RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 ZNF692Q9BU19 519 aaPredicted RBP23.67■■□□□ 1.38
COPS7A-215ENST00000543155 ZRANB1Q9UGI0 708 aa23.67■■□□□ 1.38
COPS7A-215ENST00000543155 ADAMTS13Q76LX8 1427 aa23.66■■□□□ 1.38
COPS7A-215ENST00000543155 ROBO2Q9HCK4 1378 aa23.65■■□□□ 1.38
COPS7A-215ENST00000543155 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.65■■□□□ 1.38
COPS7A-215ENST00000543155 NCKAP5LQ9HCH0 1330 aa23.65■■□□□ 1.38
COPS7A-215ENST00000543155 IFT57Q9NWB7 429 aa23.65■■□□□ 1.38
COPS7A-215ENST00000543155 PRR36Q9H6K5 1346 aa23.64■■□□□ 1.38
COPS7A-215ENST00000543155 GNAI1P63096 354 aa23.64■■□□□ 1.37
COPS7A-215ENST00000543155 UPF2Q9HAU5 1272 aaKnown RBP23.63■■□□□ 1.37
COPS7A-215ENST00000543155 ZBTB40Q9NUA8 1239 aa23.63■■□□□ 1.37
COPS7A-215ENST00000543155 PLEKHG1Q9ULL1 1385 aa23.63■■□□□ 1.37
COPS7A-215ENST00000543155 LMOD3Q0VAK6 560 aa23.63■■□□□ 1.37
COPS7A-215ENST00000543155 NFKBIBQ15653 356 aa23.61■■□□□ 1.37
COPS7A-215ENST00000543155 PTCH1Q13635 1447 aa23.6■■□□□ 1.37
COPS7A-215ENST00000543155 ZNF853P0CG23 659 aa23.6■■□□□ 1.37
COPS7A-215ENST00000543155 RRS1Q15050 365 aaKnown RBP23.6■■□□□ 1.37
COPS7A-215ENST00000543155 SMC5Q8IY18 1101 aa23.6■■□□□ 1.37
COPS7A-215ENST00000543155 NALCNQ8IZF0 1738 aa23.6■■□□□ 1.37
COPS7A-215ENST00000543155 BECN1Q14457 450 aa23.6■■□□□ 1.37
COPS7A-215ENST00000543155 THUMPD2Q9BTF0 503 aaKnown RBP23.59■■□□□ 1.37
COPS7A-215ENST00000543155 VAMP4O75379 141 aa23.59■■□□□ 1.37
COPS7A-215ENST00000543155 MRPL50Q8N5N7 158 aaKnown RBP23.58■■□□□ 1.37
COPS7A-215ENST00000543155 ARHGAP45Q92619 1136 aa23.58■■□□□ 1.37
COPS7A-215ENST00000543155 TBC1D32Q96NH3 1257 aa23.58■■□□□ 1.37
COPS7A-215ENST00000543155 PIK3R4Q99570 1358 aa23.58■■□□□ 1.37
COPS7A-215ENST00000543155 MBIPQ9NS73 344 aa23.57■■□□□ 1.36
COPS7A-215ENST00000543155 OVOS2A0A0J9YW53 1432 aa23.57■■□□□ 1.36
COPS7A-215ENST00000543155 OVOS2Q6IE36 1432 aa23.57■■□□□ 1.36
COPS7A-215ENST00000543155 CHMP4BQ9H444 224 aaKnown RBP23.56■■□□□ 1.36
COPS7A-215ENST00000543155 TTC21BQ7Z4L5 1316 aa23.56■■□□□ 1.36
COPS7A-215ENST00000543155 CFAP44Q96MT7 982 aa23.55■■□□□ 1.36
COPS7A-215ENST00000543155 USP6P35125 1406 aa23.54■■□□□ 1.36
COPS7A-215ENST00000543155 PLEKHG3A1L390 1219 aa23.54■■□□□ 1.36
COPS7A-215ENST00000543155 TSPYL6Q8N831 410 aa23.53■■□□□ 1.36
COPS7A-215ENST00000543155 ACEP12821 1306 aa23.53■■□□□ 1.36
COPS7A-215ENST00000543155 LTKP29376 864 aa23.53■■□□□ 1.36
COPS7A-215ENST00000543155 RGPD1P0DJD0 1748 aa23.52■■□□□ 1.36
COPS7A-215ENST00000543155 PEAK1Q9H792 1746 aa23.52■■□□□ 1.36
COPS7A-215ENST00000543155 TWISTNBQ3B726 338 aaPredicted RBP23.51■■□□□ 1.35
COPS7A-215ENST00000543155 SLIT1O75093 1534 aa23.51■■□□□ 1.35
COPS7A-215ENST00000543155 PTPRUQ92729 1446 aa23.51■■□□□ 1.35
COPS7A-215ENST00000543155 NUCB1Q02818 461 aa23.51■■□□□ 1.35
COPS7A-215ENST00000543155 ABCC4O15439 1325 aa23.5■■□□□ 1.35
COPS7A-215ENST00000543155 EIF4A2Q14240 407 aaKnown RBP23.5■■□□□ 1.35
COPS7A-215ENST00000543155 ZBTB7BO15156 539 aaPredicted RBP23.49■■□□□ 1.35
COPS7A-215ENST00000543155 ARHGAP23Q9P227 1491 aa23.49■■□□□ 1.35
COPS7A-215ENST00000543155 FMN2Q9NZ56 1722 aa23.49■■□□□ 1.35
COPS7A-215ENST00000543155 USP31Q70CQ4 1352 aa23.48■■□□□ 1.35
COPS7A-215ENST00000543155 EID1Q9Y6B2 187 aa23.48■■□□□ 1.35
COPS7A-215ENST00000543155 FAM83GA6ND36 823 aa23.47■■□□□ 1.35
COPS7A-215ENST00000543155 C8orf58Q8NAV2 365 aa23.47■■□□□ 1.35
COPS7A-215ENST00000543155 ELL2O00472 640 aaPredicted RBP23.47■■□□□ 1.35
COPS7A-215ENST00000543155 SSH2Q76I76 1423 aa23.47■■□□□ 1.35
COPS7A-215ENST00000543155 DIP2AQ14689 1571 aa23.46■■□□□ 1.35
COPS7A-215ENST00000543155 RIMS1Q86UR5 1692 aaKnown RBP23.46■■□□□ 1.35
COPS7A-215ENST00000543155 API5Q9BZZ5 524 aaKnown RBP23.46■■□□□ 1.35
COPS7A-215ENST00000543155 SULT6B1Q6IMI4 303 aa23.45■■□□□ 1.35
COPS7A-215ENST00000543155 CHD1LQ86WJ1 897 aa23.45■■□□□ 1.34
COPS7A-215ENST00000543155 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.34
COPS7A-215ENST00000543155 GCC1Q96CN9 775 aa23.45■■□□□ 1.34
COPS7A-215ENST00000543155 FER1L4A9Z1Z3 1794 aa23.45■■□□□ 1.34
COPS7A-215ENST00000543155 KIF24Q5T7B8 1368 aa23.44■■□□□ 1.34
COPS7A-215ENST00000543155 DCTN1Q14203 1278 aa23.44■■□□□ 1.34
COPS7A-215ENST00000543155 SLC26A8Q96RN1 970 aa23.44■■□□□ 1.34
COPS7A-215ENST00000543155 NUTM2FA1L443 756 aa23.43■■□□□ 1.34
COPS7A-215ENST00000543155 FRAT2O75474 233 aaPredicted RBP23.43■■□□□ 1.34
COPS7A-215ENST00000543155 GSE1Q14687 1217 aa23.43■■□□□ 1.34
COPS7A-215ENST00000543155 C22orf23Q9BZE7 217 aa23.43■■□□□ 1.34
COPS7A-215ENST00000543155 TTC21AQ8NDW8 1320 aa23.43■■□□□ 1.34
COPS7A-215ENST00000543155 CEBPAP49715 358 aaPredicted RBP23.42■■□□□ 1.34
COPS7A-215ENST00000543155 HAP1P54257 671 aaPredicted RBP23.42■■□□□ 1.34
COPS7A-215ENST00000543155 MFAP1P55081 439 aaKnown RBP23.42■■□□□ 1.34
COPS7A-215ENST00000543155 LNPKQ9C0E8 428 aa23.42■■□□□ 1.34
COPS7A-215ENST00000543155 TBC1D2Q9BYX2 928 aa23.41■■□□□ 1.34
COPS7A-215ENST00000543155 ARHGEF10O15013 1369 aa23.41■■□□□ 1.34
COPS7A-215ENST00000543155 AMOTL2Q9Y2J4 779 aa23.41■■□□□ 1.34
COPS7A-215ENST00000543155 TBX22Q9Y458 520 aa23.41■■□□□ 1.34
COPS7A-215ENST00000543155 C1orf115Q9H7X2 142 aa23.39■■□□□ 1.34
COPS7A-215ENST00000543155 RGPD8O14715 1765 aaPredicted RBP23.39■■□□□ 1.34
COPS7A-215ENST00000543155 XRN1Q8IZH2 1706 aaKnown RBP23.39■■□□□ 1.34
COPS7A-215ENST00000543155 KIAA0232Q92628 1395 aa23.39■■□□□ 1.33
COPS7A-215ENST00000543155 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.33
COPS7A-215ENST00000543155 SLKQ9H2G2 1235 aaPredicted RBP23.38■■□□□ 1.33
COPS7A-215ENST00000543155 ANTXR1Q9H6X2 564 aa23.38■■□□□ 1.33
COPS7A-215ENST00000543155 CHL1O00533 1208 aa23.37■■□□□ 1.33
COPS7A-215ENST00000543155 BMP2KLQ5H9B9 411 aa23.37■■□□□ 1.33
COPS7A-215ENST00000543155 PIK3C2AO00443 1686 aa23.37■■□□□ 1.33
COPS7A-215ENST00000543155 ANKRD45Q5TZF3 282 aa23.36■■□□□ 1.33
COPS7A-215ENST00000543155 SBNO1A3KN83 1393 aa23.36■■□□□ 1.33
COPS7A-215ENST00000543155 FLT4P35916 1363 aa23.36■■□□□ 1.33
COPS7A-215ENST00000543155 SIRT2Q8IXJ6 389 aa23.35■■□□□ 1.33
COPS7A-215ENST00000543155 MAP3K19Q56UN5 1328 aa23.34■■□□□ 1.33
COPS7A-215ENST00000543155 MCM10Q7L590 875 aa23.34■■□□□ 1.33
COPS7A-215ENST00000543155 CRB1P82279 1406 aa23.34■■□□□ 1.33
COPS7A-215ENST00000543155 INTS3Q68E01 1043 aaKnown RBP23.33■■□□□ 1.33
COPS7A-215ENST00000543155 RGS12O14924 1447 aa23.33■■□□□ 1.33
COPS7A-215ENST00000543155 THEMISQ8N1K5 641 aaPredicted RBP23.32■■□□□ 1.32
COPS7A-215ENST00000543155 ANKARQ7Z5J8 1434 aa23.32■■□□□ 1.32
COPS7A-215ENST00000543155 SOX12O15370 315 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms