■□□□□ 0.41
ABR-205ENST00000544583 TMPOP42166 694 aaKnown RBP17.61■□□□□ 0.41
ABR-205ENST00000544583 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
ABR-205ENST00000544583 BRMS1Q9HCU9 246 aa17.61■□□□□ 0.41
ABR-205ENST00000544583 RRP12Q5JTH9 1297 aaKnown RBP17.61■□□□□ 0.41
ABR-205ENST00000544583 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.61■□□□□ 0.41
ABR-205ENST00000544583 MIS18AQ9NYP9 233 aa17.61■□□□□ 0.41
ABR-205ENST00000544583 XBP1P17861 261 aa17.61■□□□□ 0.41
ABR-205ENST00000544583 LRRCC1Q9C099 1032 aa17.61■□□□□ 0.41
ABR-205ENST00000544583 ANO8Q9HCE9 1232 aaPredicted RBP17.61■□□□□ 0.41
ABR-205ENST00000544583 TMOD3Q9NYL9 352 aa17.61■□□□□ 0.41
ABR-205ENST00000544583 MCM10Q7L590 875 aa17.6■□□□□ 0.41
ABR-205ENST00000544583 NOS1P29475 1434 aa17.6■□□□□ 0.41
ABR-205ENST00000544583 KDM4AO75164 1064 aa17.6■□□□□ 0.41
ABR-205ENST00000544583 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
ABR-205ENST00000544583 PCMTD1Q96MG8 357 aaPredicted RBP17.6■□□□□ 0.41
ABR-205ENST00000544583 NUCB2P80303 420 aa17.59■□□□□ 0.41
ABR-205ENST00000544583 PRM3Q9NNZ6 103 aa17.59■□□□□ 0.41
ABR-205ENST00000544583 THUMPD2Q9BTF0 503 aaKnown RBP17.59■□□□□ 0.41
ABR-205ENST00000544583 SRGAP3O43295 1099 aa17.58■□□□□ 0.41
ABR-205ENST00000544583 ANKRD20A12PQ8NF67 263 aa17.58■□□□□ 0.41
ABR-205ENST00000544583 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
ABR-205ENST00000544583 EMILIN1Q9Y6C2 1016 aa17.58■□□□□ 0.4
ABR-205ENST00000544583 MAP3K1Q13233 1512 aa17.58■□□□□ 0.4
ABR-205ENST00000544583 ASXL2Q76L83 1435 aa17.57■□□□□ 0.4
ABR-205ENST00000544583 CCDC73Q6ZRK6 1079 aa17.57■□□□□ 0.4
ABR-205ENST00000544583 CCDC85AQ96PX6 553 aaPredicted RBP17.57■□□□□ 0.4
ABR-205ENST00000544583 TNRQ92752 1358 aa17.57■□□□□ 0.4
ABR-205ENST00000544583 AMOTQ4VCS5 1084 aa17.56■□□□□ 0.4
ABR-205ENST00000544583 KRT28Q7Z3Y7 464 aa17.56■□□□□ 0.4
ABR-205ENST00000544583 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.56■□□□□ 0.4
ABR-205ENST00000544583 BIVM-ERCC5R4GMW8 1640 aa17.56■□□□□ 0.4
ABR-205ENST00000544583 DCTN1Q14203 1278 aa17.56■□□□□ 0.4
ABR-205ENST00000544583 MVPQ14764 893 aaKnown RBP17.56■□□□□ 0.4
ABR-205ENST00000544583 VSIG10Q8N0Z9 540 aa17.56■□□□□ 0.4
ABR-205ENST00000544583 CEP126Q9P2H0 1117 aa17.56■□□□□ 0.4
ABR-205ENST00000544583 CCDC184Q52MB2 194 aa17.56■□□□□ 0.4
ABR-205ENST00000544583 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
ABR-205ENST00000544583 DUSP27Q5VZP5 1158 aa17.55■□□□□ 0.4
ABR-205ENST00000544583 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
ABR-205ENST00000544583 NEK4P51957 841 aa17.55■□□□□ 0.4
ABR-205ENST00000544583 FKBP4Q02790 459 aaKnown RBP eCLIP17.55■□□□□ 0.4
ABR-205ENST00000544583 AACSQ86V21 672 aa17.55■□□□□ 0.4
ABR-205ENST00000544583 A0A0U1RQG5 324 aaPredicted RBP17.55■□□□□ 0.4
ABR-205ENST00000544583 RBM5P52756 815 aaKnown RBP eCLIP17.55■□□□□ 0.4
ABR-205ENST00000544583 MPRIPQ6WCQ1 1025 aa17.55■□□□□ 0.4
ABR-205ENST00000544583 NACAP1Q9BZK3 213 aa17.55■□□□□ 0.4
ABR-205ENST00000544583 ATP2B2Q01814 1243 aa17.54■□□□□ 0.4
ABR-205ENST00000544583 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
ABR-205ENST00000544583 HMGB2P26583 209 aaKnown RBP17.54■□□□□ 0.4
ABR-205ENST00000544583 C14orf93Q9H972 538 aaKnown RBP17.54■□□□□ 0.4
ABR-205ENST00000544583 MAP4K4O95819 1239 aaPredicted RBP17.54■□□□□ 0.4
ABR-205ENST00000544583 STK11IPQ8N1F8 1099 aa17.53■□□□□ 0.4
ABR-205ENST00000544583 TEX14Q8IWB6 1497 aa17.53■□□□□ 0.4
ABR-205ENST00000544583 KDM5BQ9UGL1 1544 aa17.53■□□□□ 0.4
ABR-205ENST00000544583 IGHMBP2P38935 993 aaKnown RBP17.53■□□□□ 0.4
ABR-205ENST00000544583 GSE1Q14687 1217 aa17.53■□□□□ 0.4
ABR-205ENST00000544583 CADPS2Q86UW7 1296 aa17.53■□□□□ 0.4
ABR-205ENST00000544583 GPATCH8Q9UKJ3 1502 aaKnown RBP17.53■□□□□ 0.4
ABR-205ENST00000544583 TAF7Q15545 349 aaPredicted RBP17.53■□□□□ 0.4
ABR-205ENST00000544583 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
ABR-205ENST00000544583 ZNF652Q9Y2D9 606 aa17.52■□□□□ 0.4
ABR-205ENST00000544583 ZPR1O75312 459 aa17.52■□□□□ 0.39
ABR-205ENST00000544583 IPO7O95373 1038 aaKnown RBP17.52■□□□□ 0.39
ABR-205ENST00000544583 ATP2B1P20020 1258 aa17.52■□□□□ 0.39
ABR-205ENST00000544583 SASS6Q6UVJ0 657 aa17.52■□□□□ 0.39
ABR-205ENST00000544583 PLCH2O75038 1416 aa17.51■□□□□ 0.39
ABR-205ENST00000544583 ATP10BO94823 1461 aa17.51■□□□□ 0.39
ABR-205ENST00000544583 ZSCAN25Q6NSZ9 544 aa17.51■□□□□ 0.39
ABR-205ENST00000544583 IL1RAPL2Q9NP60 686 aa17.5■□□□□ 0.39
ABR-205ENST00000544583 EXOC5O00471 708 aa17.5■□□□□ 0.39
ABR-205ENST00000544583 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
ABR-205ENST00000544583 RAPGEF6Q8TEU7 1601 aa17.49■□□□□ 0.39
ABR-205ENST00000544583 SLFN5Q08AF3 891 aa17.49■□□□□ 0.39
ABR-205ENST00000544583 IFT57Q9NWB7 429 aa17.49■□□□□ 0.39
ABR-205ENST00000544583 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
ABR-205ENST00000544583 RAI14Q9P0K7 980 aa17.49■□□□□ 0.39
ABR-205ENST00000544583 ACEP12821 1306 aa17.48■□□□□ 0.39
ABR-205ENST00000544583 LARP1Q6PKG0 1096 aaKnown RBP17.48■□□□□ 0.39
ABR-205ENST00000544583 CCAR2Q8N163 923 aaKnown RBP17.48■□□□□ 0.39
ABR-205ENST00000544583 C11orf95C9JLR9 678 aaPredicted RBP17.47■□□□□ 0.39
ABR-205ENST00000544583 RPAP2Q8IXW5 612 aaPredicted RBP17.47■□□□□ 0.39
ABR-205ENST00000544583 CHD1LQ86WJ1 897 aa17.47■□□□□ 0.39
ABR-205ENST00000544583 ZSCAN29Q8IWY8 852 aaPredicted RBP17.47■□□□□ 0.39
ABR-205ENST00000544583 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
ABR-205ENST00000544583 SDF4Q9BRK5 362 aa17.47■□□□□ 0.39
ABR-205ENST00000544583 LRP2BPQ9P2M1 347 aa17.47■□□□□ 0.39
ABR-205ENST00000544583 RABEP1Q15276 862 aa17.47■□□□□ 0.39
ABR-205ENST00000544583 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
ABR-205ENST00000544583 MCM2P49736 904 aa17.47■□□□□ 0.39
ABR-205ENST00000544583 MYD88Q99836 296 aa17.47■□□□□ 0.39
ABR-205ENST00000544583 GOLGA6L1Q8N7Z2 621 aa17.46■□□□□ 0.39
ABR-205ENST00000544583 MSH6P52701 1360 aa17.46■□□□□ 0.39
ABR-205ENST00000544583 PDCP20941 246 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms