RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 BPHLQ86WA6 291 aaPredicted RBP14.57□□□□□ -0.08
MRPS35-204ENST00000542199 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
MRPS35-204ENST00000542199 ERFEQ4G0M1 354 aa14.56□□□□□ -0.08
MRPS35-204ENST00000542199 PIK3CDO00329 1044 aa14.54□□□□□ -0.08
MRPS35-204ENST00000542199 RPIAP49247 311 aa14.53□□□□□ -0.08
MRPS35-204ENST00000542199 C1QTNF2Q9BXJ5 285 aa14.52□□□□□ -0.09
MRPS35-204ENST00000542199 PPP1R12CQ9BZL4 782 aa14.52□□□□□ -0.09
MRPS35-204ENST00000542199 CFAP70Q5T0N1 1121 aa14.51□□□□□ -0.09
MRPS35-204ENST00000542199 TBC1D9Q6ZT07 1266 aa14.51□□□□□ -0.09
MRPS35-204ENST00000542199 A0A0G2JS52 829 aa14.5□□□□□ -0.09
MRPS35-204ENST00000542199 PALM3A6NDB9 673 aaPredicted RBP14.5□□□□□ -0.09
MRPS35-204ENST00000542199 WNT7BP56706 349 aa14.5□□□□□ -0.09
MRPS35-204ENST00000542199 ARXQ96QS3 562 aa14.5□□□□□ -0.09
MRPS35-204ENST00000542199 CCDC88BA6NC98 1476 aa14.5□□□□□ -0.09
MRPS35-204ENST00000542199 DZIP3Q86Y13 1208 aaKnown RBP14.49□□□□□ -0.09
MRPS35-204ENST00000542199 FAM174AQ8TBP5 190 aa14.49□□□□□ -0.09
MRPS35-204ENST00000542199 CEP126Q9P2H0 1117 aa14.49□□□□□ -0.09
MRPS35-204ENST00000542199 TFIP11Q9UBB9 837 aaKnown RBP14.49□□□□□ -0.09
MRPS35-204ENST00000542199 RFX1P22670 979 aa14.48□□□□□ -0.09
MRPS35-204ENST00000542199 SLC10A4Q96EP9 437 aa14.47□□□□□ -0.09
MRPS35-204ENST00000542199 SLC19A1P41440 591 aa14.46□□□□□ -0.09
MRPS35-204ENST00000542199 CD2BP2O95400 341 aaKnown RBP14.45□□□□□ -0.1
MRPS35-204ENST00000542199 RC3H1Q5TC82 1133 aaKnown RBP14.45□□□□□ -0.1
MRPS35-204ENST00000542199 MAFBQ9Y5Q3 323 aaPredicted RBP14.45□□□□□ -0.1
MRPS35-204ENST00000542199 URB2Q14146 1524 aaKnown RBP14.45□□□□□ -0.1
MRPS35-204ENST00000542199 LMOD1P29536 600 aaPredicted RBP14.44□□□□□ -0.1
MRPS35-204ENST00000542199 TRMT44Q8IYL2 757 aaKnown RBP14.44□□□□□ -0.1
MRPS35-204ENST00000542199 EHBP1Q8NDI1 1231 aa14.44□□□□□ -0.1
MRPS35-204ENST00000542199 ATP9BO43861 1147 aa14.43□□□□□ -0.1
MRPS35-204ENST00000542199 VARSP26640 1264 aaKnown RBP14.43□□□□□ -0.1
MRPS35-204ENST00000542199 HOMEZQ8IX15 550 aa14.43□□□□□ -0.1
MRPS35-204ENST00000542199 PHTF2Q8N3S3 785 aa14.43□□□□□ -0.1
MRPS35-204ENST00000542199 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.42□□□□□ -0.1
MRPS35-204ENST00000542199 GIGYF1O75420 1035 aaPredicted RBP14.42□□□□□ -0.1
MRPS35-204ENST00000542199 SKIP12755 728 aa14.42□□□□□ -0.1
MRPS35-204ENST00000542199 MCCD1P59942 119 aaPredicted RBP14.42□□□□□ -0.1
MRPS35-204ENST00000542199 SLFNL1Q499Z3 407 aa14.42□□□□□ -0.1
MRPS35-204ENST00000542199 RNF135Q8IUD6 432 aa14.42□□□□□ -0.1
MRPS35-204ENST00000542199 ZNF592Q92610 1267 aa14.42□□□□□ -0.1
MRPS35-204ENST00000542199 SPRYD7Q5W111 196 aa14.4□□□□□ -0.1
MRPS35-204ENST00000542199 TLL2Q9Y6L7 1015 aa14.4□□□□□ -0.1
MRPS35-204ENST00000542199 TSGA10IPQ3SY00 556 aa14.39□□□□□ -0.11
MRPS35-204ENST00000542199 DEPDC4Q8N2C3 294 aa14.39□□□□□ -0.11
MRPS35-204ENST00000542199 USP17L5A8MUK1 530 aa14.38□□□□□ -0.11
MRPS35-204ENST00000542199 NFATC2IPQ8NCF5 419 aa14.38□□□□□ -0.11
MRPS35-204ENST00000542199 CCDC85AQ96PX6 553 aaPredicted RBP14.38□□□□□ -0.11
MRPS35-204ENST00000542199 PRKD2Q9BZL6 878 aa14.38□□□□□ -0.11
MRPS35-204ENST00000542199 USP17L3A6NCW0 530 aa14.37□□□□□ -0.11
MRPS35-204ENST00000542199 USP17L4A6NCW7 530 aa14.37□□□□□ -0.11
MRPS35-204ENST00000542199 SRPK2P78362 688 aaKnown RBP14.37□□□□□ -0.11
MRPS35-204ENST00000542199 NBPF20Q3BBV1 942 aa14.37□□□□□ -0.11
MRPS35-204ENST00000542199 USP17L2Q6R6M4 530 aa14.37□□□□□ -0.11
MRPS35-204ENST00000542199 USP17L1Q7RTZ2 530 aa14.37□□□□□ -0.11
MRPS35-204ENST00000542199 PLPP7Q8NBV4 271 aa14.37□□□□□ -0.11
MRPS35-204ENST00000542199 ESPNB1AK53 854 aa14.36□□□□□ -0.11
MRPS35-204ENST00000542199 RAB15P59190 212 aa14.36□□□□□ -0.11
MRPS35-204ENST00000542199 ARID5BQ14865 1188 aa14.36□□□□□ -0.11
MRPS35-204ENST00000542199 CDCA8Q53HL2 280 aa14.36□□□□□ -0.11
MRPS35-204ENST00000542199 ZNF697Q5TEC3 545 aa14.36□□□□□ -0.11
MRPS35-204ENST00000542199 PBXIP1Q96AQ6 731 aa14.36□□□□□ -0.11
MRPS35-204ENST00000542199 MRGPRX2Q96LB1 330 aa14.36□□□□□ -0.11
MRPS35-204ENST00000542199 KCTD15Q96SI1 283 aaPredicted RBP14.36□□□□□ -0.11
MRPS35-204ENST00000542199 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
MRPS35-204ENST00000542199 WNT7AO00755 349 aa14.35□□□□□ -0.11
MRPS35-204ENST00000542199 SIAH2O43255 324 aa14.35□□□□□ -0.11
MRPS35-204ENST00000542199 VASH1Q7L8A9 365 aaPredicted RBP14.35□□□□□ -0.11
MRPS35-204ENST00000542199 CHIC2Q9UKJ5 165 aa14.35□□□□□ -0.11
MRPS35-204ENST00000542199 MAP4K5Q9Y4K4 846 aa14.34□□□□□ -0.11
MRPS35-204ENST00000542199 NCOA4Q13772 614 aa14.33□□□□□ -0.12
MRPS35-204ENST00000542199 TRAF7Q6Q0C0 670 aa14.33□□□□□ -0.12
MRPS35-204ENST00000542199 CDV3Q9UKY7 258 aaKnown RBP14.33□□□□□ -0.12
MRPS35-204ENST00000542199 INTS6LQ5JSJ4 861 aaKnown RBP14.32□□□□□ -0.12
MRPS35-204ENST00000542199 ZNF598Q86UK7 904 aaKnown RBP14.32□□□□□ -0.12
MRPS35-204ENST00000542199 FSHRP23945 695 aa14.31□□□□□ -0.12
MRPS35-204ENST00000542199 FOXC1Q12948 553 aa14.31□□□□□ -0.12
MRPS35-204ENST00000542199 PLEKHM2Q8IWE5 1019 aa14.31□□□□□ -0.12
MRPS35-204ENST00000542199 CDK15Q96Q40 435 aa14.31□□□□□ -0.12
MRPS35-204ENST00000542199 CDCA7Q9BWT1 371 aaPredicted RBP14.31□□□□□ -0.12
MRPS35-204ENST00000542199 PKD2L1Q9P0L9 805 aa14.31□□□□□ -0.12
MRPS35-204ENST00000542199 DOLKQ9UPQ8 538 aa14.31□□□□□ -0.12
MRPS35-204ENST00000542199 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
MRPS35-204ENST00000542199 PPP1R15AO75807 674 aaPredicted RBP14.3□□□□□ -0.12
MRPS35-204ENST00000542199 KANK4Q5T7N3 995 aaPredicted RBP14.3□□□□□ -0.12
MRPS35-204ENST00000542199 IFT140Q96RY7 1462 aa14.3□□□□□ -0.12
MRPS35-204ENST00000542199 GRM5P41594 1212 aa14.29□□□□□ -0.12
MRPS35-204ENST00000542199 OXLD1Q5BKU9 147 aa14.29□□□□□ -0.12
MRPS35-204ENST00000542199 PCDHB11Q9Y5F2 797 aa14.29□□□□□ -0.12
MRPS35-204ENST00000542199 V9GY48 417 aaPredicted RBP14.29□□□□□ -0.12
MRPS35-204ENST00000542199 ABCC8Q09428 1581 aa14.28□□□□□ -0.12
MRPS35-204ENST00000542199 RNF20Q5VTR2 975 aa14.28□□□□□ -0.12
MRPS35-204ENST00000542199 MAP7D1Q3KQU3 841 aa14.27□□□□□ -0.13
MRPS35-204ENST00000542199 SEPT12Q8IYM1 358 aa14.27□□□□□ -0.13
MRPS35-204ENST00000542199 RETREG2Q8NC44 543 aa14.27□□□□□ -0.13
MRPS35-204ENST00000542199 VRTNQ9H8Y1 702 aa14.26□□□□□ -0.13
MRPS35-204ENST00000542199 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
MRPS35-204ENST00000542199 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
MRPS35-204ENST00000542199 ERVH48-1M5A8F1 160 aa14.25□□□□□ -0.13
MRPS35-204ENST00000542199 ADH1CP00326 375 aa14.25□□□□□ -0.13
MRPS35-204ENST00000542199 MPNDQ8N594 471 aa14.25□□□□□ -0.13
MRPS35-204ENST00000542199 MKRN1Q9UHC7 482 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms