RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 DDB1Q16531 1140 aa9.8□□□□□ -0.84
LRP6-206ENST00000543091 C9orf78Q9NZ63 289 aaPredicted RBP9.8□□□□□ -0.84
LRP6-206ENST00000543091 ANKARQ7Z5J8 1434 aa9.8□□□□□ -0.84
LRP6-206ENST00000543091 BTBD11A6QL63 1104 aa9.79□□□□□ -0.84
LRP6-206ENST00000543091 RIC3Q7Z5B4 369 aa9.79□□□□□ -0.84
LRP6-206ENST00000543091 RWDD1Q9H446 243 aaPredicted RBP9.79□□□□□ -0.84
LRP6-206ENST00000543091 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
LRP6-206ENST00000543091 IL2RBP14784 551 aa9.79□□□□□ -0.84
LRP6-206ENST00000543091 KIF6Q6ZMV9 814 aa9.79□□□□□ -0.84
LRP6-206ENST00000543091 ZCRB1Q8TBF4 217 aaKnown RBP9.79□□□□□ -0.84
LRP6-206ENST00000543091 ALKQ9UM73 1620 aa9.79□□□□□ -0.84
LRP6-206ENST00000543091 G3V3G9 751 aa9.79□□□□□ -0.84
LRP6-206ENST00000543091 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
LRP6-206ENST00000543091 POLKQ9UBT6 870 aa9.79□□□□□ -0.84
LRP6-206ENST00000543091 BCL2L13Q9BXK5 485 aa9.79□□□□□ -0.84
LRP6-206ENST00000543091 MAP3K19Q56UN5 1328 aa9.78□□□□□ -0.84
LRP6-206ENST00000543091 STARD3NLO95772 234 aa9.78□□□□□ -0.84
LRP6-206ENST00000543091 HDGFL1Q5TGJ6 251 aa9.78□□□□□ -0.84
LRP6-206ENST00000543091 DDX17Q92841 729 aaKnown RBP9.78□□□□□ -0.84
LRP6-206ENST00000543091 CARD14Q9BXL6 1004 aa9.78□□□□□ -0.84
LRP6-206ENST00000543091 GORABQ5T7V8 394 aa9.78□□□□□ -0.84
LRP6-206ENST00000543091 PREX1Q8TCU6 1659 aa9.78□□□□□ -0.84
LRP6-206ENST00000543091 PIK3C2BO00750 1634 aa9.78□□□□□ -0.84
LRP6-206ENST00000543091 NPC1L1Q9UHC9 1359 aa9.78□□□□□ -0.84
LRP6-206ENST00000543091 KIF13AQ9H1H9 1805 aa9.77□□□□□ -0.84
LRP6-206ENST00000543091 TWISTNBQ3B726 338 aaPredicted RBP9.77□□□□□ -0.84
LRP6-206ENST00000543091 SBNO1A3KN83 1393 aa9.77□□□□□ -0.85
LRP6-206ENST00000543091 HOXC9P31274 260 aa9.77□□□□□ -0.85
LRP6-206ENST00000543091 AIMP1Q12904 312 aaKnown RBP9.77□□□□□ -0.85
LRP6-206ENST00000543091 TAF7Q15545 349 aaPredicted RBP9.77□□□□□ -0.85
LRP6-206ENST00000543091 CT47B1P0C2W7 299 aaPredicted RBP9.77□□□□□ -0.85
LRP6-206ENST00000543091 ERICH6BQ5W0A0 696 aa9.77□□□□□ -0.85
LRP6-206ENST00000543091 MPRIPQ6WCQ1 1025 aa9.77□□□□□ -0.85
LRP6-206ENST00000543091 DCAF8L1A6NGE4 600 aa9.76□□□□□ -0.85
LRP6-206ENST00000543091 EIF4A2Q14240 407 aaKnown RBP9.76□□□□□ -0.85
LRP6-206ENST00000543091 BRINP3Q76B58 766 aa9.76□□□□□ -0.85
LRP6-206ENST00000543091 USP21Q9UK80 565 aa9.76□□□□□ -0.85
LRP6-206ENST00000543091 TCERG1O14776 1098 aaKnown RBP9.76□□□□□ -0.85
LRP6-206ENST00000543091 ATP7BP35670 1465 aa9.76□□□□□ -0.85
LRP6-206ENST00000543091 HSP90AA1P07900 732 aaKnown RBP9.76□□□□□ -0.85
LRP6-206ENST00000543091 FBLN1P23142 703 aa9.76□□□□□ -0.85
LRP6-206ENST00000543091 ANP32AP39687 249 aaKnown RBP9.76□□□□□ -0.85
LRP6-206ENST00000543091 ZNF428Q96B54 188 aa9.75□□□□□ -0.85
LRP6-206ENST00000543091 GPATCH3Q96I76 525 aa9.75□□□□□ -0.85
LRP6-206ENST00000543091 CFAP44Q96MT7 982 aa9.75□□□□□ -0.85
LRP6-206ENST00000543091 TEX13AQ9BXU3 409 aaPredicted RBP9.75□□□□□ -0.85
LRP6-206ENST00000543091 LAMC1P11047 1609 aa9.75□□□□□ -0.85
LRP6-206ENST00000543091 PTCH1Q13635 1447 aa9.75□□□□□ -0.85
LRP6-206ENST00000543091 EXOSC9Q06265 439 aaKnown RBP9.75□□□□□ -0.85
LRP6-206ENST00000543091 SMARCC1Q92922 1105 aaPredicted RBP9.75□□□□□ -0.85
LRP6-206ENST00000543091 VWDEQ8N2E2 1590 aa9.75□□□□□ -0.85
LRP6-206ENST00000543091 KDM5AP29375 1690 aaKnown RBP9.75□□□□□ -0.85
LRP6-206ENST00000543091 POLR3AO14802 1390 aaPredicted RBP9.75□□□□□ -0.85
LRP6-206ENST00000543091 DEPDC5O75140 1603 aa9.74□□□□□ -0.85
LRP6-206ENST00000543091 PTCD1O75127 700 aaKnown RBP9.74□□□□□ -0.85
LRP6-206ENST00000543091 DZIP1LQ8IYY4 767 aaKnown RBP9.74□□□□□ -0.85
LRP6-206ENST00000543091 DDX19BQ9UMR2 479 aa9.74□□□□□ -0.85
LRP6-206ENST00000543091 APBB1O00213 710 aa9.74□□□□□ -0.85
LRP6-206ENST00000543091 MCM10Q7L590 875 aa9.74□□□□□ -0.85
LRP6-206ENST00000543091 KLHL34Q8N239 644 aa9.74□□□□□ -0.85
LRP6-206ENST00000543091 FMNL2Q96PY5 1086 aa9.74□□□□□ -0.85
LRP6-206ENST00000543091 PARD3Q8TEW0 1356 aa9.73□□□□□ -0.85
LRP6-206ENST00000543091 PRR36Q9H6K5 1346 aa9.73□□□□□ -0.85
LRP6-206ENST00000543091 IFT57Q9NWB7 429 aa9.73□□□□□ -0.85
LRP6-206ENST00000543091 AKAP4Q5JQC9 854 aa9.73□□□□□ -0.85
LRP6-206ENST00000543091 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
LRP6-206ENST00000543091 HTATSF1O43719 755 aaKnown RBP9.73□□□□□ -0.85
LRP6-206ENST00000543091 ZNF772Q68DY9 489 aaPredicted RBP9.73□□□□□ -0.85
LRP6-206ENST00000543091 NEXMIFQ5QGS0 1516 aa9.73□□□□□ -0.85
LRP6-206ENST00000543091 USP6P35125 1406 aa9.73□□□□□ -0.85
LRP6-206ENST00000543091 ADAMTS13Q76LX8 1427 aa9.73□□□□□ -0.85
LRP6-206ENST00000543091 FRAT2O75474 233 aaPredicted RBP9.72□□□□□ -0.85
LRP6-206ENST00000543091 RGS3P49796 1198 aa9.72□□□□□ -0.85
LRP6-206ENST00000543091 EYA1Q99502 592 aa9.72□□□□□ -0.85
LRP6-206ENST00000543091 PCDH11XQ9BZA7 1347 aa9.72□□□□□ -0.85
LRP6-206ENST00000543091 PCDH11YQ9BZA8 1340 aa9.72□□□□□ -0.85
LRP6-206ENST00000543091 WWC1Q8IX03 1113 aa9.72□□□□□ -0.85
LRP6-206ENST00000543091 TRPC5Q9UL62 973 aaPredicted RBP9.72□□□□□ -0.85
LRP6-206ENST00000543091 TSR2Q969E8 191 aaKnown RBP9.72□□□□□ -0.85
LRP6-206ENST00000543091 ZNF652Q9Y2D9 606 aa9.72□□□□□ -0.85
LRP6-206ENST00000543091 SETBP1Q9Y6X0 1596 aa9.72□□□□□ -0.85
LRP6-206ENST00000543091 BCORL1Q5H9F3 1711 aa9.72□□□□□ -0.85
LRP6-206ENST00000543091 SLC4A2P04920 1241 aa9.71□□□□□ -0.85
LRP6-206ENST00000543091 SPATA31A3Q5VYP0 1347 aa9.71□□□□□ -0.86
LRP6-206ENST00000543091 NCOA3Q9Y6Q9 1424 aa9.71□□□□□ -0.86
LRP6-206ENST00000543091 GNAI3P08754 354 aa9.71□□□□□ -0.86
LRP6-206ENST00000543091 KCNJ4P48050 445 aa9.71□□□□□ -0.86
LRP6-206ENST00000543091 NKTRP30414 1462 aaKnown RBP9.71□□□□□ -0.86
LRP6-206ENST00000543091 DIP2AQ14689 1571 aa9.71□□□□□ -0.86
LRP6-206ENST00000543091 RRP1P56182 461 aaKnown RBP9.7□□□□□ -0.86
LRP6-206ENST00000543091 RTL5Q5HYW3 569 aaPredicted RBP9.7□□□□□ -0.86
LRP6-206ENST00000543091 DCAF5Q96JK2 942 aa9.7□□□□□ -0.86
LRP6-206ENST00000543091 DCTN1Q14203 1278 aa9.7□□□□□ -0.86
LRP6-206ENST00000543091 CCDC184Q52MB2 194 aa9.7□□□□□ -0.86
LRP6-206ENST00000543091 BCL11BQ9C0K0 894 aaPredicted RBP9.7□□□□□ -0.86
LRP6-206ENST00000543091 ZPR1O75312 459 aa9.7□□□□□ -0.86
LRP6-206ENST00000543091 UBTFL1P0CB47 393 aaPredicted RBP9.7□□□□□ -0.86
LRP6-206ENST00000543091 AAMPQ13685 434 aa9.7□□□□□ -0.86
LRP6-206ENST00000543091 THUMPD2Q9BTF0 503 aaKnown RBP9.7□□□□□ -0.86
LRP6-206ENST00000543091 DLC1Q96QB1 1528 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms